RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 PCSK1P29120 753 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 PSMC1P62191 440 aaKnown RBP12.32□□□□□ -0.44
PFDN1-201ENST00000261813 TSPY1Q01534 308 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 ADCY1Q08828 1119 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 INCA1Q0VD86 236 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 SYCP1Q15431 976 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 HS1BP3Q53T59 392 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 TMEM31Q5JXX7 168 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 CNGA4Q8IV77 575 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 ARHGEF19Q8IW93 802 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 SCUBE3Q8IX30 993 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 DCP1BQ8IZD4 617 aaKnown RBP12.32□□□□□ -0.44
PFDN1-201ENST00000261813 NEK11Q8NG66 645 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 HDAC7Q8WUI4 952 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 TRIM44Q96DX7 344 aaPredicted RBP12.32□□□□□ -0.44
PFDN1-201ENST00000261813 FAXDC2Q96IV6 333 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 NT5C1BQ96P26 610 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 TWNKQ96RR1 684 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 LPIN3Q9BQK8 851 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 CRACR2AQ9BSW2 395 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 S1PR5Q9H228 398 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 SFXN1Q9H9B4 322 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 CYP3A43Q9HB55 503 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 SLC24A3Q9HC58 644 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 PLCB1Q9NQ66 1216 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 CRTAC1Q9NQ79 661 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 GCNT4Q9P109 453 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 HMGXB4Q9UGU5 601 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 GTF3C4Q9UKN8 822 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 CDH9Q9ULB4 789 aa12.32□□□□□ -0.44
PFDN1-201ENST00000261813 A0A1W2PQJ5 194 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 PAPLNO95428 1278 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 HOXB8P17481 243 aaPredicted RBP12.31□□□□□ -0.44
PFDN1-201ENST00000261813 CD58P19256 250 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 SLC9A1P19634 815 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 NDST1P52848 882 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 APBA1Q02410 837 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 ORC1Q13415 861 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 CUL2Q13617 745 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 PUS10Q3MIT2 529 aaKnown RBP12.31□□□□□ -0.44
PFDN1-201ENST00000261813 LEXMQ3ZCV2 418 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 RARS2Q5T160 578 aaKnown RBP12.31□□□□□ -0.44
PFDN1-201ENST00000261813 LIN9Q5TKA1 542 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 FAM171BQ6P995 826 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 TMC5Q6UXY8 1006 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 TCEAL8Q8IYN2 117 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 TTC9BQ8N6N2 239 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 UBR7Q8N806 425 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 SPC24Q8NBT2 197 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 ATAD1Q8NBU5 361 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 SMRP1Q8NCR6 262 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.31□□□□□ -0.44
PFDN1-201ENST00000261813 SLC7A14Q8TBB6 771 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 WHAMMQ8TF30 809 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 KAT5Q92993 513 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 LRFN3Q9BTN0 628 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 CYP4F11Q9HBI6 524 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 DPP7Q9UHL4 492 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 CD207Q9UJ71 328 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 CDH22Q9UJ99 828 aa12.31□□□□□ -0.44
PFDN1-201ENST00000261813 CCDC195A0A1B0GUA6 201 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 AKR1B15C9JRZ8 316 aaPredicted RBP12.3□□□□□ -0.44
PFDN1-201ENST00000261813 CILPO75339 1184 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 PTPN1P18031 435 aaKnown RBP12.3□□□□□ -0.44
PFDN1-201ENST00000261813 PON1P27169 355 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 ELF1P32519 619 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 KCNMA1Q12791 1236 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 DUSP4Q13115 394 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 TBX2Q13207 712 aaPredicted RBP12.3□□□□□ -0.44
PFDN1-201ENST00000261813 PHLDB3Q6NSJ2 640 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 DPY19L2P1Q6NXN4 242 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 TRIM65Q6PJ69 517 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 ELMSAN1Q6PJG2 1045 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 CCDC149Q6ZUS6 474 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 UNC93AQ86WB7 457 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 PARP9Q8IXQ6 854 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 B3GALNT2Q8NCR0 500 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 CMASQ8NFW8 434 aaPredicted RBP12.3□□□□□ -0.44
PFDN1-201ENST00000261813 MYLPFQ96A32 169 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 ZNF707Q96C28 371 aaPredicted RBP12.3□□□□□ -0.44
PFDN1-201ENST00000261813 ELOVL4Q9GZR5 314 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 SIX2Q9NPC8 291 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 CISHQ9NSE2 258 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 ZDHHC7Q9NXF8 308 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 ABI2Q9NYB9 513 aaPredicted RBP12.3□□□□□ -0.44
PFDN1-201ENST00000261813 MAFFQ9ULX9 164 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 MYO6Q9UM54 1294 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 CAPN11Q9UMQ6 739 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 SIK3Q9Y2K2 1263 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 SLC27A5Q9Y2P5 690 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 LUC7L2Q9Y383 392 aaKnown RBP12.3□□□□□ -0.44
PFDN1-201ENST00000261813 YIPF1Q9Y548 306 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 INSL5Q9Y5Q6 135 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 PRRG1O14668 218 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 MBTPS2O43462 519 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 SOAT2O75908 522 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 ACO1P21399 889 aaKnown RBP12.3□□□□□ -0.44
PFDN1-201ENST00000261813 TBXAS1P24557 533 aaPredicted RBP12.3□□□□□ -0.44
PFDN1-201ENST00000261813 HOXA9P31269 272 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 SSTR3P32745 418 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms