RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 CSNK1G1Q9HCP0 422 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 LUC7L2Q9Y383 392 aaKnown RBP17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 ATP8B3O60423 1300 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 COL6A3P12111 3177 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 THAP12O43422 761 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 AP1G2O75843 785 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 HNRNPA1P09651 372 aaKnown RBP eCLIP17.62■□□□□ 0.418e-6■□□□□ 8.7
CHCHD3-201ENST00000262570 FAM200BP0CF97 657 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 HOXB8P17481 243 aaPredicted RBP17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 ATF6P18850 670 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 GRIK1P39086 918 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 ALDH1A3P47895 512 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 RPL10AP62906 217 aaKnown RBP17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 ZBED6P86452 979 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 DDR2Q16832 855 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 SYCE2Q6PIF2 218 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 TMC6Q7Z403 805 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 TTC30AQ86WT1 665 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 FMNL3Q8IVF7 1028 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 ZNF397Q8NF99 534 aaPredicted RBP17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 CMASQ8NFW8 434 aaPredicted RBP17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 C8orf48Q96LL4 319 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 KCNK16Q96T55 309 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 DUSP16Q9BY84 665 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 SFXN1Q9H9B4 322 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 KRT82Q9NSB4 513 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 AIPL1Q9NZN9 384 aa17.62■□□□□ 0.41
CHCHD3-201ENST00000262570 MTCL1Q9Y4B5 1905 aaKnown RBP17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 CCDC195A0A1B0GUA6 201 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 F8VP50 259 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 TRIM66O15016 1216 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 MED7O43513 233 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 BEST1O76090 585 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 LRG1P02750 347 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 NPR3P17342 541 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 GPR15P49685 360 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 TWF1Q12792 350 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 TBX2Q13207 712 aaPredicted RBP17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 PKDCCQ504Y2 493 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 EP400NLQ6ZTU2 488 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 CLEC20AQ6ZU45 233 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 IRF2BP2Q7Z5L9 587 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 SCN4BQ8IWT1 228 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 C12orf76Q8N812 135 aaPredicted RBP17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 ZMIZ2Q8NF64 920 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 EPS8L1Q8TE68 723 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 DDX1Q92499 740 aaKnown RBP17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 MSLNLQ96KJ4 702 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 SMOQ99835 787 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 PRKD2Q9BZL6 878 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 NUCKS1Q9H1E3 243 aaKnown RBP17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 DMAP1Q9NPF5 467 aaPredicted RBP17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 HESX1Q9UBX0 185 aa17.61■□□□□ 0.41
CHCHD3-201ENST00000262570 BRWD1Q9NSI6 2320 aa17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 SPDYE4A6NLX3 237 aa17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 POU2F2P09086 479 aa17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 CCDC172P0C7W6 258 aa17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 FERP16591 822 aa17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 PDE6CP51160 858 aa17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 ARID5AQ03989 594 aa17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 PLD1Q13393 1074 aa17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 SKIV2LQ15477 1246 aaKnown RBP17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 MEA1Q16626 185 aa17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 GOLGA7BQ2TAP0 167 aa17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 SFMBT2Q5VUG0 894 aa17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 E4F1Q66K89 784 aaPredicted RBP17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 NOP9Q86U38 636 aaKnown RBP17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 GPIHBP1Q8IV16 184 aa17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 MAFAQ8NHW3 353 aaPredicted RBP17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 SYN2Q92777 582 aaPredicted RBP17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 ZNF707Q96C28 371 aaPredicted RBP17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 CEP295NLQ96MC4 621 aa17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 NOCTQ9UK39 431 aaKnown RBP17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 PCDHGC3Q9UN70 934 aa17.6■□□□□ 0.41
CHCHD3-201ENST00000262570 PTPRDP23468 1912 aa17.59■□□□□ 0.41
CHCHD3-201ENST00000262570 CCL16O15467 120 aa17.59■□□□□ 0.41
CHCHD3-201ENST00000262570 MICAL2O94851 1124 aa17.59■□□□□ 0.41
CHCHD3-201ENST00000262570 CFHP08603 1231 aa17.59■□□□□ 0.41
CHCHD3-201ENST00000262570 CDC25BP30305 580 aa17.59■□□□□ 0.41
CHCHD3-201ENST00000262570 KRT9P35527 623 aa17.59■□□□□ 0.41
CHCHD3-201ENST00000262570 BCAT1P54687 386 aa17.59■□□□□ 0.41
CHCHD3-201ENST00000262570 MAP3K7CLP57077 242 aa17.59■□□□□ 0.41
CHCHD3-201ENST00000262570 GSE1Q14687 1217 aa17.59■□□□□ 0.41
CHCHD3-201ENST00000262570 SDHAF4Q5VUM1 108 aa17.59■□□□□ 0.41
CHCHD3-201ENST00000262570 TMC5Q6UXY8 1006 aa17.59■□□□□ 0.41
CHCHD3-201ENST00000262570 ZNF677Q86XU0 584 aa17.59■□□□□ 0.41
CHCHD3-201ENST00000262570 FEZF2Q8TBJ5 459 aa17.59■□□□□ 0.41
CHCHD3-201ENST00000262570 SPATA17Q96L03 361 aa17.59■□□□□ 0.41
CHCHD3-201ENST00000262570 S1PR5Q9H228 398 aa17.59■□□□□ 0.41
CHCHD3-201ENST00000262570 UBE2ZQ9H832 354 aaPredicted RBP17.59■□□□□ 0.41
CHCHD3-201ENST00000262570 TPM1P09493 284 aa17.58■□□□□ 0.41
CHCHD3-201ENST00000262570 ANXA13P27216 316 aa17.58■□□□□ 0.41
CHCHD3-201ENST00000262570 SSTR3P32745 418 aaPredicted RBP17.58■□□□□ 0.41
CHCHD3-201ENST00000262570 GPD2P43304 727 aa17.58■□□□□ 0.41
CHCHD3-201ENST00000262570 EPHB3P54753 998 aa17.58■□□□□ 0.41
CHCHD3-201ENST00000262570 PDE4CQ08493 712 aa17.58■□□□□ 0.41
CHCHD3-201ENST00000262570 BST2Q10589 180 aaKnown RBP17.58■□□□□ 0.41
CHCHD3-201ENST00000262570 ARID5BQ14865 1188 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms