RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 ZNF277Q9NRM2 450 aaPredicted RBP13.17□□□□□ -0.3
TMEM200A-201ENST00000296978 KBTBD13C9JR72 458 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 KCNN4O15554 427 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 DESP17661 470 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 CACNA2D1P54289 1103 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 NCKAP1LP55160 1127 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 INHBEP58166 350 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 ACVR2BQ13705 512 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 WDR72Q3MJ13 1102 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 FNBP1LQ5T0N5 605 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 FAM102AQ5T9C2 384 aaPredicted RBP13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 MON1BQ7L1V2 547 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 SDCCAG8Q86SQ7 713 aaPredicted RBP13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 C10orf82Q8WW14 230 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 MTBPQ96DY7 904 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 CLPTM1LQ96KA5 538 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 CYP26B1Q9NR63 512 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 GRID1Q9ULK0 1009 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 SHOC2Q9UQ13 582 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 MTO1Q9Y2Z2 717 aaKnown RBP13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 MEI4A8MW99 385 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 NDC80O14777 642 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 FAM155BO75949 473 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 TNNC2P02585 160 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 KRT7P08729 469 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 GM2AP17900 193 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 RFC1P35251 1148 aaPredicted RBP13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 SNRPFP62306 86 aaKnown RBP13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 PDE1BQ01064 536 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 ROR1Q01973 937 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 PIGHQ14442 188 aaPredicted RBP13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 C4orf50Q6ZRC1 276 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 FAM151AQ8WW52 585 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 SLCO2A1Q92959 643 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 ATG4CQ96DT6 458 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 NLRP4Q96MN2 994 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 DDX56Q9NY93 547 aaKnown RBP13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 ZC3H7BQ9UGR2 993 aaKnown RBP13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 C2CD2LO14523 706 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 ALOX15BO15296 676 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 ZBTB7AO95365 584 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 RPL22P35268 128 aaKnown RBP13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 RAP1GAPP47736 663 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 GDF10P55107 478 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 ZACNQ401N2 412 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 SLFN12LQ6IEE8 588 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 TTC13Q8NBP0 860 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 ADPGKQ9BRR6 497 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 TIPINQ9BVW5 301 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 RPAP3Q9H6T3 665 aaPredicted RBP13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 IFT122Q9HBG6 1241 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 SH3BP1Q9Y3L3 701 aa13.16□□□□□ -0.3
TMEM200A-201ENST00000296978 SYNJ2BP-COX16A0A087WUM0 186 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 ABHD2P08910 425 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 SAT1P21673 171 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 GARTP22102 1010 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 AQP5P55064 265 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 TMEM63BQ5T3F8 832 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 NPNTQ6UXI9 565 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 IZUMO2Q6UXV1 221 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 UNC45BQ8IWX7 931 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 NDUFAF2Q8N183 169 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 POU5F2Q8N7G0 328 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 SLC7A6OSQ96CW6 309 aaPredicted RBP13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 ATXN7L3BQ96GX2 97 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 MFSD14AQ96MC6 490 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 APOBEC3GQ9HC16 384 aaKnown RBP13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 CISHQ9NSE2 258 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 COX16Q9P0S2 106 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 DHX15O43143 795 aaKnown RBP13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 PRPSAP2O60256 369 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 PSMG1O95456 288 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 HIRAP54198 1017 aaPredicted RBP13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 SLC34A1Q06495 639 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 C1QBPQ07021 282 aaKnown RBP13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 CCDC15Q0P6D6 951 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 ATG16L1Q676U5 607 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 SLC39A4Q6P5W5 647 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 RSPH3Q86UC2 560 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 PRR11Q96HE9 360 aaPredicted RBP13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 HEXIM2Q96MH2 286 aaKnown RBP13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 SYT15Q9BQS2 421 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 NMUR2Q9GZQ4 415 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 GPATCH2LQ9NWQ4 482 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 SEPT10Q9P0V9 454 aa13.15□□□□□ -0.3
TMEM200A-201ENST00000296978 GSC2O15499 205 aa13.14□□□□□ -0.31
TMEM200A-201ENST00000296978 PRPF4O43172 522 aaKnown RBP eCLIP13.14□□□□□ -0.31
TMEM200A-201ENST00000296978 GRIN3BO60391 1043 aa13.14□□□□□ -0.31
TMEM200A-201ENST00000296978 LDHAP00338 332 aaKnown RBP13.14□□□□□ -0.31
TMEM200A-201ENST00000296978 ALADP13716 330 aa13.14□□□□□ -0.31
TMEM200A-201ENST00000296978 ACTR2P61160 394 aa13.14□□□□□ -0.31
TMEM200A-201ENST00000296978 MSS51Q4VC12 460 aa13.14□□□□□ -0.31
TMEM200A-201ENST00000296978 ACSBG2Q5FVE4 666 aa13.14□□□□□ -0.31
TMEM200A-201ENST00000296978 RASSF3Q86WH2 238 aa13.14□□□□□ -0.31
TMEM200A-201ENST00000296978 CCDC60Q8IWA6 550 aaPredicted RBP13.14□□□□□ -0.31
TMEM200A-201ENST00000296978 ASAP3Q8TDY4 903 aa13.14□□□□□ -0.31
TMEM200A-201ENST00000296978 DEPDC1BQ8WUY9 529 aa13.14□□□□□ -0.31
TMEM200A-201ENST00000296978 E2F7Q96AV8 911 aa13.14□□□□□ -0.31
TMEM200A-201ENST00000296978 ALKBH8Q96BT7 664 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms