RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 AGBL3Q8NEM8 1001 aa23.2■■□□□ 1.3
HTATSF1-201ENST00000218364 TSSK1BQ9BXA7 367 aa23.2■■□□□ 1.3
HTATSF1-201ENST00000218364 C10orf88Q9H8K7 445 aa23.2■■□□□ 1.3
HTATSF1-201ENST00000218364 KCNK13Q9HB14 408 aa23.2■■□□□ 1.3
HTATSF1-201ENST00000218364 ARL8BQ9NVJ2 186 aa23.2■■□□□ 1.3
HTATSF1-201ENST00000218364 STRIP2Q9ULQ0 834 aa23.2■■□□□ 1.3
HTATSF1-201ENST00000218364 MTO1Q9Y2Z2 717 aaKnown RBP23.2■■□□□ 1.3
HTATSF1-201ENST00000218364 MAFBQ9Y5Q3 323 aaPredicted RBP23.2■■□□□ 1.3
HTATSF1-201ENST00000218364 COL4A5P29400 1685 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 LINGO3P0C6S8 592 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 ETV4P43268 484 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 CCNHP51946 323 aaPredicted RBP23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 DYNLT1P63172 113 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 IRX1P78414 480 aaPredicted RBP23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 TRIM68Q6AZZ1 485 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 PDIK1LQ8N165 341 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 RSAD2Q8WXG1 361 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 SKA1Q96BD8 255 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 NSL1Q96IY1 281 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 NIF3L1Q9GZT8 377 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 TCRBV7S3A2A0A539 114 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 KDELR1P24390 212 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 PSMC4P43686 418 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 NEK3P51956 506 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 MTMR2Q13614 643 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 KHDC1Q4VXA5 237 aaKnown RBP23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 CYP4A22Q5TCH4 519 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 RFWD3Q6PCD5 774 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 ARMC2Q8NEN0 867 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 FNIP1Q8TF40 1166 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 TFAP2BQ92481 460 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 CYTH2Q99418 400 aa23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 C12orf65Q9H3J6 166 aaKnown RBP23.19■■□□□ 1.3
HTATSF1-201ENST00000218364 SIGLEC16A6NMB1 481 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 H0Y3Z8 333 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 GOLGA8RI6L899 631 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 WNT10BO00744 389 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 GSC2O15499 205 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 LRCH4O75427 683 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 STAM2O75886 525 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 ATG7O95352 703 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 PSMA2P25787 234 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 IL1R2P27930 398 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 RFC1P35251 1148 aaPredicted RBP23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 ARFIP2P53365 341 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 MRPS35P82673 323 aaKnown RBP23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 SLC18A2Q05940 514 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 PRKD1Q15139 912 aaPredicted RBP23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 TSNAXIP1Q2TAA8 658 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 SEZ6Q53EL9 994 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 SH2D5Q6ZV89 423 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 LRRC6Q86X45 466 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 REPS2Q8NFH8 660 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 DNAJC9Q8WXX5 260 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 SLC24A3Q9HC58 644 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 STOML1Q9UBI4 398 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 KIAA1217Q5T5P2 1943 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 PIAS1O75925 651 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 MT-ND3P03897 115 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 OATP04181 439 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 PCK1P35558 622 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 MYL6P60660 151 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 CDK16Q00536 496 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 KRT72Q14CN4 511 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 KLF6Q99612 283 aaPredicted RBP23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 ZWILCHQ9H900 591 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 XPO7Q9UIA9 1087 aaKnown RBP23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 FER1L6Q2WGJ9 1857 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 A0A0G2JND7 137 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 IQANK1A0A1B0GTG1 560 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 PPP1R12AO14974 1030 aaPredicted RBP23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 HADHQ16836 314 aaKnown RBP23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 BBS9Q3SYG4 887 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 UNC45BQ8IWX7 931 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 APOPT1Q96IL0 206 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 TEPSINQ96N21 525 aa23.18■■□□□ 1.3
HTATSF1-201ENST00000218364 FAM189A1O60320 539 aa23.17■■□□□ 1.3
HTATSF1-201ENST00000218364 LPXNO60711 386 aa23.17■■□□□ 1.3
HTATSF1-201ENST00000218364 DSTYKQ6XUX3 929 aa23.17■■□□□ 1.3
HTATSF1-201ENST00000218364 CFAP69A5D8W1 941 aa23.17■■□□□ 1.3
HTATSF1-201ENST00000218364 DLDP09622 509 aaKnown RBP23.17■■□□□ 1.3
HTATSF1-201ENST00000218364 SGSM1Q2NKQ1 1148 aa23.17■■□□□ 1.3
HTATSF1-201ENST00000218364 ZNF394Q53GI3 561 aa23.17■■□□□ 1.3
HTATSF1-201ENST00000218364 FAM91A1Q658Y4 838 aa23.17■■□□□ 1.3
HTATSF1-201ENST00000218364 ZNF333Q96JL9 665 aa23.17■■□□□ 1.3
HTATSF1-201ENST00000218364 NIFKQ9BYG3 293 aaKnown RBP23.17■■□□□ 1.3
HTATSF1-201ENST00000218364 ZNF302Q9NR11 478 aa23.17■■□□□ 1.3
HTATSF1-201ENST00000218364 CNTN3Q9P232 1028 aa23.17■■□□□ 1.3
HTATSF1-201ENST00000218364 KRT3P12035 628 aa23.16■■□□□ 1.3
HTATSF1-201ENST00000218364 CBLBQ13191 982 aa23.16■■□□□ 1.3
HTATSF1-201ENST00000218364 SMTNL2Q2TAL5 461 aa23.16■■□□□ 1.3
HTATSF1-201ENST00000218364 GNPTABQ3T906 1256 aa23.16■■□□□ 1.3
HTATSF1-201ENST00000218364 ZPBP2Q6X784 338 aa23.16■■□□□ 1.3
HTATSF1-201ENST00000218364 KIAA0319LQ8IZA0 1049 aa23.16■■□□□ 1.3
HTATSF1-201ENST00000218364 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.16■■□□□ 1.3
HTATSF1-201ENST00000218364 JOSD2Q8TAC2 188 aa23.16■■□□□ 1.3
HTATSF1-201ENST00000218364 SLC44A1Q8WWI5 657 aa23.16■■□□□ 1.3
HTATSF1-201ENST00000218364 SLC7A3Q8WY07 619 aa23.16■■□□□ 1.3
HTATSF1-201ENST00000218364 TMEM120AQ9BXJ8 343 aa23.16■■□□□ 1.3
HTATSF1-201ENST00000218364 DOCK5Q9H7D0 1870 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms