RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 PLD1Q13393 1074 aa25.07■■□□□ 1.6
HOMER3-201ENST00000221222 PTPN21Q16825 1174 aa25.07■■□□□ 1.6
HOMER3-201ENST00000221222 FAM35AQ86V20 835 aa25.07■■□□□ 1.6
HOMER3-201ENST00000221222 SMRP1Q8NCR6 262 aa25.07■■□□□ 1.6
HOMER3-201ENST00000221222 ZNF707Q96C28 371 aaPredicted RBP25.07■■□□□ 1.6
HOMER3-201ENST00000221222 CD207Q9UJ71 328 aa25.07■■□□□ 1.6
HOMER3-201ENST00000221222 FAM86C2PA6NEL3 165 aa25.06■■□□□ 1.6
HOMER3-201ENST00000221222 F8VZ95 297 aa25.06■■□□□ 1.6
HOMER3-201ENST00000221222 FOXN3O00409 490 aaPredicted RBP25.06■■□□□ 1.6
HOMER3-201ENST00000221222 CLDN5O00501 218 aa25.06■■□□□ 1.6
HOMER3-201ENST00000221222 LRG1P02750 347 aa25.06■■□□□ 1.6
HOMER3-201ENST00000221222 ALDH1A3P47895 512 aa25.06■■□□□ 1.6
HOMER3-201ENST00000221222 JAM2P57087 298 aa25.06■■□□□ 1.6
HOMER3-201ENST00000221222 TWF1Q12792 350 aa25.06■■□□□ 1.6
HOMER3-201ENST00000221222 SGO2Q562F6 1265 aa25.06■■□□□ 1.6
HOMER3-201ENST00000221222 RARS2Q5T160 578 aaKnown RBP25.06■■□□□ 1.6
HOMER3-201ENST00000221222 PPP1R26Q5T8A7 1209 aaPredicted RBP25.06■■□□□ 1.6
HOMER3-201ENST00000221222 FAM71AQ8IYT1 594 aa25.06■■□□□ 1.6
HOMER3-201ENST00000221222 GJD3Q8N144 294 aa25.06■■□□□ 1.6
HOMER3-201ENST00000221222 SMARCD1Q96GM5 515 aa25.06■■□□□ 1.6
HOMER3-201ENST00000221222 MED10Q9BTT4 135 aa25.06■■□□□ 1.6
HOMER3-201ENST00000221222 ADAM7Q9H2U9 754 aa25.06■■□□□ 1.6
HOMER3-201ENST00000221222 MYH10P35580 1976 aa25.06■■□□□ 1.6
HOMER3-201ENST00000221222 XYLBO75191 536 aa25.05■■□□□ 1.6
HOMER3-201ENST00000221222 SOAT2O75908 522 aa25.05■■□□□ 1.6
HOMER3-201ENST00000221222 ATF6P18850 670 aa25.05■■□□□ 1.6
HOMER3-201ENST00000221222 RPL10AP62906 217 aaKnown RBP25.05■■□□□ 1.6
HOMER3-201ENST00000221222 TMC5Q6UXY8 1006 aa25.05■■□□□ 1.6
HOMER3-201ENST00000221222 GPR149Q86SP6 731 aa25.05■■□□□ 1.6
HOMER3-201ENST00000221222 CEP295NLQ96MC4 621 aa25.05■■□□□ 1.6
HOMER3-201ENST00000221222 NLRC4Q9NPP4 1024 aa25.05■■□□□ 1.6
HOMER3-201ENST00000221222 CCL16O15467 120 aa25.05■■□□□ 1.6
HOMER3-201ENST00000221222 CD19P15391 556 aa25.05■■□□□ 1.6
HOMER3-201ENST00000221222 USP8P40818 1118 aa25.05■■□□□ 1.6
HOMER3-201ENST00000221222 EPHB3P54753 998 aa25.05■■□□□ 1.6
HOMER3-201ENST00000221222 FIGNQ5HY92 759 aa25.05■■□□□ 1.6
HOMER3-201ENST00000221222 TFAP2BQ92481 460 aa25.05■■□□□ 1.6
HOMER3-201ENST00000221222 C8orf48Q96LL4 319 aa25.05■■□□□ 1.6
HOMER3-201ENST00000221222 TTYH3Q9C0H2 523 aa25.05■■□□□ 1.6
HOMER3-201ENST00000221222 KRT82Q9NSB4 513 aa25.05■■□□□ 1.6
HOMER3-201ENST00000221222 TMEM30AQ9NV96 361 aa25.05■■□□□ 1.6
HOMER3-201ENST00000221222 ASB3Q9Y575 518 aa25.05■■□□□ 1.6
HOMER3-201ENST00000221222 PATJQ8NI35 1801 aa25.04■■□□□ 1.6
HOMER3-201ENST00000221222 GREB1Q4ZG55 1949 aa25.04■■□□□ 1.6
HOMER3-201ENST00000221222 O00370 1275 aa25.04■■□□□ 1.6
HOMER3-201ENST00000221222 TRIM66O15016 1216 aa25.04■■□□□ 1.6
HOMER3-201ENST00000221222 AP5Z1O43299 807 aa25.04■■□□□ 1.6
HOMER3-201ENST00000221222 PNMA6AP0CW24 399 aaPredicted RBP25.04■■□□□ 1.6
HOMER3-201ENST00000221222 ADORA2BP29275 332 aa25.04■■□□□ 1.6
HOMER3-201ENST00000221222 CLCN1P35523 988 aa25.04■■□□□ 1.6
HOMER3-201ENST00000221222 CACNA2D1P54289 1103 aa25.04■■□□□ 1.6
HOMER3-201ENST00000221222 STILQ15468 1287 aa25.04■■□□□ 1.6
HOMER3-201ENST00000221222 PUS10Q3MIT2 529 aaKnown RBP25.04■■□□□ 1.6
HOMER3-201ENST00000221222 CES5AQ6NT32 575 aa25.04■■□□□ 1.6
HOMER3-201ENST00000221222 FEZF2Q8TBJ5 459 aa25.04■■□□□ 1.6
HOMER3-201ENST00000221222 SMG7Q92540 1137 aaKnown RBP25.04■■□□□ 1.6
HOMER3-201ENST00000221222 ZSWIM1Q9BR11 485 aa25.04■■□□□ 1.6
HOMER3-201ENST00000221222 LRFN3Q9BTN0 628 aa25.04■■□□□ 1.6
HOMER3-201ENST00000221222 APOL5Q9BWW9 433 aa25.04■■□□□ 1.6
HOMER3-201ENST00000221222 EDEM3Q9BZQ6 932 aa25.04■■□□□ 1.6
HOMER3-201ENST00000221222 CSNK1G1Q9HCP0 422 aa25.04■■□□□ 1.6
HOMER3-201ENST00000221222 ITIH6Q6UXX5 1313 aa25.03■■□□□ 1.6
HOMER3-201ENST00000221222 CYP26A1O43174 497 aa25.03■■□□□ 1.6
HOMER3-201ENST00000221222 AP1G2O75843 785 aa25.03■■□□□ 1.6
HOMER3-201ENST00000221222 FAM200BP0CF97 657 aa25.03■■□□□ 1.6
HOMER3-201ENST00000221222 GRIK1P39086 918 aa25.03■■□□□ 1.6
HOMER3-201ENST00000221222 GPR15P49685 360 aa25.03■■□□□ 1.6
HOMER3-201ENST00000221222 SMAD4Q13485 552 aaKnown RBP25.03■■□□□ 1.6
HOMER3-201ENST00000221222 CNGA2Q16280 664 aa25.03■■□□□ 1.6
HOMER3-201ENST00000221222 DDR2Q16832 855 aa25.03■■□□□ 1.6
HOMER3-201ENST00000221222 SCN4BQ8IWT1 228 aa25.03■■□□□ 1.6
HOMER3-201ENST00000221222 IQCDQ96DY2 449 aa25.03■■□□□ 1.6
HOMER3-201ENST00000221222 SPATA17Q96L03 361 aa25.03■■□□□ 1.6
HOMER3-201ENST00000221222 SPAG5Q96R06 1193 aa25.03■■□□□ 1.6
HOMER3-201ENST00000221222 NUP58Q9BVL2 599 aa25.03■■□□□ 1.6
HOMER3-201ENST00000221222 DMAP1Q9NPF5 467 aaPredicted RBP25.03■■□□□ 1.6
HOMER3-201ENST00000221222 F8VP50 259 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 BRD2P25440 801 aaKnown RBP25.02■■□□□ 1.6
HOMER3-201ENST00000221222 GNA15P30679 374 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 SOX5P35711 763 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 BPIFB4P59827 614 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 PLCB2Q00722 1185 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 PTK2Q05397 1052 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 VEPH1Q14D04 833 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 TMEM31Q5JXX7 168 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 LCLAT1Q6UWP7 414 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 CACNA2D4Q7Z3S7 1137 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 ELMOD1Q8N336 334 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 ANKRD52Q8NB46 1076 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 SUSD6Q92537 303 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 BAP1Q92560 729 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 PSMG2Q969U7 264 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 SMOQ99835 787 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 DUSP16Q9BY84 665 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 TSPAN16Q9UKR8 245 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 MYO6Q9UM54 1294 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.02■■□□□ 1.6
HOMER3-201ENST00000221222 DOCK6Q96HP0 2047 aa25.02■■□□□ 1.6
HOMER3-201ENST00000221222 DENND4AQ7Z401 1863 aa25.01■■□□□ 1.59
HOMER3-201ENST00000221222 NOTCH4Q99466 2003 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms