RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 MCM2P49736 904 aa10.01□□□□□ -0.81
CNOT9-202ENST00000295701 TAF6P49848 677 aa10.01□□□□□ -0.81
CNOT9-202ENST00000295701 NLRP12P59046 1061 aa10.01□□□□□ -0.81
CNOT9-202ENST00000295701 KCNA1Q09470 495 aa10.01□□□□□ -0.81
CNOT9-202ENST00000295701 RUNX3Q13761 415 aa10.01□□□□□ -0.81
CNOT9-202ENST00000295701 VEPH1Q14D04 833 aa10.01□□□□□ -0.81
CNOT9-202ENST00000295701 DDR2Q16832 855 aa10.01□□□□□ -0.81
CNOT9-202ENST00000295701 TMEM196Q5HYL7 178 aa10.01□□□□□ -0.81
CNOT9-202ENST00000295701 DYMQ7RTS9 669 aa10.01□□□□□ -0.81
CNOT9-202ENST00000295701 METTL23Q86XA0 190 aa10.01□□□□□ -0.81
CNOT9-202ENST00000295701 CD302Q8IX05 232 aa10.01□□□□□ -0.81
CNOT9-202ENST00000295701 THEM5Q8N1Q8 247 aa10.01□□□□□ -0.81
CNOT9-202ENST00000295701 KCTD17Q8N5Z5 321 aa10.01□□□□□ -0.81
CNOT9-202ENST00000295701 CALML4Q96GE6 196 aa10.01□□□□□ -0.81
CNOT9-202ENST00000295701 TSPAN18Q96SJ8 248 aa10.01□□□□□ -0.81
CNOT9-202ENST00000295701 TBC1D7Q9P0N9 293 aa10.01□□□□□ -0.81
CNOT9-202ENST00000295701 HSFX1Q9UBD0 423 aa10.01□□□□□ -0.81
CNOT9-202ENST00000295701 AGO2Q9UKV8 859 aaKnown RBP10.01□□□□□ -0.81
CNOT9-202ENST00000295701 MAGED2Q9UNF1 606 aaPredicted RBP10.01□□□□□ -0.81
CNOT9-202ENST00000295701 DERAQ9Y315 318 aa10.01□□□□□ -0.81
CNOT9-202ENST00000295701 KPNA7A9QM74 516 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 TRDMT1O14717 391 aaKnown RBP10□□□□□ -0.81
CNOT9-202ENST00000295701 PRPF40AO75400 957 aaKnown RBP10□□□□□ -0.81
CNOT9-202ENST00000295701 TADA3O75528 432 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 ACAT1P24752 427 aaKnown RBP10□□□□□ -0.81
CNOT9-202ENST00000295701 CYP2F1P24903 491 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 HOXA6P31267 233 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 GALK1P51570 392 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 TAF12Q16514 161 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 C1orf228Q6PIY5 440 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 ZNF720Q7Z2F6 126 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 OSTM1Q86WC4 334 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 SFR1Q86XK3 245 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 TTC16Q8NEE8 873 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 FAM174AQ8TBP5 190 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 GAB3Q8WWW8 586 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 LARP4BQ92615 738 aaKnown RBP10□□□□□ -0.81
CNOT9-202ENST00000295701 EZH1Q92800 747 aaPredicted RBP10□□□□□ -0.81
CNOT9-202ENST00000295701 FOXJ1Q92949 421 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 SAAL1Q96ER3 474 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 EPSTI1Q96J88 318 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 AK8Q96MA6 479 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 GCNAQ96QF7 691 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 HHIPQ96QV1 700 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 SLC22A12Q96S37 553 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 CYP2S1Q96SQ9 504 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 ASB7Q9H672 318 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 TDP1Q9NUW8 608 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 THG1LQ9NWX6 298 aaKnown RBP10□□□□□ -0.81
CNOT9-202ENST00000295701 DSEQ9UL01 958 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 C2CD2Q9Y426 696 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 STYXL1Q9Y6J8 313 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 KIAA1549LQ6ZVL6 1849 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 ZFHX4Q86UP3 3567 aa10□□□□□ -0.81
CNOT9-202ENST00000295701 PTPRDP23468 1912 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 GOLGA8IPA6NC78 632 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 GOLGA8JA6NMD2 632 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 TM4SF5O14894 197 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 DCLK1O15075 740 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 TBCAO75347 108 aaKnown RBP9.99□□□□□ -0.81
CNOT9-202ENST00000295701 RPP40O75818 363 aaKnown RBP9.99□□□□□ -0.81
CNOT9-202ENST00000295701 EPN2O95208 641 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 ZNF806P0C7X5 589 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 POLR2BP30876 1174 aaKnown RBP9.99□□□□□ -0.81
CNOT9-202ENST00000295701 DDIT3P35638 169 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 AVPR1AP37288 418 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 RAP1GAPP47736 663 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 GRSF1Q12849 480 aaKnown RBP eCLIP9.99□□□□□ -0.81
CNOT9-202ENST00000295701 SF3A1Q15459 793 aaKnown RBP9.99□□□□□ -0.81
CNOT9-202ENST00000295701 ST3GAL2Q16842 350 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 AASDHQ4L235 1098 aaPredicted RBP9.99□□□□□ -0.81
CNOT9-202ENST00000295701 LCE2AQ5TA79 106 aaPredicted RBP9.99□□□□□ -0.81
CNOT9-202ENST00000295701 N4BP2L1Q5TBK1 243 aaPredicted RBP9.99□□□□□ -0.81
CNOT9-202ENST00000295701 DCP1BQ8IZD4 617 aaKnown RBP9.99□□□□□ -0.81
CNOT9-202ENST00000295701 SYNPOQ8N3V7 929 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 PDCL2Q8N4E4 241 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 C1orf127Q8N9H9 656 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 RASSF8Q8NHQ8 419 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 SPPL2BQ8TCT7 592 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 POMGNT1Q8WZA1 660 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 CHAMP1Q96JM3 812 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 FAM213AQ9BRX8 229 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 STRA6Q9BX79 667 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 FGFBP2Q9BYJ0 223 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 CCSER1Q9C0I3 900 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 L1RE1Q9UN81 338 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 AGAP1Q9UPQ3 857 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 SLC8A2Q9UPR5 921 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 INVSQ9Y283 1065 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 PCDHB5Q9Y5E4 795 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.99□□□□□ -0.81
CNOT9-202ENST00000295701 CLIC4Q9Y696 253 aa9.99□□□□□ -0.81
CNOT9-202ENST00000295701 PI4KAP42356 2102 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 HELZP42694 1942 aaKnown RBP9.98□□□□□ -0.81
CNOT9-202ENST00000295701 FRYQ5TBA9 3013 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 MYMKA6NI61 221 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 SLC26A4O43511 780 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 ATP2C2O75185 946 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 ITGB3P05106 788 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 CCDC192P0DO97 292 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms