RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 PCK1P35558 622 aa31.22■■■□□ 2.59
PABPN1-201ENST00000216727 ACTN2P35609 894 aa31.22■■■□□ 2.59
PABPN1-201ENST00000216727 KDM7AQ6ZMT4 941 aa31.22■■■□□ 2.59
PABPN1-201ENST00000216727 LIMS2Q7Z4I7 341 aa31.22■■■□□ 2.59
PABPN1-201ENST00000216727 TTC30AQ86WT1 665 aa31.22■■■□□ 2.59
PABPN1-201ENST00000216727 BBOF1Q8ND07 529 aa31.22■■■□□ 2.59
PABPN1-201ENST00000216727 OR6B3Q8NGW1 331 aa31.22■■■□□ 2.59
PABPN1-201ENST00000216727 STK32AQ8WU08 396 aa31.22■■■□□ 2.59
PABPN1-201ENST00000216727 TRAIPQ9BWF2 469 aa31.22■■■□□ 2.59
PABPN1-201ENST00000216727 SLC4A5Q9BY07 1137 aa31.22■■■□□ 2.59
PABPN1-201ENST00000216727 DRG1Q9Y295 367 aaKnown RBP31.22■■■□□ 2.59
PABPN1-201ENST00000216727 BYSLQ13895 437 aaKnown RBP31.22■■■□□ 2.59
PABPN1-201ENST00000216727 AGBL2Q5U5Z8 902 aa31.22■■■□□ 2.59
PABPN1-201ENST00000216727 DENND2CQ68D51 928 aa31.22■■■□□ 2.59
PABPN1-201ENST00000216727 FAM183BPQ6ZVS7 135 aa31.22■■■□□ 2.59
PABPN1-201ENST00000216727 ACSF2Q96CM8 615 aaPredicted RBP31.22■■■□□ 2.59
PABPN1-201ENST00000216727 CNPY3Q9BT09 278 aa31.22■■■□□ 2.59
PABPN1-201ENST00000216727 SPC25Q9HBM1 224 aa31.22■■■□□ 2.59
PABPN1-201ENST00000216727 M0QZ92 97 aa31.21■■■□□ 2.59
PABPN1-201ENST00000216727 RPS6KA5O75582 802 aa31.21■■■□□ 2.59
PABPN1-201ENST00000216727 ADCY8P40145 1251 aa31.21■■■□□ 2.59
PABPN1-201ENST00000216727 TMEM110Q86TL2 294 aa31.21■■■□□ 2.59
PABPN1-201ENST00000216727 CRYBG2Q8N1P7 616 aa31.21■■■□□ 2.59
PABPN1-201ENST00000216727 CCHCR1Q8TD31 782 aa31.21■■■□□ 2.59
PABPN1-201ENST00000216727 SLC35F5Q8WV83 523 aa31.21■■■□□ 2.59
PABPN1-201ENST00000216727 ZIC5Q96T25 663 aa31.21■■■□□ 2.59
PABPN1-201ENST00000216727 FAM118BQ9BPY3 351 aa31.21■■■□□ 2.59
PABPN1-201ENST00000216727 ZWILCHQ9H900 591 aa31.21■■■□□ 2.59
PABPN1-201ENST00000216727 RNF19AQ9NV58 838 aa31.21■■■□□ 2.59
PABPN1-201ENST00000216727 HESX1Q9UBX0 185 aa31.21■■■□□ 2.59
PABPN1-201ENST00000216727 ERICH4A6NGS2 130 aa31.2■■■□□ 2.59
PABPN1-201ENST00000216727 C2CD4BA6NLJ0 364 aa31.2■■■□□ 2.59
PABPN1-201ENST00000216727 A8MXQ7 604 aa31.2■■■□□ 2.59
PABPN1-201ENST00000216727 GPD1P21695 349 aa31.2■■■□□ 2.59
PABPN1-201ENST00000216727 KLRC2P26717 231 aa31.2■■■□□ 2.59
PABPN1-201ENST00000216727 TAF6P49848 677 aa31.2■■■□□ 2.59
PABPN1-201ENST00000216727 SNX16P57768 344 aa31.2■■■□□ 2.59
PABPN1-201ENST00000216727 IFFO1Q0D2I5 559 aa31.2■■■□□ 2.59
PABPN1-201ENST00000216727 NBPF20Q3BBV1 942 aa31.2■■■□□ 2.59
PABPN1-201ENST00000216727 TWF2Q6IBS0 349 aaKnown RBP31.2■■■□□ 2.59
PABPN1-201ENST00000216727 OR6B2Q6IFH4 312 aa31.2■■■□□ 2.59
PABPN1-201ENST00000216727 RSPH3Q86UC2 560 aa31.2■■■□□ 2.59
PABPN1-201ENST00000216727 KBTBD7Q8WVZ9 684 aa31.2■■■□□ 2.59
PABPN1-201ENST00000216727 HHIPL1Q96JK4 782 aa31.2■■■□□ 2.59
PABPN1-201ENST00000216727 ARHGAP39Q9C0H5 1083 aa31.2■■■□□ 2.59
PABPN1-201ENST00000216727 SEMA4AQ9H3S1 761 aa31.2■■■□□ 2.59
PABPN1-201ENST00000216727 DNPEPQ9ULA0 475 aa31.2■■■□□ 2.59
PABPN1-201ENST00000216727 GABRQQ9UN88 632 aa31.2■■■□□ 2.59
PABPN1-201ENST00000216727 TRPV2Q9Y5S1 764 aa31.2■■■□□ 2.59
PABPN1-201ENST00000216727 PCNTO95613 3336 aa31.2■■■□□ 2.58
PABPN1-201ENST00000216727 NR1D1P20393 614 aa31.2■■■□□ 2.58
PABPN1-201ENST00000216727 MIPP30301 263 aa31.2■■■□□ 2.58
PABPN1-201ENST00000216727 TRIP13Q15645 432 aaPredicted RBP31.2■■■□□ 2.58
PABPN1-201ENST00000216727 PMF1Q6P1K2 205 aa31.2■■■□□ 2.58
PABPN1-201ENST00000216727 CXCL17Q6UXB2 119 aa31.2■■■□□ 2.58
PABPN1-201ENST00000216727 LEKR1Q6ZMV7 388 aa31.2■■■□□ 2.58
PABPN1-201ENST00000216727 ARRDC4Q8NCT1 418 aa31.2■■■□□ 2.58
PABPN1-201ENST00000216727 CMASQ8NFW8 434 aaPredicted RBP31.2■■■□□ 2.58
PABPN1-201ENST00000216727 NKD2Q969F2 451 aaPredicted RBP31.2■■■□□ 2.58
PABPN1-201ENST00000216727 CAPS2Q9BXY5 557 aa31.2■■■□□ 2.58
PABPN1-201ENST00000216727 ABT1Q9ULW3 272 aaKnown RBP31.2■■■□□ 2.58
PABPN1-201ENST00000216727 SPTLC1O15269 473 aa31.19■■■□□ 2.58
PABPN1-201ENST00000216727 KDELR1P24390 212 aa31.19■■■□□ 2.58
PABPN1-201ENST00000216727 SOX4Q06945 474 aaPredicted RBP31.19■■■□□ 2.58
PABPN1-201ENST00000216727 SV2CQ496J9 727 aa31.19■■■□□ 2.58
PABPN1-201ENST00000216727 TRMT10CQ7L0Y3 403 aaKnown RBP31.19■■■□□ 2.58
PABPN1-201ENST00000216727 FRMD8P1Q9BZ68 369 aaPredicted RBP31.19■■■□□ 2.58
PABPN1-201ENST00000216727 AAASQ9NRG9 546 aa31.19■■■□□ 2.58
PABPN1-201ENST00000216727 FAM49BQ9NUQ9 324 aa31.19■■■□□ 2.58
PABPN1-201ENST00000216727 CDY2AQ9Y6F7 541 aa31.19■■■□□ 2.58
PABPN1-201ENST00000216727 SEPT4O43236 478 aa31.19■■■□□ 2.58
PABPN1-201ENST00000216727 FLT3LGP49771 235 aa31.19■■■□□ 2.58
PABPN1-201ENST00000216727 ITGA8P53708 1063 aa31.19■■■□□ 2.58
PABPN1-201ENST00000216727 SMTNL2Q2TAL5 461 aa31.19■■■□□ 2.58
PABPN1-201ENST00000216727 DNAI2Q9GZS0 605 aa31.19■■■□□ 2.58
PABPN1-201ENST00000216727 USP18Q9UMW8 372 aa31.19■■■□□ 2.58
PABPN1-201ENST00000216727 TRUB2O95900 331 aaKnown RBP31.18■■■□□ 2.58
PABPN1-201ENST00000216727 PGK1P00558 417 aa31.18■■■□□ 2.58
PABPN1-201ENST00000216727 LRPAP1P30533 357 aa31.18■■■□□ 2.58
PABPN1-201ENST00000216727 GNL1P36915 607 aaPredicted RBP31.18■■■□□ 2.58
PABPN1-201ENST00000216727 SLC29A2Q14542 456 aa31.18■■■□□ 2.58
PABPN1-201ENST00000216727 OASLQ15646 514 aaKnown RBP31.18■■■□□ 2.58
PABPN1-201ENST00000216727 KRT71Q3SY84 523 aa31.18■■■□□ 2.58
PABPN1-201ENST00000216727 KCNT1Q5JUK3 1230 aa31.18■■■□□ 2.58
PABPN1-201ENST00000216727 OLFML1Q6UWY5 402 aa31.18■■■□□ 2.58
PABPN1-201ENST00000216727 GSTA5Q7RTV2 222 aa31.18■■■□□ 2.58
PABPN1-201ENST00000216727 HOOK3Q86VS8 718 aa31.18■■■□□ 2.58
PABPN1-201ENST00000216727 ZDHHC17Q8IUH5 632 aa31.18■■■□□ 2.58
PABPN1-201ENST00000216727 RXFP2Q8WXD0 754 aa31.18■■■□□ 2.58
PABPN1-201ENST00000216727 ANAPC5Q9UJX4 755 aa31.18■■■□□ 2.58
PABPN1-201ENST00000216727 RIPK2O43353 540 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 ALDH1A1P00352 501 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 RPLP2P05387 115 aaKnown RBP31.17■■■□□ 2.58
PABPN1-201ENST00000216727 RARBP10826 455 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 VCPP55072 806 aaKnown RBP31.17■■■□□ 2.58
PABPN1-201ENST00000216727 GDF6Q6KF10 455 aaPredicted RBP31.17■■■□□ 2.58
PABPN1-201ENST00000216727 BBS12Q6ZW61 710 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 ALLCQ8N6M5 410 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 APPL2Q8NEU8 664 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 CENPHQ9H3R5 247 aa31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms