RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 C1orf232A0A0U1RR37 186 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 PIPSLA2A3N6 862 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 TM9SF1O15321 606 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 PER1O15534 1290 aaPredicted RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 NCK2O43639 380 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 KLHL18O94889 574 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 S100A6P06703 90 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 ZCCHC18P0CG32 403 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 NUDT2P50583 147 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 MTTPP55157 894 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 RPS6P62753 249 aaKnown RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 PIGHQ14442 188 aaPredicted RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 PREPLQ4J6C6 727 aaPredicted RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 RNF219Q5W0B1 726 aaPredicted RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 PMF1Q6P1K2 205 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 FAM20AQ96MK3 541 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 AGPAT1Q99943 283 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 BDH2Q9BUT1 245 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 PABPC3Q9H361 631 aaKnown RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 SAR1AQ9NR31 198 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 ARHGEF38Q9NXL2 777 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 ING3Q9NXR8 418 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 MRPL39Q9NYK5 338 aaKnown RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 ATXN10Q9UBB4 475 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 A0A1W2PRG6 482 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 K7ERI5 159 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 CD58P19256 250 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 FASP25445 335 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 IL12AP29459 219 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 NCALDP61601 193 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 OTUD4Q01804 1114 aaKnown RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 FAM117BQ6P1L5 589 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 LRRC34Q8IZ02 419 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 GIMAP8Q8ND71 665 aaPredicted RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 ATXN2LQ8WWM7 1075 aaKnown RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 REXO4Q9GZR2 422 aaKnown RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 C2orf40Q9H1Z8 148 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 USP27XA6NNY8 438 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 MEI4A8MW99 385 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 POLBP06746 335 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 VIL1P09327 827 aaKnown RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 NFX1Q12986 1120 aaKnown RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 USP10Q14694 798 aaKnown RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 LONRF1Q17RB8 773 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 KRT24Q2M2I5 525 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 SWT1Q5T5J6 900 aaKnown RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 ZNF618Q5T7W0 954 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 CACHD1Q5VU97 1274 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 TAS2R42Q7RTR8 314 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 TRAPPC11Q7Z392 1133 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 KCTD17Q8N5Z5 321 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 C11orf70Q9BRQ4 267 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 DEFB129Q9H1M3 183 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 TASP1Q9H6P5 420 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 SP110Q9HB58 689 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 TMBIM4Q9HC24 238 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 CREBZFQ9NS37 354 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 TMCO1Q9UM00 188 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 CARD8Q9Y2G2 431 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 R3HDM2Q9Y2K5 976 aaKnown RBP8.5□□□□□ -1.05
DSG3-201ENST00000257189 PCDHB6Q9Y5E3 794 aa8.5□□□□□ -1.05
DSG3-201ENST00000257189 CCDC162PA2VCL2 907 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 ZBTB22O15209 634 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 TLR2O60603 784 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 SLC25A27O95847 323 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 GNRH1P01148 92 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 JAK1P23458 1154 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 HSD17B4P51659 736 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 VAMP7P51809 220 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 ZNF211Q13398 564 aaPredicted RBP8.49□□□□□ -1.05
DSG3-201ENST00000257189 TSNQ15631 228 aaKnown RBP8.49□□□□□ -1.05
DSG3-201ENST00000257189 DDR2Q16832 855 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 ZNF699Q32M78 642 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 E4F1Q66K89 784 aaPredicted RBP8.49□□□□□ -1.05
DSG3-201ENST00000257189 USP38Q8NB14 1042 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 SHCBP1Q8NEM2 672 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 OR6P1Q8NGX9 317 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 MOSPD2Q8NHP6 518 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 WNK4Q96J92 1243 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 C9orf16Q9BUW7 83 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 CPA4Q9UI42 421 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 MROH7Q68CQ1 1323 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 PNMA6FA0A0J9YX94 578 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 UBA6A0AVT1 1052 aaPredicted RBP8.49□□□□□ -1.05
DSG3-201ENST00000257189 POTECB2RU33 542 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 H3BMM5 538 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 H2AFXP16104 143 aaPredicted RBP8.49□□□□□ -1.05
DSG3-201ENST00000257189 HOXB6P17509 224 aaKnown RBP8.49□□□□□ -1.05
DSG3-201ENST00000257189 CCNA2P20248 432 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 TARSP26639 723 aaKnown RBP8.49□□□□□ -1.05
DSG3-201ENST00000257189 GNA15P30679 374 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 NPEPPSP55786 919 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 SCRN3Q0VDG4 424 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 EIF2B5Q13144 721 aaKnown RBP8.49□□□□□ -1.05
DSG3-201ENST00000257189 CDO1Q16878 200 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 SPDYCQ5MJ68 293 aa8.49□□□□□ -1.05
DSG3-201ENST00000257189 CENPLQ8N0S6 344 aaPredicted RBP8.49□□□□□ -1.05
DSG3-201ENST00000257189 EDC3Q96F86 508 aaKnown RBP8.49□□□□□ -1.05
DSG3-201ENST00000257189 NARS2Q96I59 477 aaKnown RBP8.49□□□□□ -1.05
DSG3-201ENST00000257189 SPATA17Q96L03 361 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms