RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 SKA1Q96BD8 255 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 GPRASP2Q96D09 838 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 VPS37BQ9H9H4 285 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 ACP6Q9NPH0 428 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 ANKEF1Q9NU02 776 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 DDX43Q9NXZ2 648 aaKnown RBP16.71■□□□□ 0.27
SF3A2-201ENST00000221494 ANGPTL2Q9UKU9 493 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 TBX20Q9UMR3 447 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 EFR3BQ9Y2G0 817 aa16.71■□□□□ 0.27
SF3A2-201ENST00000221494 CCL15-CCL14A0A0B4J2E2 113 aa16.7■□□□□ 0.26
SF3A2-201ENST00000221494 DCAF8L1A6NGE4 600 aa16.7■□□□□ 0.26
SF3A2-201ENST00000221494 BTBD19C9JJ37 291 aa16.7■□□□□ 0.26
SF3A2-201ENST00000221494 DDX39AO00148 427 aaKnown RBP16.7■□□□□ 0.26
SF3A2-201ENST00000221494 FAM155BO75949 473 aa16.7■□□□□ 0.26
SF3A2-201ENST00000221494 PSMG1O95456 288 aa16.7■□□□□ 0.26
SF3A2-201ENST00000221494 GARTP22102 1010 aa16.7■□□□□ 0.26
SF3A2-201ENST00000221494 RAP1GDS1P52306 607 aa16.7■□□□□ 0.26
SF3A2-201ENST00000221494 VCPP55072 806 aaKnown RBP16.7■□□□□ 0.26
SF3A2-201ENST00000221494 CDK16Q00536 496 aa16.7■□□□□ 0.26
SF3A2-201ENST00000221494 CCL15Q16663 113 aa16.7■□□□□ 0.26
SF3A2-201ENST00000221494 KHDC1Q4VXA5 237 aaKnown RBP16.7■□□□□ 0.26
SF3A2-201ENST00000221494 C15orf39Q6ZRI6 1047 aa16.7■□□□□ 0.26
SF3A2-201ENST00000221494 ZNF276Q8N554 614 aa16.7■□□□□ 0.26
SF3A2-201ENST00000221494 HEMGNQ9BXL5 484 aa16.7■□□□□ 0.26
SF3A2-201ENST00000221494 ACSS3Q9H6R3 686 aa16.7■□□□□ 0.26
SF3A2-201ENST00000221494 NPHS2Q9NP85 383 aa16.7■□□□□ 0.26
SF3A2-201ENST00000221494 SLC45A1Q9Y2W3 748 aa16.7■□□□□ 0.26
SF3A2-201ENST00000221494 PDHXO00330 501 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 KLF11O14901 512 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 GYG2O15488 501 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 MAGEC1O60732 1142 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 RTN3O95197 1032 aaPredicted RBP16.69■□□□□ 0.26
SF3A2-201ENST00000221494 PDHA1P08559 390 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 ARSEP51690 589 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 TAS2R40P59535 323 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 CLDN10P78369 228 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 ADCY1Q08828 1119 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 FSTL1Q12841 308 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 CBLBQ13191 982 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 BIRC2Q13490 618 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 RCN1Q15293 331 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 OASLQ15646 514 aaKnown RBP16.69■□□□□ 0.26
SF3A2-201ENST00000221494 THEMIS2Q5TEJ8 643 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 CCDC62Q6P9F0 684 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 SV2AQ7L0J3 742 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 C4orf33Q8N1A6 199 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 MCUR1Q96AQ8 359 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 DTNBP1Q96EV8 351 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 PARVAQ9NVD7 372 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 DDX56Q9NY93 547 aaKnown RBP16.69■□□□□ 0.26
SF3A2-201ENST00000221494 ZNF148Q9UQR1 794 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 E7ESA3 106 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 MAP3K7O43318 606 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 STAM2O75886 525 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 DHRS4L1P0CG22 281 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 KRT4P19013 534 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 NOMO3P69849 1222 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 MAMLD1Q13495 774 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 HIF1AQ16665 826 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 NLRX1Q86UT6 975 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 BANPQ8N9N5 519 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 GATA6Q92908 595 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 SLITRK1Q96PX8 696 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 NTPCRQ9BSD7 190 aaKnown RBP16.69■□□□□ 0.26
SF3A2-201ENST00000221494 MAK16Q9BXY0 300 aaKnown RBP16.69■□□□□ 0.26
SF3A2-201ENST00000221494 MANSC1Q9H8J5 431 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 IL1RAPL1Q9NZN1 696 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 DLGAP2Q9P1A6 1054 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 KANSL3Q9P2N6 904 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 RABGEF1Q9UJ41 708 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 C2CD2Q9Y426 696 aa16.69■□□□□ 0.26
SF3A2-201ENST00000221494 FAM170AA1A519 330 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 SOWAHBA6NEL2 793 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 H0Y3Z8 333 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 ARFIP2P53365 341 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 ARL4CP56559 192 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 TAP1Q03518 808 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 GPS1Q13098 491 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 MAPK6Q16659 721 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 PRUNE1Q86TP1 453 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 TMEM161BQ8NDZ6 487 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 FEZF2Q8TBJ5 459 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 MZB1Q8WU39 189 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 SCG3Q8WXD2 468 aaKnown RBP16.68■□□□□ 0.26
SF3A2-201ENST00000221494 APBB2Q92870 758 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 SENP7Q9BQF6 1050 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 TSSK1BQ9BXA7 367 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 CNTN6Q9UQ52 1028 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 FARP1Q9Y4F1 1045 aaPredicted RBP16.68■□□□□ 0.26
SF3A2-201ENST00000221494 SLC16A4O15374 487 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 CCNE2O96020 404 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 YWHABP31946 246 aaKnown RBP16.68■□□□□ 0.26
SF3A2-201ENST00000221494 PEX3P56589 373 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 RCN2Q14257 317 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 TBCCQ15814 346 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 STXBP2Q15833 593 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 GNPTABQ3T906 1256 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 ACSBG2Q5FVE4 666 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 WDR44Q5JSH3 913 aa16.68■□□□□ 0.26
SF3A2-201ENST00000221494 DNAJC14Q6Y2X3 702 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms