RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 SPTLC2O15270 562 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 TEX33O43247 280 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 DNPH1O43598 174 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 GNAI2P04899 355 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 APOA4P06727 396 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 DBHP09172 617 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 IL2RBP14784 551 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 SLC11A2P49281 568 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 IL13RA1P78552 427 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 CALD1Q05682 793 aaKnown RBP5.62□□□□□ -1.51
TCN1-201ENST00000257264 NSUN2Q08J23 767 aaKnown RBP eCLIP5.62□□□□□ -1.51
TCN1-201ENST00000257264 BECN1Q14457 450 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 SMAD1Q15797 465 aaKnown RBP5.62□□□□□ -1.51
TCN1-201ENST00000257264 CPSF6Q16630 551 aaKnown RBP eCLIP5.62□□□□□ -1.51
TCN1-201ENST00000257264 SLC5A9Q2M3M2 681 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 RAP1GAP2Q684P5 730 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 GRAMD4Q6IC98 578 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 RRAGAQ7L523 313 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 RAB11FIP2Q7L804 512 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 MIB1Q86YT6 1006 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 CCDC28AQ8IWP9 274 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 TBC1D22AQ8WUA7 517 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 STON2Q8WXE9 905 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 GOLGA1Q92805 767 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 NSUN4Q96CB9 384 aaKnown RBP5.62□□□□□ -1.51
TCN1-201ENST00000257264 CFAP53Q96M91 514 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 ARHGAP39Q9C0H5 1083 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 PDCL3Q9H2J4 239 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 ACAD9Q9H845 621 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 CARS2Q9HA77 564 aaKnown RBP5.62□□□□□ -1.51
TCN1-201ENST00000257264 UPF2Q9HAU5 1272 aaKnown RBP5.62□□□□□ -1.51
TCN1-201ENST00000257264 GPRC5DQ9NZD1 345 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 LMCD1Q9NZU5 365 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 SLAMF8Q9P0V8 285 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 PLEKHM1Q9Y4G2 1056 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 EFCAB6Q5THR3 1501 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 CENPJQ9HC77 1338 aaPredicted RBP5.62□□□□□ -1.51
TCN1-201ENST00000257264 CFAP74Q9C0B2 1584 aa5.62□□□□□ -1.51
TCN1-201ENST00000257264 POLR3AO14802 1390 aaPredicted RBP5.61□□□□□ -1.51
TCN1-201ENST00000257264 ADGRL1O94910 1474 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 ERVK-7P63135 1459 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 LMTK2Q8IWU2 1503 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 RAB27BO00194 218 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 TSPAN3O60637 253 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 UNC5CO95185 931 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 NTSR2O95665 410 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 SCGB1D1O95968 90 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 GJB1P08034 283 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 CNPP09543 421 aaKnown RBP5.61□□□□□ -1.51
TCN1-201ENST00000257264 TGFB3P10600 412 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 MTHFD1P11586 935 aaKnown RBP5.61□□□□□ -1.51
TCN1-201ENST00000257264 ACVR2AP27037 513 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 WNT3AP56704 352 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 NKX3-2P78367 333 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 CDC16Q13042 620 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 IKZF1Q13422 519 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 BAK1Q16611 211 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 PABPC1LQ4VXU2 614 aaKnown RBP5.61□□□□□ -1.51
TCN1-201ENST00000257264 RALGPS1Q5JS13 557 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 HECTD3Q5T447 861 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 C20orf194Q5TEA3 1177 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 FAXCQ5TGI0 409 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 ZNF385CQ66K41 422 aaPredicted RBP5.61□□□□□ -1.51
TCN1-201ENST00000257264 MRNIPQ6NTE8 343 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 LIPIQ6XZB0 460 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 TEX11Q8IYF3 940 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 AFAP1Q8N556 730 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 USP38Q8NB14 1042 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 PIK3C3Q8NEB9 887 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 IL17RDQ8NFM7 739 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 CREB3L4Q8TEY5 395 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 UIMC1Q96RL1 719 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 REEP2Q9BRK0 252 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 TXLNGYQ9BZA5 131 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 C11orf54Q9H0W9 315 aaPredicted RBP5.61□□□□□ -1.51
TCN1-201ENST00000257264 ABHD16BQ9H3Z7 469 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 CHODLQ9H9P2 273 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 EIF2B3Q9NR50 452 aaKnown RBP5.61□□□□□ -1.51
TCN1-201ENST00000257264 RLIMQ9NVW2 624 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 SPATA6Q9NWH7 488 aaPredicted RBP5.61□□□□□ -1.51
TCN1-201ENST00000257264 RBPJLQ9UBG7 517 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 TMEM59LQ9UK28 342 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 CAPN11Q9UMQ6 739 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 DERAQ9Y315 318 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 ACTL7AQ9Y615 435 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 ZMYM3Q14202 1370 aa5.61□□□□□ -1.51
TCN1-201ENST00000257264 USP32Q8NFA0 1604 aa5.6□□□□□ -1.51
TCN1-201ENST00000257264 FITM1A5D6W6 292 aa5.6□□□□□ -1.51
TCN1-201ENST00000257264 PRSS29PA6NIE9 313 aa5.6□□□□□ -1.51
TCN1-201ENST00000257264 E7EVH7 732 aa5.6□□□□□ -1.51
TCN1-201ENST00000257264 H7C0S8 307 aa5.6□□□□□ -1.51
TCN1-201ENST00000257264 AP3D1O14617 1153 aa5.6□□□□□ -1.51
TCN1-201ENST00000257264 GRM6O15303 877 aa5.6□□□□□ -1.51
TCN1-201ENST00000257264 COBLO75128 1261 aa5.6□□□□□ -1.51
TCN1-201ENST00000257264 COQ9O75208 318 aa5.6□□□□□ -1.51
TCN1-201ENST00000257264 KRT38O76015 456 aa5.6□□□□□ -1.51
TCN1-201ENST00000257264 CSF1P09603 554 aa5.6□□□□□ -1.51
TCN1-201ENST00000257264 ACADMP11310 421 aa5.6□□□□□ -1.51
TCN1-201ENST00000257264 CKBP12277 381 aa5.6□□□□□ -1.51
TCN1-201ENST00000257264 PECAM1P16284 738 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms