RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 RTP3Q9BQQ7 232 aa14.88□□□□□ -0.03
SS18-201ENST00000269137 DUSP16Q9BY84 665 aa14.88□□□□□ -0.03
SS18-201ENST00000269137 NRDE2Q9H7Z3 1164 aa14.88□□□□□ -0.03
SS18-201ENST00000269137 ST7Q9NRC1 585 aa14.88□□□□□ -0.03
SS18-201ENST00000269137 DNAJB4Q9UDY4 337 aa14.88□□□□□ -0.03
SS18-201ENST00000269137 E5RJQ4 531 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 TULP2O00295 520 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 TRAPPC3O43617 180 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 GJB6O95452 261 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 TKTP29401 623 aaKnown RBP14.87□□□□□ -0.03
SS18-201ENST00000269137 PLA2G4AP47712 749 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 OR1G1P47890 313 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 PIGHQ14442 188 aaPredicted RBP14.87□□□□□ -0.03
SS18-201ENST00000269137 ERCC6LQ2NKX8 1250 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 MDH1BQ5I0G3 518 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 ZDHHC17Q8IUH5 632 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 MYCBPAPQ8TBZ2 947 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 HASPINQ8TF76 798 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 KRT35Q92764 455 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 MS4A14Q96JA4 679 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 TMEM175Q9BSA9 504 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 ABHD14A-ACY1A0A1B0GW23 586 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 TRIM43BA6NCK2 446 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 F8W810 466 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 GOLGA8SH3BPF8 625 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 XPO1O14980 1071 aaKnown RBP14.87□□□□□ -0.03
SS18-201ENST00000269137 CEP104O60308 925 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 RFC1P35251 1148 aaPredicted RBP14.87□□□□□ -0.03
SS18-201ENST00000269137 ACADSBP45954 432 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 RGS7P49802 495 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 GATMP50440 423 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 SLC8A3P57103 927 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 NAA30Q147X3 362 aaPredicted RBP14.87□□□□□ -0.03
SS18-201ENST00000269137 DCAF12L1Q5VU92 463 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 OVOS1Q6IE37 1185 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 FAM171BQ6P995 826 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 MTERF4Q7Z6M4 381 aaKnown RBP14.87□□□□□ -0.03
SS18-201ENST00000269137 CPNE8Q86YQ8 564 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 THEM5Q8N1Q8 247 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 SPATA4Q8NEY3 305 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 TRIM43Q96BQ3 446 aaPredicted RBP14.87□□□□□ -0.03
SS18-201ENST00000269137 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.87□□□□□ -0.03
SS18-201ENST00000269137 COLEC11Q9BWP8 271 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 B3GNT5Q9BYG0 378 aa14.87□□□□□ -0.03
SS18-201ENST00000269137 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.87□□□□□ -0.03
SS18-201ENST00000269137 V9GYY5 206 aaPredicted RBP14.87□□□□□ -0.03
SS18-201ENST00000269137 FNDC1Q4ZHG4 1894 aaPredicted RBP14.86□□□□□ -0.03
SS18-201ENST00000269137 MYBPHLA2RUH7 354 aa14.86□□□□□ -0.03
SS18-201ENST00000269137 GABBR2O75899 941 aa14.86□□□□□ -0.03
SS18-201ENST00000269137 OAZ2O95190 189 aa14.86□□□□□ -0.03
SS18-201ENST00000269137 ALDH2P05091 517 aa14.86□□□□□ -0.03
SS18-201ENST00000269137 NPR3P17342 541 aa14.86□□□□□ -0.03
SS18-201ENST00000269137 SCNN1AP37088 669 aa14.86□□□□□ -0.03
SS18-201ENST00000269137 MARCKSL1P49006 195 aa14.86□□□□□ -0.03
SS18-201ENST00000269137 OGDHQ02218 1023 aa14.86□□□□□ -0.03
SS18-201ENST00000269137 ZNF252P-AS1Q0IIN9 211 aa14.86□□□□□ -0.03
SS18-201ENST00000269137 CLUL1Q15846 466 aa14.86□□□□□ -0.03
SS18-201ENST00000269137 INTS6LQ5JSJ4 861 aaKnown RBP14.86□□□□□ -0.03
SS18-201ENST00000269137 TEX35Q5T0J7 233 aa14.86□□□□□ -0.03
SS18-201ENST00000269137 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.86□□□□□ -0.03
SS18-201ENST00000269137 FAM183BPQ6ZVS7 135 aa14.86□□□□□ -0.03
SS18-201ENST00000269137 UBE2Q1Q7Z7E8 422 aa14.86□□□□□ -0.03
SS18-201ENST00000269137 PKMYT1Q99640 499 aa14.86□□□□□ -0.03
SS18-201ENST00000269137 PRDM10Q9NQV6 1147 aa14.86□□□□□ -0.03
SS18-201ENST00000269137 PRG3Q9Y2Y8 225 aaPredicted RBP14.86□□□□□ -0.03
SS18-201ENST00000269137 TBKBP1A7MCY6 615 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 PGRMC1O00264 195 aaKnown RBP14.85□□□□□ -0.03
SS18-201ENST00000269137 NRP1O14786 923 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 SYN3O14994 580 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 PSTPIP1O43586 416 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 EFCAB14O75071 495 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 TADA2AO75478 443 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 ITGB8P26012 769 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 RWDD2BP57060 319 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 MAPRE1Q15691 268 aaKnown RBP14.85□□□□□ -0.03
SS18-201ENST00000269137 CCDC142Q17RM4 750 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 FAM102AQ5T9C2 384 aaPredicted RBP14.85□□□□□ -0.03
SS18-201ENST00000269137 OR6B2Q6IFH4 312 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 MFSD5Q6N075 450 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 OLFML1Q6UWY5 402 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 LRRC43Q8N309 656 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 NOA1Q8NC60 698 aaKnown RBP14.85□□□□□ -0.03
SS18-201ENST00000269137 JOSD2Q8TAC2 188 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 KCTD13Q8WZ19 329 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 PCED1BQ96HM7 432 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 METTL5Q9NRN9 209 aaKnown RBP14.85□□□□□ -0.03
SS18-201ENST00000269137 SMARCAL1Q9NZC9 954 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 EHD2Q9NZN4 543 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 TMEM59LQ9UK28 342 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 ADAM28Q9UKQ2 775 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.85□□□□□ -0.03
SS18-201ENST00000269137 LTBP2Q14767 1821 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 CLDN5O00501 218 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 PAPSS1O43252 624 aaPredicted RBP14.85□□□□□ -0.03
SS18-201ENST00000269137 FAM200BP0CF97 657 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 SLC6A3Q01959 620 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 YWHAHQ04917 246 aaPredicted RBP14.85□□□□□ -0.03
SS18-201ENST00000269137 ACAP1Q15027 740 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 ELF2Q15723 593 aa14.85□□□□□ -0.03
SS18-201ENST00000269137 LRRC38Q5VT99 294 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms