RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 ACVR2BQ13705 512 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 ARHGEF7Q14155 803 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 SLC27A1Q6PCB7 646 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 DNAAF5Q86Y56 855 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 PIP4K2CQ8TBX8 421 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 STAMBPL1Q96FJ0 436 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 MRPL40Q9NQ50 206 aaKnown RBP11.74□□□□□ -0.53
USP6NL-201ENST00000277575 GPATCH2LQ9NWQ4 482 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 NOP53Q9NZM5 478 aaKnown RBP11.74□□□□□ -0.53
USP6NL-201ENST00000277575 ARL2BPQ9Y2Y0 163 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 TMEM120BA0PK00 339 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 CASTOR2A6NHX0 329 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 MYO1DO94832 1006 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 UBA1P22314 1058 aaKnown RBP11.74□□□□□ -0.53
USP6NL-201ENST00000277575 SLC12A3P55017 1021 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 PDK2Q15119 407 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 AGBL2Q5U5Z8 902 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 PAPD7Q5XG87 772 aaKnown RBP11.74□□□□□ -0.53
USP6NL-201ENST00000277575 HAS1Q92839 578 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 ELMO2Q96JJ3 720 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 ZBTB45Q96K62 511 aaPredicted RBP11.74□□□□□ -0.53
USP6NL-201ENST00000277575 CCT8L2Q96SF2 557 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 TSSK1BQ9BXA7 367 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 GPR63Q9BZJ6 419 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 MARCOQ9UEW3 520 aaPredicted RBP11.74□□□□□ -0.53
USP6NL-201ENST00000277575 H7C4K7 107 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 ANXA9O76027 345 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 LMNAP02545 664 aaKnown RBP11.74□□□□□ -0.53
USP6NL-201ENST00000277575 GHRP10912 638 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 GCNT1Q02742 428 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 SH3RF1Q7Z6J0 888 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 SLFN11Q7Z7L1 901 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 RIOX2Q8IUF8 465 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 CCDC60Q8IWA6 550 aaPredicted RBP11.74□□□□□ -0.53
USP6NL-201ENST00000277575 BRSK2Q8IWQ3 736 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 N4BP2L2Q92802 583 aaPredicted RBP11.74□□□□□ -0.53
USP6NL-201ENST00000277575 EML4Q9HC35 981 aaKnown RBP11.74□□□□□ -0.53
USP6NL-201ENST00000277575 KCNMB3Q9NPA1 279 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 CYP39A1Q9NYL5 469 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 STOML1Q9UBI4 398 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 SCOCQ9UIL1 159 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 ITGA11Q9UKX5 1188 aa11.74□□□□□ -0.53
USP6NL-201ENST00000277575 A0A0A6YYK5 440 aaPredicted RBP11.73□□□□□ -0.53
USP6NL-201ENST00000277575 CKMP06732 381 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 AKAP5P24588 427 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 MAGEA9P43362 315 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 RPL10AP62906 217 aaKnown RBP11.73□□□□□ -0.53
USP6NL-201ENST00000277575 OTUD4Q01804 1114 aaKnown RBP11.73□□□□□ -0.53
USP6NL-201ENST00000277575 EVX2Q03828 476 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 MCL1Q07820 350 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 CDH18Q13634 790 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 TBCCQ15814 346 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 LRRC6Q86X45 466 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 MAP4K3Q8IVH8 894 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 XPO6Q96QU8 1125 aaKnown RBP11.73□□□□□ -0.53
USP6NL-201ENST00000277575 CASS4Q9NQ75 786 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 DSEQ9UL01 958 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 BARX2Q9UMQ3 279 aaPredicted RBP11.73□□□□□ -0.53
USP6NL-201ENST00000277575 TIMM13Q9Y5L4 95 aaPredicted RBP11.73□□□□□ -0.53
USP6NL-201ENST00000277575 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.73□□□□□ -0.53
USP6NL-201ENST00000277575 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.73□□□□□ -0.53
USP6NL-201ENST00000277575 FRMD3A2A2Y4 597 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 NPM3O75607 178 aaKnown RBP11.73□□□□□ -0.53
USP6NL-201ENST00000277575 PSMD10O75832 226 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 PYGLP06737 847 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 MAP3K7CLP57077 242 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 PPIL2Q13356 520 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 ZNF177Q13360 481 aaPredicted RBP11.73□□□□□ -0.53
USP6NL-201ENST00000277575 CLEC16AQ2KHT3 1053 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 IQSEC1Q6DN90 963 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 C1orf186Q6ZWK4 172 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 MFN1Q8IWA4 741 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 SOCS4Q8WXH5 440 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 ARL8AQ96BM9 186 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 XPNPEP3Q9NQH7 507 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 NSMCE4AQ9NXX6 385 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.73□□□□□ -0.53
USP6NL-201ENST00000277575 DMGDHQ9UI17 866 aaKnown RBP11.73□□□□□ -0.53
USP6NL-201ENST00000277575 TBC1D12O60347 775 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 POMCP01189 267 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 HMOX2P30519 316 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 C1QBPQ07021 282 aaKnown RBP11.73□□□□□ -0.53
USP6NL-201ENST00000277575 RBBP7Q16576 425 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 MROH9Q5TGP6 573 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 SHCBP1Q8NEM2 672 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 MRPS31Q92665 395 aaKnown RBP11.73□□□□□ -0.53
USP6NL-201ENST00000277575 MTMR8Q96EF0 704 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 WDR18Q9BV38 432 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 FAM129AQ9BZQ8 928 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 PABPC3Q9H361 631 aaKnown RBP11.73□□□□□ -0.53
USP6NL-201ENST00000277575 ZNF212Q9UDV6 495 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 USP18Q9UMW8 372 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 PCDHGB4Q9UN71 923 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 RPS6KL1Q9Y6S9 549 aa11.73□□□□□ -0.53
USP6NL-201ENST00000277575 CFAP99D6REC4 459 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 FBXO21O94952 628 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 NDST1P52848 882 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 MFSD10Q14728 455 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 ZBTB41Q5SVQ8 909 aa11.72□□□□□ -0.53
USP6NL-201ENST00000277575 PTRHD1Q6GMV3 140 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms