RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 MAGEB2O15479 319 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 MAFGO15525 162 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 RNF8O76064 485 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 TOMM70O94826 608 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 CCNB1P14635 433 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 CYP11B1P15538 503 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 PECAM1P16284 738 aaPredicted RBP4.34□□□□□ -1.71
UBE4A-201ENST00000252108 RPS12P25398 132 aaKnown RBP4.34□□□□□ -1.71
UBE4A-201ENST00000252108 TGFB2P61812 414 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 KRT76Q01546 638 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 SLC34A1Q06495 639 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 OASLQ15646 514 aaKnown RBP4.34□□□□□ -1.71
UBE4A-201ENST00000252108 PDK4Q16654 411 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 LRRC38Q5VT99 294 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 CYP4F22Q6NT55 531 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 DNAJC24Q6P3W2 148 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 CATSPERGQ6ZRH7 1159 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 SLC47A2Q86VL8 602 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 ZC3H18Q86VM9 953 aaKnown RBP4.34□□□□□ -1.71
UBE4A-201ENST00000252108 CCDC60Q8IWA6 550 aaPredicted RBP4.34□□□□□ -1.71
UBE4A-201ENST00000252108 TMEM35BQ8NCS4 154 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 EPS8L3Q8TE67 593 aaKnown RBP4.34□□□□□ -1.71
UBE4A-201ENST00000252108 PPP1R14BQ96C90 147 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 CMTM5Q96DZ9 223 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 FAXDC2Q96IV6 333 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 SEMA4AQ9H3S1 761 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 POLD4Q9HCU8 107 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 ITGB1BP2Q9UKP3 347 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 DRG1Q9Y295 367 aaKnown RBP4.34□□□□□ -1.71
UBE4A-201ENST00000252108 ZBTB12Q9Y330 459 aaPredicted RBP4.34□□□□□ -1.71
UBE4A-201ENST00000252108 SCN1AP35498 2009 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 COPEO14579 308 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 OPHN1O60890 802 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 CNTFP26441 200 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 YWHABP31946 246 aaKnown RBP4.34□□□□□ -1.71
UBE4A-201ENST00000252108 QARSP47897 775 aaKnown RBP4.34□□□□□ -1.71
UBE4A-201ENST00000252108 CDK18Q07002 472 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 HIF1AQ16665 826 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 LONRF1Q17RB8 773 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 ASRGL1Q7L266 308 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 NLRP9Q7RTR0 991 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 SLC16A10Q8TF71 515 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 MAML1Q92585 1016 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 PPP2R3CQ969Q6 453 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 DCPSQ96C86 337 aaKnown RBP4.34□□□□□ -1.71
UBE4A-201ENST00000252108 KLRG1Q96E93 195 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 RILPQ96NA2 401 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 TSSK1BQ9BXA7 367 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 ZNF518BQ9C0D4 1074 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 VRTNQ9H8Y1 702 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 ADAM22Q9P0K1 906 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 F8W8V4 182 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 SGK1O00141 431 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 CASQ2O14958 399 aaPredicted RBP4.34□□□□□ -1.71
UBE4A-201ENST00000252108 TGDSO95455 350 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 RARAP10276 462 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 FGFR1P11362 822 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 PGM1P36871 562 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 NOMO3P69849 1222 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 WDR72Q3MJ13 1102 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 USH1GQ495M9 461 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 TDRD10Q5VZ19 366 aaKnown RBP4.34□□□□□ -1.71
UBE4A-201ENST00000252108 ZNF449Q6P9G9 518 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 AAGABQ6PD74 315 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 SPICE1Q8N0Z3 855 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 GPRC5CQ9NQ84 441 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 TMOD4Q9NZQ9 345 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 EPS15L1Q9UBC2 864 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 NME7Q9Y5B8 376 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 SPDYE16A6NNV3 312 aaPredicted RBP4.34□□□□□ -1.71
UBE4A-201ENST00000252108 E7ESA3 106 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 CHMP2AO43633 222 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 GABBR2O75899 941 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 PROSCO94903 275 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 ASNSP08243 561 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 MYL4P12829 197 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 POLE2P56282 527 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 OGDHQ02218 1023 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 MGAT5Q09328 741 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 RCN2Q14257 317 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 KRT72Q14CN4 511 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 HAUS6Q7Z4H7 955 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 PPIL6Q8IXY8 311 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 GLG1Q92896 1179 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 C18orf8Q96DM3 657 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 KCNK16Q96T55 309 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 BTBD10Q9BSF8 475 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 EFHD1Q9BUP0 239 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 NFKBIZQ9BYH8 718 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 DCLK3Q9C098 648 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 DRC3Q9H069 523 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 MTIF3Q9H2K0 278 aaKnown RBP4.34□□□□□ -1.71
UBE4A-201ENST00000252108 PCDH9Q9HC56 1237 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 LNPEPQ9UIQ6 1025 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 BRCA2P51587 3418 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 DNAH12Q6ZR08 3092 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 SMIM31A0A1B0GVY4 71 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 RBM47A0AV96 593 aaKnown RBP4.34□□□□□ -1.72
UBE4A-201ENST00000252108 STRNO43815 780 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 CFBP00751 764 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms