RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 CYP2D6P10635 497 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 TTKP33981 857 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 NCOA4Q13772 614 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 CYP51A1Q16850 503 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 XKR3Q5GH77 459 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 MROH9Q5TGP6 573 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 KLHDC7AQ5VTJ3 777 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 ADGRF4Q8IZF3 695 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 SLC30A5Q8TAD4 765 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 RNFT2Q96EX2 444 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 MCRS1Q96EZ8 462 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 AVENQ9NQS1 362 aaPredicted RBP9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 SPATA2Q9UM82 520 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 CPDO75976 1380 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 F8VZ95 297 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 TPST1O60507 370 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 C21orf59P57076 290 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 ST8SIA6P61647 398 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 KLHL12Q53G59 568 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 ZFP1Q6P2D0 407 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 TMPRSS6Q8IU80 811 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 CAVIN3Q969G5 261 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 GCC2Q8IWJ2 1684 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 MROH7-TTC4A0A0A0MT08 1334 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 PHGDHO43175 533 aaKnown RBP9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 GYPCP04921 128 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 RBP1P09455 135 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 CCT8P50990 548 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 MRNIPQ6NTE8 343 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 ASZ1Q8WWH4 475 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 MPP4Q96JB8 637 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 TMEM120AQ9BXJ8 343 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 ADAM33Q9BZ11 813 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 CELF4Q9BZC1 486 aaKnown RBP9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 COMMD8Q9NX08 183 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 WWOXQ9NZC7 414 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 AGAP1Q9UPQ3 857 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 ARIH1Q9Y4X5 557 aaPredicted RBP9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 V9GYQ6 96 aa9.03□□□□□ -0.96
SCUBE3-201ENST00000274938 AKR1B1P15121 316 aa9.02□□□□□ -0.96
SCUBE3-201ENST00000274938 TFE3P19532 575 aaPredicted RBP9.02□□□□□ -0.96
SCUBE3-201ENST00000274938 FASP25445 335 aa9.02□□□□□ -0.96
SCUBE3-201ENST00000274938 SNRNP35Q16560 246 aaKnown RBP9.02□□□□□ -0.96
SCUBE3-201ENST00000274938 TTC30BQ8N4P2 665 aa9.02□□□□□ -0.96
SCUBE3-201ENST00000274938 USP33Q8TEY7 942 aa9.02□□□□□ -0.96
SCUBE3-201ENST00000274938 USP13Q92995 863 aaPredicted RBP9.02□□□□□ -0.96
SCUBE3-201ENST00000274938 CAMKK2Q96RR4 588 aa9.02□□□□□ -0.96
SCUBE3-201ENST00000274938 TMEM2Q9UHN6 1383 aa9.02□□□□□ -0.96
SCUBE3-201ENST00000274938 ASB14A6NK59 587 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 ALDH1A1P00352 501 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 CD4P01730 458 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 KRT6AP02538 564 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 PDZK1Q5T2W1 519 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 NEK10Q6ZWH5 1172 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 DPP10Q8N608 796 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 TMEM79Q9BSE2 394 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 CD209Q9NNX6 404 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 CNOT7Q9UIV1 285 aaKnown RBP9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 TRMT6Q9UJA5 497 aaKnown RBP9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 TPRKBQ9Y3C4 175 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 SPATA31E1Q6ZUB1 1445 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 NPM3O75607 178 aaKnown RBP9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 RFC5P40937 340 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 PRKAA2P54646 552 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 TPCN2Q8NHX9 752 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 ENKURQ8TC29 256 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 ATXN2LQ8WWM7 1075 aaKnown RBP9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 PACSIN1Q9BY11 444 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 FYNP06241 537 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 EXOSC10Q01780 885 aaKnown RBP9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 OVGP1Q12889 678 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 DCTN2Q13561 401 aaKnown RBP9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 RASA2Q15283 850 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 SLC7A14Q8TBB6 771 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 PIGUQ9H490 435 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 MYRFQ9Y2G1 1151 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 MAGI2Q86UL8 1455 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 CDK12Q9NYV4 1490 aaPredicted RBP9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 TPP2P29144 1249 aaPredicted RBP9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 ATP6AP1LQ52LC2 224 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 SDE2Q6IQ49 451 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 SPASTQ9UBP0 616 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 ZNF335Q9H4Z2 1342 aaPredicted RBP9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 CSPG5O95196 566 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 KLRC1P26715 233 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 SERPINB5P36952 375 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 GRIK1P39086 918 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 SLC16A1P53985 500 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 EPS8Q12929 822 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 TMEM132DQ14C87 1099 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 KDELC2Q7Z4H8 507 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 ACTRT1Q8TDG2 376 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 TFB1MQ8WVM0 346 aaKnown RBP9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 PABPC5Q96DU9 382 aaKnown RBP9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 DNAJC7Q99615 494 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 ZBED2Q9BTP6 218 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 HMG20AQ9NP66 347 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 TRIM10Q9UDY6 481 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 ASAP1Q9ULH1 1129 aa9.02□□□□□ -0.97
SCUBE3-201ENST00000274938 WDR62O43379 1518 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms