RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 PVALEFA0A1B0GWK0 134 aa20.33■□□□□ 0.85
TM6SF1-201ENST00000258909 ARSAP15289 507 aa20.33■□□□□ 0.85
TM6SF1-201ENST00000258909 PPP2R5DQ14738 602 aa20.33■□□□□ 0.85
TM6SF1-201ENST00000258909 LPAL2Q16609 132 aa20.33■□□□□ 0.85
TM6SF1-201ENST00000258909 KNOP1Q1ED39 458 aaKnown RBP20.33■□□□□ 0.85
TM6SF1-201ENST00000258909 BMT2Q1RMZ1 405 aa20.33■□□□□ 0.85
TM6SF1-201ENST00000258909 ATL3Q6DD88 541 aa20.33■□□□□ 0.85
TM6SF1-201ENST00000258909 C4orf50Q6ZRC1 276 aa20.33■□□□□ 0.85
TM6SF1-201ENST00000258909 SPEM1Q8N4L4 309 aa20.33■□□□□ 0.85
TM6SF1-201ENST00000258909 RMDN1Q96DB5 314 aa20.33■□□□□ 0.85
TM6SF1-201ENST00000258909 FAM126AQ9BYI3 521 aaPredicted RBP20.33■□□□□ 0.85
TM6SF1-201ENST00000258909 PTPRDP23468 1912 aa20.32■□□□□ 0.84
TM6SF1-201ENST00000258909 KLRC4O43908 158 aa20.32■□□□□ 0.84
TM6SF1-201ENST00000258909 EXOC3O60645 756 aa20.32■□□□□ 0.84
TM6SF1-201ENST00000258909 GNL1P36915 607 aaPredicted RBP20.32■□□□□ 0.84
TM6SF1-201ENST00000258909 GRIK1P39086 918 aa20.32■□□□□ 0.84
TM6SF1-201ENST00000258909 MAGEA11P43364 429 aa20.32■□□□□ 0.84
TM6SF1-201ENST00000258909 SNRPFP62306 86 aaKnown RBP20.32■□□□□ 0.84
TM6SF1-201ENST00000258909 RUNX3Q13761 415 aa20.32■□□□□ 0.84
TM6SF1-201ENST00000258909 CCINQ13939 588 aa20.32■□□□□ 0.84
TM6SF1-201ENST00000258909 WDR72Q3MJ13 1102 aa20.32■□□□□ 0.84
TM6SF1-201ENST00000258909 MDH1BQ5I0G3 518 aa20.32■□□□□ 0.84
TM6SF1-201ENST00000258909 DGKKQ5KSL6 1271 aa20.32■□□□□ 0.84
TM6SF1-201ENST00000258909 OR6B3Q8NGW1 331 aa20.32■□□□□ 0.84
TM6SF1-201ENST00000258909 PLEKHO2Q8TD55 490 aa20.32■□□□□ 0.84
TM6SF1-201ENST00000258909 CHFRQ96EP1 664 aa20.32■□□□□ 0.84
TM6SF1-201ENST00000258909 PAGE5Q96GU1 130 aa20.32■□□□□ 0.84
TM6SF1-201ENST00000258909 PCED1BQ96HM7 432 aa20.32■□□□□ 0.84
TM6SF1-201ENST00000258909 SNX25Q9H3E2 840 aa20.32■□□□□ 0.84
TM6SF1-201ENST00000258909 A0A1B0GVL5 298 aa20.31■□□□□ 0.84
TM6SF1-201ENST00000258909 C2orf78A6NCI8 922 aa20.31■□□□□ 0.84
TM6SF1-201ENST00000258909 CHURC1-FNTBB4DL54 471 aa20.31■□□□□ 0.84
TM6SF1-201ENST00000258909 ACTN4O43707 911 aaKnown RBP20.31■□□□□ 0.84
TM6SF1-201ENST00000258909 CKMP06732 381 aa20.31■□□□□ 0.84
TM6SF1-201ENST00000258909 SLFN14P0C7P3 912 aa20.31■□□□□ 0.84
TM6SF1-201ENST00000258909 FNTBP49356 437 aa20.31■□□□□ 0.84
TM6SF1-201ENST00000258909 NRLP54845 237 aa20.31■□□□□ 0.84
TM6SF1-201ENST00000258909 MYL6P60660 151 aa20.31■□□□□ 0.84
TM6SF1-201ENST00000258909 STK4Q13043 487 aa20.31■□□□□ 0.84
TM6SF1-201ENST00000258909 TRPC3Q13507 836 aa20.31■□□□□ 0.84
TM6SF1-201ENST00000258909 HEATR6Q6AI08 1181 aaKnown RBP20.31■□□□□ 0.84
TM6SF1-201ENST00000258909 CC2D1AQ6P1N0 951 aaPredicted RBP20.31■□□□□ 0.84
TM6SF1-201ENST00000258909 ELMO3Q96BJ8 720 aa20.31■□□□□ 0.84
TM6SF1-201ENST00000258909 DPEP3Q9H4B8 488 aa20.31■□□□□ 0.84
TM6SF1-201ENST00000258909 KIF9Q9HAQ2 790 aa20.31■□□□□ 0.84
TM6SF1-201ENST00000258909 NXF1Q9UBU9 619 aaKnown RBP20.31■□□□□ 0.84
TM6SF1-201ENST00000258909 CACNA1AO00555 2505 aa20.31■□□□□ 0.84
TM6SF1-201ENST00000258909 TRAV19A0A0A6YYK7 116 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 USP46P62068 366 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 TNNC1P63316 161 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 SRSF5Q13243 272 aaKnown RBP20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 NAIF1Q69YI7 327 aaPredicted RBP20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 C12orf56Q8IXR9 622 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 ARL14EPQ8N8R7 260 aaPredicted RBP20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 KIAA0895Q8NCT3 520 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 MYCBPAPQ8TBZ2 947 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 SOBPA7XYQ1 873 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 K7ESF4 209 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 PHACTR2O75167 634 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 CLSTN1O94985 981 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 USP17L7P0C7H9 530 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 PFKFB1P16118 471 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 FAM160A1Q05DH4 1040 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 ZNF268Q14587 947 aaPredicted RBP20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 MTF1Q14872 753 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 MAPRE1Q15691 268 aaKnown RBP20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 KMT5BQ4FZB7 885 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 PKN3Q6P5Z2 889 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 VSTM1Q6UX27 236 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 PRR23BQ6ZRT6 265 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 FBRSL1Q9HCM7 1045 aaKnown RBP20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 EXOC1Q9NV70 894 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 CGNQ9P2M7 1197 aaKnown RBP20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 WNT6Q9Y6F9 365 aa20.3■□□□□ 0.84
TM6SF1-201ENST00000258909 TACC1O75410 805 aa20.29■□□□□ 0.84
TM6SF1-201ENST00000258909 ANXA13P27216 316 aa20.29■□□□□ 0.84
TM6SF1-201ENST00000258909 CACNA2D1P54289 1103 aa20.29■□□□□ 0.84
TM6SF1-201ENST00000258909 BIRC3Q13489 604 aa20.29■□□□□ 0.84
TM6SF1-201ENST00000258909 FSTL4Q6MZW2 842 aa20.29■□□□□ 0.84
TM6SF1-201ENST00000258909 FSIP1Q8NA03 581 aa20.29■□□□□ 0.84
TM6SF1-201ENST00000258909 SPATA17Q96L03 361 aa20.29■□□□□ 0.84
TM6SF1-201ENST00000258909 XYLT2Q9H1B5 865 aa20.29■□□□□ 0.84
TM6SF1-201ENST00000258909 GCNT4Q9P109 453 aa20.29■□□□□ 0.84
TM6SF1-201ENST00000258909 ZDHHC9Q9Y397 364 aa20.29■□□□□ 0.84
TM6SF1-201ENST00000258909 LRRIQ3A6PVS8 624 aaPredicted RBP20.28■□□□□ 0.84
TM6SF1-201ENST00000258909 A8MXQ7 604 aa20.28■□□□□ 0.84
TM6SF1-201ENST00000258909 F8VP50 259 aa20.28■□□□□ 0.84
TM6SF1-201ENST00000258909 CLDN5O00501 218 aa20.28■□□□□ 0.84
TM6SF1-201ENST00000258909 HRO43593 1189 aa20.28■□□□□ 0.84
TM6SF1-201ENST00000258909 PTPN1P18031 435 aaKnown RBP20.28■□□□□ 0.84
TM6SF1-201ENST00000258909 HDCP19113 662 aa20.28■□□□□ 0.84
TM6SF1-201ENST00000258909 KCNB1Q14721 858 aa20.28■□□□□ 0.84
TM6SF1-201ENST00000258909 ZNF77Q15935 545 aa20.28■□□□□ 0.84
TM6SF1-201ENST00000258909 TMEM196Q5HYL7 178 aa20.28■□□□□ 0.84
TM6SF1-201ENST00000258909 TDRD10Q5VZ19 366 aaKnown RBP20.28■□□□□ 0.84
TM6SF1-201ENST00000258909 DENND5BQ6ZUT9 1274 aa20.28■□□□□ 0.84
TM6SF1-201ENST00000258909 SH3RF2Q8TEC5 729 aa20.28■□□□□ 0.84
TM6SF1-201ENST00000258909 SPATA32Q96LK8 384 aa20.28■□□□□ 0.84
TM6SF1-201ENST00000258909 ZNF518BQ9C0D4 1074 aa20.28■□□□□ 0.84
TM6SF1-201ENST00000258909 TMEM30AQ9NV96 361 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms