RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.57□□□□□ -0.88
MSH4-201ENST00000263187 FAM83AQ86UY5 434 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 SPATA18Q8TC71 538 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 PPP1R13LQ8WUF5 828 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 GPRASP2Q96D09 838 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 SERAC1Q96JX3 654 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 INO80BQ9C086 356 aaPredicted RBP9.57□□□□□ -0.88
MSH4-201ENST00000263187 PORCNQ9H237 461 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 STARD13Q9Y3M8 1113 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 MYH9P35579 1960 aaKnown RBP9.57□□□□□ -0.88
MSH4-201ENST00000263187 FAM237BA0A1B0GVD1 139 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 TYROBPO43914 113 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 UGT1A9O60656 530 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 LPXNO60711 386 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 MT-ND3P03897 115 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 RBP3P10745 1247 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 RGS7P49802 495 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 BACE1P56817 501 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 EIF3EP60228 445 aaKnown RBP9.57□□□□□ -0.88
MSH4-201ENST00000263187 LMNB2Q03252 620 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 RCN2Q14257 317 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 MORF4L2Q15014 288 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 KBTBD12Q3ZCT8 623 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 KHDC1Q4VXA5 237 aaKnown RBP9.57□□□□□ -0.88
MSH4-201ENST00000263187 NAIF1Q69YI7 327 aaPredicted RBP9.57□□□□□ -0.88
MSH4-201ENST00000263187 PRPF39Q86UA1 669 aaKnown RBP9.57□□□□□ -0.88
MSH4-201ENST00000263187 PPM1NQ8N819 430 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 PIWIL1Q96J94 861 aaKnown RBP9.57□□□□□ -0.88
MSH4-201ENST00000263187 RAB3IPQ96QF0 476 aaPredicted RBP9.57□□□□□ -0.88
MSH4-201ENST00000263187 TWNKQ96RR1 684 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 MIPEPQ99797 713 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 MAGEB5Q9BZ81 275 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 UGT1A7Q9HAW7 530 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 UGT1A10Q9HAW8 530 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 UGT1A8Q9HAW9 530 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 PICK1Q9NRD5 415 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 KANSL3Q9P2N6 904 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 ZNF214Q9UL59 606 aaPredicted RBP9.57□□□□□ -0.88
MSH4-201ENST00000263187 AFG3L2Q9Y4W6 797 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 IKBKGQ9Y6K9 419 aa9.57□□□□□ -0.88
MSH4-201ENST00000263187 H7C0C1 242 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 CYB561D2O14569 222 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 PEX11AO75192 247 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 F7P08709 466 aaPredicted RBP9.56□□□□□ -0.88
MSH4-201ENST00000263187 ALADP13716 330 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 ATP5OP48047 213 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 ARL4CP56559 192 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 CCDC6Q16204 474 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 WDR78Q5VTH9 848 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 FYB2Q5VWT5 728 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 ALYREFQ86V81 257 aaKnown RBP9.56□□□□□ -0.88
MSH4-201ENST00000263187 CNKSR2Q8WXI2 1034 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 TRIM6Q9C030 488 aaPredicted RBP9.56□□□□□ -0.88
MSH4-201ENST00000263187 MANSC1Q9H8J5 431 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 C17orf75Q9HAS0 396 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 KBTBD13C9JR72 458 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 ASS1P00966 412 aaKnown RBP9.56□□□□□ -0.88
MSH4-201ENST00000263187 CALB1P05937 261 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 CXCL8P10145 99 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 TBXAS1P24557 533 aaPredicted RBP9.56□□□□□ -0.88
MSH4-201ENST00000263187 PTK7Q13308 1070 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 GNPTABQ3T906 1256 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 CIAPIN1Q6FI81 312 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 TRIM72Q6ZMU5 477 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 CLNKQ7Z7G1 428 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 MICALL2Q8IY33 904 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 SMYD3Q9H7B4 428 aa9.56□□□□□ -0.88
MSH4-201ENST00000263187 E5RJQ4 531 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 KRT36O76013 467 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 ERBB2P04626 1255 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 MIPP30301 263 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 PTDSS1P48651 473 aaKnown RBP9.55□□□□□ -0.88
MSH4-201ENST00000263187 TUBP50607 506 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 CCNHP51946 323 aaPredicted RBP9.55□□□□□ -0.88
MSH4-201ENST00000263187 YARSP54577 528 aaKnown RBP9.55□□□□□ -0.88
MSH4-201ENST00000263187 EEF1DP3Q658K8 133 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 ZCCHC23Q6ZST2 131 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 CDHR3Q6ZTQ4 885 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 PDIK1LQ8N165 341 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 FBXO27Q8NI29 283 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 CCHCR1Q8TD31 782 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 TMEM174Q8WUU8 243 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 JDP2Q8WYK2 163 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 NAF1Q96HR8 494 aaKnown RBP9.55□□□□□ -0.88
MSH4-201ENST00000263187 TTC25Q96NG3 672 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 OSBPL1AQ9BXW6 950 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.55□□□□□ -0.88
MSH4-201ENST00000263187 SMG5Q9UPR3 1016 aaKnown RBP9.55□□□□□ -0.88
MSH4-201ENST00000263187 FER1L6Q2WGJ9 1857 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 DCTN3O75935 186 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 PGK2P07205 417 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 KDELR1P24390 212 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 TCF7P36402 384 aaPredicted RBP9.55□□□□□ -0.88
MSH4-201ENST00000263187 GMPRP36959 345 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 CDH6P55285 790 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 CRYMQ14894 314 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 KPNB1Q14974 876 aaKnown RBP9.55□□□□□ -0.88
MSH4-201ENST00000263187 DUOXA2Q1HG44 320 aa9.55□□□□□ -0.88
MSH4-201ENST00000263187 PPP6R3Q5H9R7 873 aaPredicted RBP9.55□□□□□ -0.88
MSH4-201ENST00000263187 FAM102AQ5T9C2 384 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms