RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 DDX43Q9NXZ2 648 aaKnown RBP18.92■□□□□ 0.62
KLHDC3-201ENST00000244670 SIGLEC16A6NMB1 481 aa18.91■□□□□ 0.62
KLHDC3-201ENST00000244670 BHMG1C9JSJ3 638 aaPredicted RBP18.91■□□□□ 0.62
KLHDC3-201ENST00000244670 F8W810 466 aa18.91■□□□□ 0.62
KLHDC3-201ENST00000244670 B3GAT3O94766 335 aa18.91■□□□□ 0.62
KLHDC3-201ENST00000244670 TKTP29401 623 aaKnown RBP18.91■□□□□ 0.62
KLHDC3-201ENST00000244670 BRCC3P46736 316 aa18.91■□□□□ 0.62
KLHDC3-201ENST00000244670 ZNF268Q14587 947 aaPredicted RBP18.91■□□□□ 0.62
KLHDC3-201ENST00000244670 FAM102AQ5T9C2 384 aaPredicted RBP18.91■□□□□ 0.62
KLHDC3-201ENST00000244670 FAM183BPQ6ZVS7 135 aa18.91■□□□□ 0.62
KLHDC3-201ENST00000244670 SCLYQ96I15 445 aa18.91■□□□□ 0.62
KLHDC3-201ENST00000244670 PIWIL1Q96J94 861 aaKnown RBP18.91■□□□□ 0.62
KLHDC3-201ENST00000244670 TNIP3Q96KP6 325 aa18.91■□□□□ 0.62
KLHDC3-201ENST00000244670 NAP1L3Q99457 506 aaPredicted RBP18.91■□□□□ 0.62
KLHDC3-201ENST00000244670 SLITRK6Q9H5Y7 841 aa18.91■□□□□ 0.62
KLHDC3-201ENST00000244670 WDR35Q9P2L0 1181 aa18.91■□□□□ 0.62
KLHDC3-201ENST00000244670 H3BQF6 201 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 POLR3GO15318 223 aaPredicted RBP18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 MNX1P50219 401 aaPredicted RBP18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 EPHB4P54760 987 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 TAP1Q03518 808 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 KIAA0319Q5VV43 1072 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 GLB1LQ6UWU2 654 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 MCRS1Q96EZ8 462 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 FTHL17Q9BXU8 183 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 HPCAL4Q9UM19 191 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 NFU1Q9UMS0 254 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 GABRDO14764 452 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 B4GALT3O60512 393 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 EOMESO95936 686 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 PSMA2P25787 234 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 MAN1A1P33908 653 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 CCL23P55773 120 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 GSCP56915 257 aaPredicted RBP18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 TCTN1Q2MV58 587 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 SLC39A5Q6ZMH5 540 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 SND1Q7KZF4 910 aaKnown RBP eCLIP18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 DIS3LQ8TF46 1054 aaKnown RBP18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 SLC35F5Q8WV83 523 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 IFT81Q8WYA0 676 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 DDX27Q96GQ7 796 aaKnown RBP18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 PPP1R12CQ9BZL4 782 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 KLHL11Q9NVR0 708 aa18.9■□□□□ 0.62
KLHDC3-201ENST00000244670 TSC2P49815 1807 aa18.89■□□□□ 0.62
KLHDC3-201ENST00000244670 TCRBV7S2A1N4TA0A589 114 aa18.89■□□□□ 0.61
KLHDC3-201ENST00000244670 CLDN5O00501 218 aa18.89■□□□□ 0.61
KLHDC3-201ENST00000244670 PITPNM1O00562 1244 aa18.89■□□□□ 0.61
KLHDC3-201ENST00000244670 TTI1O43156 1089 aa18.89■□□□□ 0.61
KLHDC3-201ENST00000244670 GRAP2O75791 330 aa18.89■□□□□ 0.61
KLHDC3-201ENST00000244670 ITGB1P05556 798 aa18.89■□□□□ 0.61
KLHDC3-201ENST00000244670 PTPN1P18031 435 aaKnown RBP18.89■□□□□ 0.61
KLHDC3-201ENST00000244670 FAM189BP81408 668 aa18.89■□□□□ 0.61
KLHDC3-201ENST00000244670 BST2Q10589 180 aaKnown RBP18.89■□□□□ 0.61
KLHDC3-201ENST00000244670 MDH1BQ5I0G3 518 aa18.89■□□□□ 0.61
KLHDC3-201ENST00000244670 CD300LGQ6UXG3 332 aa18.89■□□□□ 0.61
KLHDC3-201ENST00000244670 ZNF280BQ86YH2 543 aa18.89■□□□□ 0.61
KLHDC3-201ENST00000244670 RHOT1Q8IXI2 618 aa18.89■□□□□ 0.61
KLHDC3-201ENST00000244670 ANKRD52Q8NB46 1076 aa18.89■□□□□ 0.61
KLHDC3-201ENST00000244670 DNAI2Q9GZS0 605 aa18.89■□□□□ 0.61
KLHDC3-201ENST00000244670 VIPAS39Q9H9C1 493 aa18.89■□□□□ 0.61
KLHDC3-201ENST00000244670 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.89■□□□□ 0.61
KLHDC3-201ENST00000244670 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.89■□□□□ 0.61
KLHDC3-201ENST00000244670 TANC1Q9C0D5 1861 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 PSTPIP1O43586 416 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 GABBR2O75899 941 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 DDHD2O94830 711 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 SETSIPP0DME0 302 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 AARSP49588 968 aaKnown RBP eCLIP18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 BCAT1P54687 386 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 CLUL1Q15846 466 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 TRIM60Q495X7 471 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 ATP13A4Q4VNC1 1196 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 PLEKHG4Q58EX7 1191 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 EMBQ6PCB8 327 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 TMEM86AQ8N2M4 240 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 PRELID2Q8N945 189 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 SLC4A5Q9BY07 1137 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 ACBD3Q9H3P7 528 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 CRTAC1Q9NQ79 661 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 GOLGA6L10A0A0M3HER8 536 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 ENPP3O14638 875 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 INPPL1O15357 1258 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 FAM153BP0C7A2 387 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 ECHS1P30084 290 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 PIGHQ14442 188 aaPredicted RBP18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 FAM153CQ494X1 144 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 NOMO2Q5JPE7 1267 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 SLC13A5Q86YT5 568 aaPredicted RBP18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 CCDC50Q8IVM0 306 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 SCUBE3Q8IX30 993 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 FUKQ8N0W3 1084 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 CAVIN3Q969G5 261 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 SYT15Q9BQS2 421 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 MED10Q9BTT4 135 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 B3GNT5Q9BYG0 378 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 MIS12Q9H081 205 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 HIPK3Q9H422 1215 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 FAM153AQ9UHL3 310 aa18.88■□□□□ 0.61
KLHDC3-201ENST00000244670 ODC1P11926 461 aa18.87■□□□□ 0.61
KLHDC3-201ENST00000244670 LHX1P48742 406 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms