RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 NHEJ1Q9H9Q4 299 aaPredicted RBP19.94■□□□□ 0.78
COL4A3BP-201ENST00000261415 RBM12Q9NTZ6 932 aaKnown RBP19.94■□□□□ 0.78
COL4A3BP-201ENST00000261415 AIPL1Q9NZN9 384 aa19.94■□□□□ 0.78
COL4A3BP-201ENST00000261415 G3BP2Q9UN86 482 aaKnown RBP19.94■□□□□ 0.78
COL4A3BP-201ENST00000261415 LRRC42Q9Y546 428 aa19.94■□□□□ 0.78
COL4A3BP-201ENST00000261415 E7ENQ6 273 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 ASS1P00966 412 aaKnown RBP19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 KRT19P08727 400 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 MYL6P60660 151 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 ZBTB6Q15916 424 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 DBN1Q16643 649 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 MRPL10Q7Z7H8 261 aaKnown RBP19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 CXorf38Q8TB03 319 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 LPPQ93052 612 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 WNT8AQ9H1J5 351 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 APOBEC3GQ9HC16 384 aaKnown RBP19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 TBX21Q9UL17 535 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 SMIM28A0A1B0GU29 152 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 WFS1O76024 890 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 KCNE1P15382 129 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 MFAP3P55082 362 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 CDK17Q00537 523 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 GCNT1Q02742 428 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 USP4Q13107 963 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 ERMARDQ5T6L9 678 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 RGS18Q9NS28 235 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 RNF19AQ9NV58 838 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 DPP3Q9NY33 737 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 TTC3P53804 2025 aa19.93■□□□□ 0.78
COL4A3BP-201ENST00000261415 ATF7P17544 494 aaPredicted RBP19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 STAT1P42224 750 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 ARID5AQ03989 594 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 ASIC2Q16515 512 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 PLEKHG4Q58EX7 1191 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 PIGWQ7Z7B1 504 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 ERICH1Q86X53 443 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 GBP7Q8N8V2 638 aaPredicted RBP19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 LINC01599Q8WXQ3 324 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 SCLYQ96I15 445 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 ZFP42Q96MM3 310 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 XYLT2Q9H1B5 865 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 SAMD15Q9P1V8 674 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 ARHGAP20Q9P2F6 1191 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 TUBGCP4Q9UGJ1 667 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 ITGA11Q9UKX5 1188 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 NUB1Q9Y5A7 615 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 CLTBP09497 229 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 SOX5P35711 763 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 CCL23P55773 120 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 MTMR3Q13615 1198 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 ACBD5Q5T8D3 534 aaPredicted RBP19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 HGSNATQ68CP4 663 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 AGMOQ6ZNB7 445 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 RTN4RL1Q86UN2 441 aaPredicted RBP19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 C18orf25Q96B23 403 aaPredicted RBP19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 TRAPPC9Q96Q05 1148 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 XPO6Q96QU8 1125 aaKnown RBP19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 TSPAN18Q96SJ8 248 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 FTHL17Q9BXU8 183 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 UBQLN1Q9UMX0 589 aaKnown RBP19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 DUSP10Q9Y6W6 482 aa19.92■□□□□ 0.78
COL4A3BP-201ENST00000261415 H0YGN5 161 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 PLEKP08567 350 aaPredicted RBP19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 SKIP12755 728 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 POLR2BP30876 1174 aaKnown RBP19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 CYP2C18P33260 490 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 MLH1P40692 756 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 CD151P48509 253 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 ZNF699Q32M78 642 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 ANO7Q6IWH7 933 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 DBF4BQ8NFT6 615 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 FAM81BQ96LP2 452 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 VCXQ9H320 206 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 TMEM39AQ9NV64 488 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 GIT1Q9Y2X7 761 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 NFS1Q9Y697 457 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 LTBP2Q14767 1821 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 FOXN3O00409 490 aaPredicted RBP19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 PTGESO14684 152 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 GFPT2O94808 682 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 CTNNA1P35221 906 aaKnown RBP19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 ENOSF1Q7L5Y1 443 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 IRF2BP2Q7Z5L9 587 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 ECHDC2Q86YB7 292 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 MYLK4Q86YV6 388 aaPredicted RBP19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 RNF169Q8NCN4 708 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 BEST2Q8NFU1 509 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 SHC3Q92529 594 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 FAM129AQ9BZQ8 928 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 CTNNAL1Q9UBT7 734 aa19.91■□□□□ 0.78
COL4A3BP-201ENST00000261415 C9IYK1 514 aa19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 PARNO95453 639 aaKnown RBP19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 SERPING1P05155 500 aa19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 HSD17B3P37058 310 aa19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 ZNF844Q08AG5 666 aa19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 SLC24A5Q71RS6 500 aa19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 GSTCDQ8NEC7 633 aa19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 CASKIN2Q8WXE0 1202 aa19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 PGBD4Q96DM1 585 aa19.9■□□□□ 0.78
COL4A3BP-201ENST00000261415 GAD1Q99259 594 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms