RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 CHST7Q9NS84 486 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 DDX43Q9NXZ2 648 aaKnown RBP8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 ADGRG1Q9Y653 693 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 DDX3XO00571 662 aaKnown RBP eCLIP8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 GABRB2P47870 512 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 DSG1Q02413 1049 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 PPARDQ03181 441 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 RAB30Q15771 203 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 SCML4Q8N228 414 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 MYCBPAPQ8TBZ2 947 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 ZNF606Q8WXB4 792 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 SYT15Q9BQS2 421 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 TTPALQ9BTX7 342 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 MAK16Q9BXY0 300 aaKnown RBP8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 PNPLA8Q9NP80 782 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 COMMD8Q9NX08 183 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 FNIP2Q9P278 1114 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 HMGXB4Q9UGU5 601 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 NME7Q9Y5B8 376 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 SMIM23A6NLE4 172 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 XPAP23025 273 aaPredicted RBP8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 ACAD10Q6JQN1 1059 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 PDE12Q6L8Q7 609 aaKnown RBP8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 CCDC91Q7Z6B0 441 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 KIAA1524Q8TCG1 905 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 SLC20A1Q8WUM9 679 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 FUBP3Q96I24 572 aaKnown RBP eCLIP8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 RNPC3Q96LT9 517 aaKnown RBP8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 TWNKQ96RR1 684 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 MTRRQ9UBK8 725 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 NAGPAQ9UK23 515 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 PCNTO95613 3336 aa8.91□□□□□ -0.98
PTPDC1-201ENST00000288976 TLL1O43897 1013 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 MMEP08473 750 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 PNMA6AP0CW24 399 aaPredicted RBP8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 PTPN1P18031 435 aaKnown RBP8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 BRCC3P46736 316 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 BCAT1P54687 386 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 HADHBP55084 474 aaKnown RBP8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 CDH8P55286 799 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 NOMO3P69849 1222 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 C1QBPQ07021 282 aaKnown RBP8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 PAN2Q504Q3 1202 aaKnown RBP8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 TOGARAM2Q6ZUX3 1019 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 RTL10Q7L3V2 364 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 CEP57Q86XR8 500 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 ZDHHC17Q8IUH5 632 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 C16orf45Q96MC5 204 aaPredicted RBP8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 HEXIM2Q96MH2 286 aaKnown RBP8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 AVENQ9NQS1 362 aaPredicted RBP8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 CXXC1Q9P0U4 656 aaPredicted RBP8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 STIM2Q9P246 746 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 MOSPD1Q9UJG1 213 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 PPP2R2CQ9Y2T4 447 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 PCDHA13Q9Y5I0 950 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 A0A1W2PPC1 479 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 ITGB1P05556 798 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 CALB1P05937 261 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 PLEKP08567 350 aaPredicted RBP8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 TMEM253P0C7T8 217 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 TKTP29401 623 aaKnown RBP8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 SCNN1AP37088 669 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 MAGEA11P43364 429 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 PLA2G4AP47712 749 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 BST2Q10589 180 aaKnown RBP8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 TMEM35BQ8NCS4 154 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 RAB3IL1Q8TBN0 382 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 BCL7CQ8WUZ0 217 aaPredicted RBP8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 KCTD13Q8WZ19 329 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 IQCGQ9H095 443 aaKnown RBP8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 STRIP2Q9ULQ0 834 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 CACNA1EQ15878 2313 aa8.9□□□□□ -0.98
PTPDC1-201ENST00000288976 FSCN2O14926 492 aa8.9□□□□□ -0.99
PTPDC1-201ENST00000288976 SPOPO43791 374 aa8.9□□□□□ -0.99
PTPDC1-201ENST00000288976 MTA2O94776 668 aa8.9□□□□□ -0.99
PTPDC1-201ENST00000288976 MICAL2O94851 1124 aa8.9□□□□□ -0.99
PTPDC1-201ENST00000288976 RBM10P98175 930 aaKnown RBP8.9□□□□□ -0.99
PTPDC1-201ENST00000288976 KRT17Q04695 432 aa8.9□□□□□ -0.99
PTPDC1-201ENST00000288976 VARS2Q5ST30 1063 aaKnown RBP8.9□□□□□ -0.99
PTPDC1-201ENST00000288976 ANKRD52Q8NB46 1076 aa8.9□□□□□ -0.99
PTPDC1-201ENST00000288976 SUDS3Q9H7L9 328 aaPredicted RBP8.9□□□□□ -0.99
PTPDC1-201ENST00000288976 MYO1AQ9UBC5 1043 aa8.9□□□□□ -0.99
PTPDC1-201ENST00000288976 ERLIN1O75477 346 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 BRD2P25440 801 aaKnown RBP8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 ACADSBP45954 432 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 GLUD2P49448 558 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 GNG11P61952 73 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 GFPT1Q06210 699 aaPredicted RBP8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 PTPN14Q15678 1187 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 MON1BQ7L1V2 547 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 SKA2Q8WVK7 121 aaPredicted RBP8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 VN1R3Q9BXE9 311 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 LMAN2LQ9H0V9 348 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 ZBP1Q9H171 429 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 KIF9Q9HAQ2 790 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 RXFP1Q9HBX9 757 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 CSNK1G1Q9HCP0 422 aa8.89□□□□□ -0.99
PTPDC1-201ENST00000288976 PRG3Q9Y2Y8 225 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms