RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 UBA3Q8TBC4 463 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 HDAC7Q8WUI4 952 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 DDX1Q92499 740 aaKnown RBP10.78□□□□□ -0.68
HMGCL-201ENST00000235958 KCNK16Q96T55 309 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 DUSP16Q9BY84 665 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 TMEM30AQ9NV96 361 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 HSFX1Q9UBD0 423 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 FBXW11Q9UKB1 542 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 TSPAN16Q9UKR8 245 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 PTPRDP23468 1912 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 NCK2O43639 380 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 AP1G2O75843 785 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 MICAL2O94851 1124 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 FOSL2P15408 326 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 HNRNPH3P31942 346 aaKnown RBP10.77□□□□□ -0.69
HMGCL-201ENST00000235958 ALDH1A3P47895 512 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 MAP3K7CLP57077 242 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 RPL10AP62906 217 aaKnown RBP10.77□□□□□ -0.69
HMGCL-201ENST00000235958 DDR2Q16832 855 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 CTC1Q2NKJ3 1217 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 SDHAF4Q5VUM1 108 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 TAF3Q5VWG9 929 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 DENND1BQ6P3S1 775 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 WDR59Q6PJI9 974 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 CCDC149Q6ZUS6 474 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 FAM35AQ86V20 835 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 TTC30AQ86WT1 665 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 FMNL3Q8IVF7 1028 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 SCN4BQ8IWT1 228 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 C12orf76Q8N812 135 aaPredicted RBP10.77□□□□□ -0.69
HMGCL-201ENST00000235958 TC2NQ8N9U0 490 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 SLC7A14Q8TBB6 771 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 EPS8L1Q8TE68 723 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 SLC20A1Q8WUM9 679 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 SMARCD1Q96GM5 515 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 DNAJC7Q99615 494 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 SEPT5Q99719 369 aaPredicted RBP10.77□□□□□ -0.69
HMGCL-201ENST00000235958 SMOQ99835 787 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 LHX5Q9H2C1 402 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 CSNK1G1Q9HCP0 422 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 MAN1C1Q9NR34 630 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 IMPACTQ9P2X3 320 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 HESX1Q9UBX0 185 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 DPP7Q9UHL4 492 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 NOCTQ9UK39 431 aaKnown RBP10.77□□□□□ -0.69
HMGCL-201ENST00000235958 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.77□□□□□ -0.69
HMGCL-201ENST00000235958 ATP8B3O60423 1300 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 REV3LO60673 3130 aa10.77□□□□□ -0.69
HMGCL-201ENST00000235958 CCDC195A0A1B0GUA6 201 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 F8VP50 259 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 MFAP3LO75121 409 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 RFPL2O75678 378 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 ZMYND10O75800 440 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 GLP2RO95838 553 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 SERPING1P05155 500 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 C8AP07357 584 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 MMEP08473 750 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 FAM200BP0CF97 657 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 NPR3P17342 541 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 TNFAIP3P21580 790 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 LTBRP36941 435 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 PRKCIP41743 596 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 GPD2P43304 727 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 GPR15P49685 360 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 PDE6CP51160 858 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 CDR2Q01850 454 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 DLX2Q07687 328 aaPredicted RBP10.76□□□□□ -0.69
HMGCL-201ENST00000235958 PDE4CQ08493 712 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 KLHL30Q0D2K2 578 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 TWF1Q12792 350 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 ARID5BQ14865 1188 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 GOLGA7BQ2TAP0 167 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 PKDCCQ504Y2 493 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 PPM1LQ5SGD2 360 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 LIN9Q5TKA1 542 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 HGSNATQ68CP4 663 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 ELMSAN1Q6PJG2 1045 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 EP400NLQ6ZTU2 488 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 CLEC20AQ6ZU45 233 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 ZNF677Q86XU0 584 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 CNGA4Q8IV77 575 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 WDTC1Q8N5D0 677 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 ZMIZ2Q8NF64 920 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 GPR152Q8TDT2 470 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 GIPC2Q8TF65 315 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 SLC35F5Q8WV83 523 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 PPM1EQ8WY54 764 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 CASP10Q92851 521 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 C8orf48Q96LL4 319 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 AGPAT1Q99943 283 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 UBXN6Q9BZV1 441 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 PDCL3Q9H2J4 239 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 HAUS4Q9H6D7 363 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 KRT82Q9NSB4 513 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 ZNHIT6Q9NWK9 470 aaKnown RBP10.76□□□□□ -0.69
HMGCL-201ENST00000235958 PCDHGC3Q9UN70 934 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 INSL5Q9Y5Q6 135 aa10.76□□□□□ -0.69
HMGCL-201ENST00000235958 BZW2Q9Y6E2 419 aaKnown RBP10.76□□□□□ -0.69
HMGCL-201ENST00000235958 HHLA1C9JL84 531 aa10.75□□□□□ -0.69
HMGCL-201ENST00000235958 TULP2O00295 520 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms