RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 CAPN7Q9Y6W3 813 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 ZNFX1Q9P2E3 1918 aaKnown RBP9.55□□□□□ -0.88
CKAP2-201ENST00000258607 SOAT2O75908 522 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 FAM155BO75949 473 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 GZMAP12544 262 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 MUTP22033 750 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 TBXAS1P24557 533 aaPredicted RBP9.55□□□□□ -0.88
CKAP2-201ENST00000258607 CHRNA3P32297 505 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 FLT3LGP49771 235 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 EIF3EP60228 445 aaKnown RBP9.55□□□□□ -0.88
CKAP2-201ENST00000258607 SOX4Q06945 474 aaPredicted RBP9.55□□□□□ -0.88
CKAP2-201ENST00000258607 SPRYD7Q5W111 196 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 CYP4X1Q8N118 509 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 OTUD6BQ8N6M0 293 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 ERLEC1Q96DZ1 483 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 MS4A4AQ96JQ5 239 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 PPP1R36Q96LQ0 422 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 FBXL18Q96ME1 805 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 PARK7Q99497 189 aaKnown RBP9.55□□□□□ -0.88
CKAP2-201ENST00000258607 SYT11Q9BT88 431 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 TRMT13Q9NUP7 481 aaKnown RBP9.55□□□□□ -0.88
CKAP2-201ENST00000258607 PRMT7Q9NVM4 692 aaPredicted RBP9.55□□□□□ -0.88
CKAP2-201ENST00000258607 UVRAGQ9P2Y5 699 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 STK38LQ9Y2H1 464 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 ZC3H4Q9UPT8 1303 aaKnown RBP9.55□□□□□ -0.88
CKAP2-201ENST00000258607 TNS1Q9HBL0 1735 aaKnown RBP9.55□□□□□ -0.88
CKAP2-201ENST00000258607 RASA4BC9J798 803 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 RASA4O43374 803 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 KITP10721 976 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 CXCR3P49682 368 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 ADIGQ0VDE8 80 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 MYO1EQ12965 1108 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 BMPR2Q13873 1038 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 RWDD4Q6NW29 188 aaKnown RBP9.55□□□□□ -0.88
CKAP2-201ENST00000258607 ZDHHC24Q6UX98 284 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 SLFN11Q7Z7L1 901 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 PALM2Q8IXS6 379 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 SLC4A11Q8NBS3 891 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 CELF6Q96J87 481 aaKnown RBP9.55□□□□□ -0.88
CKAP2-201ENST00000258607 NT5C1AQ9BXI3 368 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 NIFKQ9BYG3 293 aaKnown RBP9.55□□□□□ -0.88
CKAP2-201ENST00000258607 ATXN3LQ9H3M9 355 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 HCSTQ9UBK5 93 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 MARCOQ9UEW3 520 aaPredicted RBP9.55□□□□□ -0.88
CKAP2-201ENST00000258607 DCTN4Q9UJW0 460 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 GJD2Q9UKL4 321 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 NEU2Q9Y3R4 380 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 CNTRLQ7Z7A1 2325 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 SCN1AP35498 2009 aa9.55□□□□□ -0.88
CKAP2-201ENST00000258607 SPTLC1O15269 473 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 P4HA2O15460 535 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 LRCH4O75427 683 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 HMGCRP04035 888 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 CYP1A2P05177 515 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 BRAFP15056 766 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 CD52P31358 61 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 CUL1Q13616 776 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 MFSD10Q14728 455 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 MDH1BQ5I0G3 518 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 RFX8Q6ZV50 586 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 TMCO2Q7Z6W1 182 aaPredicted RBP9.54□□□□□ -0.88
CKAP2-201ENST00000258607 PNMA8AQ86V59 439 aaPredicted RBP9.54□□□□□ -0.88
CKAP2-201ENST00000258607 UNC5BQ8IZJ1 945 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 ARRDC4Q8NCT1 418 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 DDX27Q96GQ7 796 aaKnown RBP9.54□□□□□ -0.88
CKAP2-201ENST00000258607 CCT8L2Q96SF2 557 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 DCLK3Q9C098 648 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 XYLT2Q9H1B5 865 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 C2orf40Q9H1Z8 148 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 ABHD16BQ9H3Z7 469 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 SLITRK6Q9H5Y7 841 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 FGFR1OP2Q9NVK5 253 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 GRHL1Q9NZI5 618 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 TSR3Q9UJK0 312 aaKnown RBP9.54□□□□□ -0.88
CKAP2-201ENST00000258607 USP18Q9UMW8 372 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 PPP2R3BQ9Y5P8 575 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 FAM169AQ9Y6X4 670 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 MYO15AQ9UKN7 3530 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 MEFVO15553 781 aaPredicted RBP9.54□□□□□ -0.88
CKAP2-201ENST00000258607 ATP8B1O43520 1251 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 PPFIA4O75335 1185 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 TOP3BO95985 862 aaKnown RBP9.54□□□□□ -0.88
CKAP2-201ENST00000258607 TUBBP07437 444 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 MMP8P22894 467 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 AMPD1P23109 780 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 EIF4BP23588 611 aaKnown RBP9.54□□□□□ -0.88
CKAP2-201ENST00000258607 GRIA1P42261 906 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 AP1B1Q10567 949 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 SPOCD1Q6ZMY3 1216 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 KIF2BQ8N4N8 673 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 SLC17A8Q8NDX2 589 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 USP6NLQ92738 828 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 WNT8BQ93098 351 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 NCANO14594 1321 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 CHD7Q9P2D1 2997 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 RPS6KA5O75582 802 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 BEST1O76090 585 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 SDC4P31431 198 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 STX2P32856 288 aa9.54□□□□□ -0.88
CKAP2-201ENST00000258607 GNL1P36915 607 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms