RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 GYS2P54840 703 aa20.74■□□□□ 0.91
TNFRSF1A-201ENST00000162749 TAS2R40P59535 323 aa20.74■□□□□ 0.91
TNFRSF1A-201ENST00000162749 PIWIL1Q96J94 861 aaKnown RBP20.74■□□□□ 0.91
TNFRSF1A-201ENST00000162749 SLC4A5Q9BY07 1137 aa20.74■□□□□ 0.91
TNFRSF1A-201ENST00000162749 LCMT1Q9UIC8 334 aa20.74■□□□□ 0.91
TNFRSF1A-201ENST00000162749 F8VP50 259 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 I3L4J1 428 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 B4GALT3O60512 393 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 TKTP29401 623 aaKnown RBP20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 BCAT1P54687 386 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 BST2Q10589 180 aaKnown RBP20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 SEL1L2Q5TEA6 688 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 KIAA0319Q5VV43 1072 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 C8orf74Q6P047 294 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 DNAJC5GQ8N7S2 189 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 NIPA2Q8N8Q9 360 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 FNIP1Q8TF40 1166 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 UROC1Q96N76 676 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 KRT12Q99456 494 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 TMEM161AQ9NX61 479 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 NR2E1Q9Y466 385 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 PTPRDP23468 1912 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 PSTPIP1O43586 416 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 LHX1P48742 406 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 FAAP100Q0VG06 881 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 PIGHQ14442 188 aaPredicted RBP20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 MAP9Q49MG5 647 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 FAM102AQ5T9C2 384 aaPredicted RBP20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 CCDC70Q6NSX1 233 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 FAM183BPQ6ZVS7 135 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 TMEM110Q86TL2 294 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 RHOT1Q8IXI2 618 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 FUKQ8N0W3 1084 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 EMC1Q8N766 993 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 HASPINQ8TF76 798 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 STK32AQ8WU08 396 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 SCLYQ96I15 445 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 NAP1L3Q99457 506 aaPredicted RBP20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 MIS12Q9H081 205 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 HIPK3Q9H422 1215 aa20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 FNDC1Q4ZHG4 1894 aaPredicted RBP20.73■□□□□ 0.91
TNFRSF1A-201ENST00000162749 ENPP3O14638 875 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 GABBR2O75899 941 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 ITGB1P05556 798 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 TCF4P15884 667 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 PTPN1P18031 435 aaKnown RBP20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 SLC7A5Q01650 507 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 DSC1Q08554 894 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 NOMO2Q5JPE7 1267 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 CTU1Q7Z7A3 348 aaKnown RBP20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 ZNF280BQ86YH2 543 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 DIS3LQ8TF46 1054 aaKnown RBP20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 GDAP1L1Q96MZ0 367 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 VIPAS39Q9H9C1 493 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 F8W810 466 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 CCDC188H7C350 402 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 DDHD2O94830 711 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 ODC1P11926 461 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 BRCC3P46736 316 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 TLE2Q04725 743 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 CLUL1Q15846 466 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 TCTN1Q2MV58 587 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 TRIM60Q495X7 471 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 FBXO46Q6PJ61 603 aaPredicted RBP20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 ADAT2Q7Z6V5 191 aaKnown RBP20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 SEPT8Q92599 483 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 HNRNPABQ99729 332 aaKnown RBP20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 DDX47Q9H0S4 455 aaKnown RBP20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 CRTAC1Q9NQ79 661 aa20.72■□□□□ 0.91
TNFRSF1A-201ENST00000162749 VWA8A3KMH1 1905 aa20.71■□□□□ 0.91
TNFRSF1A-201ENST00000162749 COL6A1P12109 1028 aa20.71■□□□□ 0.91
TNFRSF1A-201ENST00000162749 GPS2Q13227 327 aa20.71■□□□□ 0.91
TNFRSF1A-201ENST00000162749 OR6B2Q6IFH4 312 aa20.71■□□□□ 0.91
TNFRSF1A-201ENST00000162749 KLHL7Q8IXQ5 586 aa20.71■□□□□ 0.91
TNFRSF1A-201ENST00000162749 TOX2Q96NM4 488 aa20.71■□□□□ 0.91
TNFRSF1A-201ENST00000162749 ELAC1Q9H777 363 aaKnown RBP20.71■□□□□ 0.91
TNFRSF1A-201ENST00000162749 TBC1D13Q9NVG8 400 aa20.71■□□□□ 0.91
TNFRSF1A-201ENST00000162749 HPCAL4Q9UM19 191 aa20.71■□□□□ 0.91
TNFRSF1A-201ENST00000162749 DCDC2CA8MYV0 355 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 M0QZQ0 153 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 PSMA2P25787 234 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 CCL23P55773 120 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 C1QTNF8P60827 252 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 GLE1Q53GS7 698 aaKnown RBP20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 MDH1BQ5I0G3 518 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 C1orf53Q5VUE5 145 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 DCLRE1AQ6PJP8 1040 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 OLFML1Q6UWY5 402 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 PAQR9Q6ZVX9 377 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 SCUBE3Q8IX30 993 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 URGCPQ8TCY9 931 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 AENQ8WTP8 325 aaKnown RBP20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 APBB2Q92870 758 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 PLVAPQ9BX97 442 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 PPP1R12CQ9BZL4 782 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 NLRC5Q86WI3 1866 aa20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 PAPSS1O43252 624 aaPredicted RBP20.7■□□□□ 0.9
TNFRSF1A-201ENST00000162749 SSR1P43307 286 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms