RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 A0A0B4J269 797 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 SPAARA0A1B0GVQ0 90 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 H0YCG3 227 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 SCAMP3O14828 347 aaKnown RBP14.82□□□□□ -0.04
DDX39A-201ENST00000242776 CSH1P0DML2 217 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 CSH2P0DML3 217 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 CYP2F1P24903 491 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 ATP2C1P98194 919 aaPredicted RBP14.82□□□□□ -0.04
DDX39A-201ENST00000242776 TSPY1Q01534 308 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 RING1Q06587 406 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 ACAP1Q15027 740 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 ZNF77Q15935 545 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 ARL6IP4Q66PJ3 421 aaKnown RBP14.82□□□□□ -0.04
DDX39A-201ENST00000242776 ADALQ6DHV7 355 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 SCN4BQ8IWT1 228 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 EFCAB13Q8IY85 973 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 FRMD1Q8N878 549 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 OSCP1Q8WVF1 389 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 ATP2A3Q93084 1043 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 FAM84AQ96KN4 292 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 ZDHHC4Q9NPG8 344 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 LHX6Q9UPM6 363 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 TNRC6BQ9UPQ9 1833 aaKnown RBP14.82□□□□□ -0.04
DDX39A-201ENST00000242776 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 TRAV19A0A0A6YYK7 116 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 C2orf78A6NCI8 922 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 KPNA7A9QM74 516 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 SPTLC2O15270 562 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 HCRTO43612 131 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 KRT18P05783 430 aaKnown RBP14.82□□□□□ -0.04
DDX39A-201ENST00000242776 ADRB2P07550 413 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 CEACAM1P13688 526 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 PRPHP41219 470 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 FAM160A1Q05DH4 1040 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 SLC39A14Q15043 492 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 EML3Q32P44 896 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 TRIM61Q5EBN2 209 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 SFTPA1Q8IWL2 248 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 CD302Q8IX05 232 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 TMEFF1Q8IYR6 380 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 LINC00301Q8NCQ3 95 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 MDGA1Q8NFP4 955 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 SH3RF2Q8TEC5 729 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 USP33Q8TEY7 942 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 KLK13Q9UKR3 277 aa14.82□□□□□ -0.04
DDX39A-201ENST00000242776 GOLGA6L22H0YM25 854 aa14.81□□□□□ -0.04
DDX39A-201ENST00000242776 MAP3K13O43283 966 aa14.81□□□□□ -0.04
DDX39A-201ENST00000242776 TRAK2O60296 914 aa14.81□□□□□ -0.04
DDX39A-201ENST00000242776 PPP6R2O75170 966 aa14.81□□□□□ -0.04
DDX39A-201ENST00000242776 USP17L7P0C7H9 530 aa14.81□□□□□ -0.04
DDX39A-201ENST00000242776 CSRP1P21291 193 aaKnown RBP14.81□□□□□ -0.04
DDX39A-201ENST00000242776 ZNF268Q14587 947 aaPredicted RBP14.81□□□□□ -0.04
DDX39A-201ENST00000242776 SV2CQ496J9 727 aa14.81□□□□□ -0.04
DDX39A-201ENST00000242776 HYIQ5T013 277 aa14.81□□□□□ -0.04
DDX39A-201ENST00000242776 SCARA3Q6AZY7 606 aa14.81□□□□□ -0.04
DDX39A-201ENST00000242776 CLEC17AQ6ZS10 378 aa14.81□□□□□ -0.04
DDX39A-201ENST00000242776 DEFB119Q8N690 84 aa14.81□□□□□ -0.04
DDX39A-201ENST00000242776 TSPAN18Q96SJ8 248 aa14.81□□□□□ -0.04
DDX39A-201ENST00000242776 DDX43Q9NXZ2 648 aaKnown RBP14.81□□□□□ -0.04
DDX39A-201ENST00000242776 ZMYM5Q9UJ78 669 aa14.81□□□□□ -0.04
DDX39A-201ENST00000242776 CACNA1EQ15878 2313 aa14.8□□□□□ -0.04
DDX39A-201ENST00000242776 K7EQS6 105 aa14.8□□□□□ -0.04
DDX39A-201ENST00000242776 PIGRP01833 764 aa14.8□□□□□ -0.04
DDX39A-201ENST00000242776 HNRNPLP14866 589 aaKnown RBP eCLIP14.8□□□□□ -0.04
DDX39A-201ENST00000242776 SMARCB1Q12824 385 aa14.8□□□□□ -0.04
DDX39A-201ENST00000242776 USP4Q13107 963 aa14.8□□□□□ -0.04
DDX39A-201ENST00000242776 NR1H3Q13133 447 aa14.8□□□□□ -0.04
DDX39A-201ENST00000242776 MCM6Q14566 821 aa14.8□□□□□ -0.04
DDX39A-201ENST00000242776 TMEM119Q4V9L6 283 aa14.8□□□□□ -0.04
DDX39A-201ENST00000242776 PDCL2Q8N4E4 241 aa14.8□□□□□ -0.04
DDX39A-201ENST00000242776 LRRC15Q8TF66 581 aa14.8□□□□□ -0.04
DDX39A-201ENST00000242776 NOC3LQ8WTT2 800 aaKnown RBP14.8□□□□□ -0.04
DDX39A-201ENST00000242776 LEO1Q8WVC0 666 aaPredicted RBP14.8□□□□□ -0.04
DDX39A-201ENST00000242776 GTPBP2Q9BX10 602 aaKnown RBP14.8□□□□□ -0.04
DDX39A-201ENST00000242776 PARVGQ9HBI0 331 aa14.8□□□□□ -0.04
DDX39A-201ENST00000242776 BCCIPQ9P287 314 aaKnown RBP eCLIP14.8□□□□□ -0.04
DDX39A-201ENST00000242776 UXTQ9UBK9 157 aaPredicted RBP14.8□□□□□ -0.04
DDX39A-201ENST00000242776 GTF3C4Q9UKN8 822 aa14.8□□□□□ -0.04
DDX39A-201ENST00000242776 AGO2Q9UKV8 859 aaKnown RBP14.8□□□□□ -0.04
DDX39A-201ENST00000242776 DERAQ9Y315 318 aa14.8□□□□□ -0.04
DDX39A-201ENST00000242776 PCNX2A6NKB5 2137 aa14.8□□□□□ -0.04
DDX39A-201ENST00000242776 PKD1L2Q7Z442 2459 aa14.79□□□□□ -0.04
DDX39A-201ENST00000242776 TMEM8BA6NDV4 472 aa14.79□□□□□ -0.04
DDX39A-201ENST00000242776 PAX3P23760 479 aa14.79□□□□□ -0.04
DDX39A-201ENST00000242776 POLR2BP30876 1174 aaKnown RBP14.79□□□□□ -0.04
DDX39A-201ENST00000242776 TIE1P35590 1138 aa14.79□□□□□ -0.04
DDX39A-201ENST00000242776 OPRD1P41143 372 aa14.79□□□□□ -0.04
DDX39A-201ENST00000242776 PTGER3P43115 390 aa14.79□□□□□ -0.04
DDX39A-201ENST00000242776 RPL10AP62906 217 aaKnown RBP14.79□□□□□ -0.04
DDX39A-201ENST00000242776 SIM1P81133 766 aaPredicted RBP14.79□□□□□ -0.04
DDX39A-201ENST00000242776 TFAMQ00059 246 aaKnown RBP14.79□□□□□ -0.04
DDX39A-201ENST00000242776 KCNB1Q14721 858 aa14.79□□□□□ -0.04
DDX39A-201ENST00000242776 LRSAM1Q6UWE0 723 aa14.79□□□□□ -0.04
DDX39A-201ENST00000242776 TMEM92Q6UXU6 159 aa14.79□□□□□ -0.04
DDX39A-201ENST00000242776 PGBD3Q8N328 593 aa14.79□□□□□ -0.04
DDX39A-201ENST00000242776 ALLCQ8N6M5 410 aa14.79□□□□□ -0.04
DDX39A-201ENST00000242776 KRI1Q8N9T8 703 aaKnown RBP14.79□□□□□ -0.04
DDX39A-201ENST00000242776 ERLEC1Q96DZ1 483 aa14.79□□□□□ -0.04
DDX39A-201ENST00000242776 NUSAP1Q9BXS6 441 aaKnown RBP14.79□□□□□ -0.04
DDX39A-201ENST00000242776 ASB7Q9H672 318 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms