RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 RNF169Q8NCN4 708 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 ACTL9Q8TC94 416 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 ALKBH8Q96BT7 664 aaKnown RBP16.98■□□□□ 0.31
GPC1-201ENST00000264039 HERPUD2Q9BSE4 406 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 RIOX1Q9H6W3 641 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 PIH1D1Q9NWS0 290 aaKnown RBP16.98■□□□□ 0.31
GPC1-201ENST00000264039 TMA7Q9Y2S6 64 aaKnown RBP16.98■□□□□ 0.31
GPC1-201ENST00000264039 NWD2Q9ULI1 1742 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 FRMPD4Q14CM0 1322 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 ADCY6O43306 1168 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 LYPLA1O75608 230 aaPredicted RBP16.98■□□□□ 0.31
GPC1-201ENST00000264039 POLR2MP0CAP2 368 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 HOXA7P31268 230 aaPredicted RBP16.98■□□□□ 0.31
GPC1-201ENST00000264039 INHBCP55103 352 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 TPD52P55327 224 aaPredicted RBP16.98■□□□□ 0.31
GPC1-201ENST00000264039 NADK2Q4G0N4 442 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 OLFML1Q6UWY5 402 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 PATL1Q86TB9 770 aaKnown RBP16.98■□□□□ 0.31
GPC1-201ENST00000264039 PGBD4Q96DM1 585 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 NDUFA13Q9P0J0 144 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 STRNO43815 780 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 AVILO75366 819 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 CSPG5O95196 566 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 MCF2P10911 925 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 CLVS1Q8IUQ0 354 aaPredicted RBP16.98■□□□□ 0.31
GPC1-201ENST00000264039 ACSS2Q9NR19 701 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 TBC1D23Q9NUY8 699 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 ZC3H7BQ9UGR2 993 aaKnown RBP16.98■□□□□ 0.31
GPC1-201ENST00000264039 SH3GLB1Q9Y371 365 aa16.98■□□□□ 0.31
GPC1-201ENST00000264039 SMIM31A0A1B0GVY4 71 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 RBP3P10745 1247 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 DOK7Q18PE1 504 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 CYP4A22Q5TCH4 519 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 NET1Q7Z628 596 aaPredicted RBP16.97■□□□□ 0.31
GPC1-201ENST00000264039 TREML1Q86YW5 311 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 FAM136AQ96C01 138 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 MMP19Q99542 508 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 EBF4Q9BQW3 602 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 TEKT3Q9BXF9 490 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 SELENONQ9NZV5 590 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 ZNF232Q9UNY5 417 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 PLA2G4CQ9UP65 541 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 EXOC7Q9UPT5 735 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 PCDHA2Q9Y5H9 948 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 MYH3P11055 1940 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 KBTBD13C9JR72 458 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 KRT38O76015 456 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 NTSR2O95665 410 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 RARBP10826 455 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 EIF2B2P49770 351 aaKnown RBP16.97■□□□□ 0.31
GPC1-201ENST00000264039 C6orf52Q5T4I8 152 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 FAM20AQ96MK3 541 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 SLC24A2Q9UI40 661 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 IVNS1ABPQ9Y6Y0 642 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 RGPD8O14715 1765 aaPredicted RBP16.97■□□□□ 0.31
GPC1-201ENST00000264039 SORBS2O94875 1100 aaKnown RBP16.97■□□□□ 0.31
GPC1-201ENST00000264039 ZFXP17010 805 aaPredicted RBP16.97■□□□□ 0.31
GPC1-201ENST00000264039 ALDH1A3P47895 512 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 EIF3EP60228 445 aaKnown RBP16.97■□□□□ 0.31
GPC1-201ENST00000264039 LSAMPQ13449 338 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 NFIXQ14938 502 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 ACAD11Q709F0 780 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 SLC51AQ86UW1 340 aa16.97■□□□□ 0.31
GPC1-201ENST00000264039 SREK1Q8WXA9 508 aaKnown RBP16.97■□□□□ 0.31
GPC1-201ENST00000264039 BAZ2AQ9UIF9 1905 aaKnown RBP16.96■□□□□ 0.31
GPC1-201ENST00000264039 DENND3A2RUS2 1198 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 TRIM43BA6NCK2 446 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 TTLL13PA6NNM8 815 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 H3BSA7 217 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 TM7SF2O76062 418 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 CYP1A1P04798 512 aaPredicted RBP16.96■□□□□ 0.31
GPC1-201ENST00000264039 FGRP09769 529 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 SPATA31C1P0DKV0 1188 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 PCYT1AP49585 367 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 LIG4P49917 911 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 HADHQ16836 314 aaKnown RBP16.96■□□□□ 0.31
GPC1-201ENST00000264039 LAYNQ6UX15 382 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 TSNARE1Q96NA8 513 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 S100A14Q9HCY8 104 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 RRN3Q9NYV6 651 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 NXF1Q9UBU9 619 aaKnown RBP16.96■□□□□ 0.31
GPC1-201ENST00000264039 LGALS13Q9UHV8 139 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 HEMK1Q9Y5R4 338 aaPredicted RBP16.96■□□□□ 0.31
GPC1-201ENST00000264039 ZNF862O60290 1169 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 APOEP02649 317 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 ACOT2P49753 483 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 DMPKQ09013 629 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 C16orf86Q6ZW13 317 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 EHMT1Q9H9B1 1298 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 KMT5AQ9NQR1 393 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 C20orf96Q9NUD7 363 aaPredicted RBP16.96■□□□□ 0.31
GPC1-201ENST00000264039 BLOC1S6Q9UL45 172 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 PHF24Q9UPV7 400 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 KDM1AO60341 852 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 PPP1R11O60927 126 aaPredicted RBP16.96■□□□□ 0.31
GPC1-201ENST00000264039 RAD17O75943 681 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 ANKRD20A4Q4UJ75 823 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 KLHDC10Q6PID8 442 aa16.96■□□□□ 0.31
GPC1-201ENST00000264039 PDZD8Q8NEN9 1154 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms