RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 FAPQ12884 760 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 BARGINQ6ZT62 677 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 RNF25Q96BH1 459 aaPredicted RBP5.92□□□□□ -1.46
VCAN-201ENST00000265077 DYNLL2Q96FJ2 89 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 C11orf70Q9BRQ4 267 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 ADNPQ9H2P0 1102 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 DCDC2Q9UHG0 476 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 AFF2P51816 1311 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 USP17L5A8MUK1 530 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 NFIBO00712 420 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 SEC24DO94855 1032 aaPredicted RBP5.92□□□□□ -1.46
VCAN-201ENST00000265077 KCNMA1Q12791 1236 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 PDK3Q15120 406 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 FASTKD1Q53R41 847 aaKnown RBP5.92□□□□□ -1.46
VCAN-201ENST00000265077 POTEGQ6S5H5 508 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 RHPN2Q8IUC4 686 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 OR6B3Q8NGW1 331 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 TEX13BQ9BXU2 312 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 TCP10L2B9ZVM9 353 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 TBX3O15119 743 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 ANGPT2O15123 496 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 PSMD3O43242 534 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 TSPAN1O60635 241 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 NCALDP61601 193 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 PARP6Q2NL67 630 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 C1QTNF12Q5T7M4 302 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 EGFLAMQ63HQ2 1017 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 ASAP3Q8TDY4 903 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 TRPC4APQ8TEL6 797 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 MKNK1Q9BUB5 465 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 SCN8AQ9UQD0 1980 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 APOA4P06727 396 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 FDX1P10109 184 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 SLC9A3P48764 834 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 ZNF844Q08AG5 666 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 SMYD1Q8NB12 490 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 KCTD4Q8WVF5 259 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 CCDC90BQ9GZT6 254 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 SLC8A2Q9UPR5 921 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 NEU2Q9Y3R4 380 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 TSPAN4O14817 238 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 ATP6V1E1P36543 226 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 UBE2SQ16763 222 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 JAMLQ86YT9 394 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 ACAT2Q9BWD1 397 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 INTS2Q9H0H0 1204 aaKnown RBP5.92□□□□□ -1.46
VCAN-201ENST00000265077 JMJD4Q9H9V9 463 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 OLA1Q9NTK5 396 aaKnown RBP5.92□□□□□ -1.46
VCAN-201ENST00000265077 CACNA1DQ01668 2161 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 RHOBTB3O94955 611 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 EYA4O95677 639 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 NPR1P16066 1061 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 PRKACAP17612 351 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 COPAP53621 1224 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 XIAPP98170 497 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 CAPRIN1Q14444 709 aaKnown RBP5.92□□□□□ -1.46
VCAN-201ENST00000265077 FAM98CQ17RN3 349 aaKnown RBP5.92□□□□□ -1.46
VCAN-201ENST00000265077 TBC1D25Q3MII6 688 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 LRRC8EQ6NSJ5 796 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 CORO1BQ9BR76 489 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 IQSEC2Q5JU85 1478 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 MYO3BQ8WXR4 1341 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 LINC00854A0A1B0GVQ3 168 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 H3BNX3 289 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 M0QYV0 167 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 SLC4A1P02730 911 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 FAM228BP0C875 321 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 LTKP29376 864 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 ZNF211Q13398 564 aaPredicted RBP5.92□□□□□ -1.46
VCAN-201ENST00000265077 PRKG1Q13976 671 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 WDR45BQ5MNZ6 344 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 SQORQ9Y6N5 450 aa5.92□□□□□ -1.46
VCAN-201ENST00000265077 DENND3A2RUS2 1198 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 RAD51BO15315 384 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 UNC5CO95185 931 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 IGKV5-2P06315 115 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 PORP16435 677 aaPredicted RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 PSMC5P62195 406 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 SPOUT1Q5T280 376 aaKnown RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 MYRFQ9Y2G1 1151 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 EIF3DO15371 548 aaKnown RBP eCLIP5.91□□□□□ -1.46
VCAN-201ENST00000265077 RAD51CO43502 376 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 ASLP04424 464 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 TTKP33981 857 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 FMO5P49326 533 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 PUDPQ08623 228 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 ABI1Q8IZP0 508 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 EXT2Q93063 718 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 MAP3K14Q99558 947 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 WDR12Q9GZL7 423 aaKnown RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 CLEC4MQ9H2X3 399 aaPredicted RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 ASAP1Q9ULH1 1129 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 HALP42357 657 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 FXR1P51114 621 aaKnown RBP eCLIP5.91□□□□□ -1.46
VCAN-201ENST00000265077 KCNQ4P56696 695 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 GRAPQ13588 217 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 PDK1Q15118 436 aa5.91□□□□□ -1.46
VCAN-201ENST00000265077 PAPD7Q5XG87 772 aaKnown RBP5.91□□□□□ -1.46
VCAN-201ENST00000265077 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.91□□□□□ -1.46
VCAN-201ENST00000265077 BEST2Q8NFU1 509 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms