RNA–Protein interactions for RNA: ENSMUST00000113717.7

Sptan1-204, Transcript of Spectrin alpha chain, non-erythrocytic 1, mousemouse

TSL 1 (best) BASIC

Gene Sptan1, Length 7,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptan1-204ENSMUST00000113717 Capn13Q3UW68 665 aa11.27□□□□□ -0.6
Sptan1-204ENSMUST00000113717 Slc9b1Q8C0X2 565 aa11.27□□□□□ -0.6
Sptan1-204ENSMUST00000113717 NgrnQ99KS2 293 aaKnown RBP11.27□□□□□ -0.6
Sptan1-204ENSMUST00000113717 Mcrs1Q99L90 462 aa11.27□□□□□ -0.6
Sptan1-204ENSMUST00000113717 Trim8Q99PJ2 551 aa11.27□□□□□ -0.6
Sptan1-204ENSMUST00000113717 Rnf25Q9QZR0 456 aa11.27□□□□□ -0.6
Sptan1-204ENSMUST00000113717 RereQ80TZ9 1558 aa11.27□□□□□ -0.6
Sptan1-204ENSMUST00000113717 Ice1E9Q286 2241 aaKnown RBP11.27□□□□□ -0.6
Sptan1-204ENSMUST00000113717 Gm21964A0A1W2P7S4 437 aa11.27□□□□□ -0.6
Sptan1-204ENSMUST00000113717 HdcP23738 662 aa11.27□□□□□ -0.6
Sptan1-204ENSMUST00000113717 Pstpip1P97814 415 aa11.27□□□□□ -0.6
Sptan1-204ENSMUST00000113717 Atg9aQ68FE2 551 aa11.27□□□□□ -0.6
Sptan1-204ENSMUST00000113717 Nsun6Q7TS68 476 aa11.27□□□□□ -0.6
Sptan1-204ENSMUST00000113717 Gtf3c4Q8BMQ2 817 aaKnown RBP11.27□□□□□ -0.6
Sptan1-204ENSMUST00000113717 Nox1Q8CIZ9 591 aa11.27□□□□□ -0.6
Sptan1-204ENSMUST00000113717 Nmd3Q99L48 503 aaKnown RBP11.27□□□□□ -0.6
Sptan1-204ENSMUST00000113717 Angpt1O08538 498 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 MafgO54790 162 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Rbp3P49194 1234 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Krt6aP50446 553 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Ptpn5P54830 541 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 CamkvQ3UHL1 512 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Ceacam5Q3UKK2 947 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Kcnk18Q6VV64 394 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Prpf39Q8K2Z2 665 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Eif3lQ8QZY1 564 aaKnown RBP11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Fam49bQ921M7 324 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 PmpcbQ9CXT8 489 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Cdc42ep4Q9JM96 349 aaKnown RBP11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Entpd5Q9WUZ9 427 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Klhl18A0A0G2JGN5 579 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Krt76Q3UV17 594 aaKnown RBP11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Casc4Q6P2L7 435 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Ifi44Q8BV66 422 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Tbl3Q8C4J7 801 aaKnown RBP11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Pcdhb21Q91V48 774 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Trex1Q91XB0 314 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Ubxn2aQ99KJ0 258 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Pik3cgQ9JHG7 1102 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 CemipQ8BI06 1361 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Pcna-ps2A0A140T8V5 261 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Atp8b4A2ANX3 1194 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Itga9B8JK39 1036 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Hps1O08983 704 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Atp9aO70228 1047 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Cdh16O88338 830 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 ZfrO88532 1074 aaKnown RBP11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Rrm2P11157 390 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Gjb4Q02738 266 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Rnf139Q7TMV1 668 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Drd5Q8BLD9 478 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Taf2Q8C176 1104 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Kcnq3Q8K3F6 873 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Depdc7Q91WS7 511 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Fam32aQ9CR80 112 aaKnown RBP11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Slc26a4Q9R155 780 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Gm20911A0A087WSS0 222 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Olfr292F8VQ84 308 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Gabpb1Q00420 383 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Klhdc10Q6PAR0 439 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Alg9Q8VDI9 611 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Atpaf2Q91YY4 289 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 S100pbpQ9D5K4 396 aa11.27□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Pnldc1B2RXZ1 531 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Kif1cO35071 1100 aaKnown RBP11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Calb2Q08331 271 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Edrf1Q6GQV7 1239 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Zfp512bQ6PHP4 879 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Tmem270Q6UJB9 264 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Snx9Q91VH2 595 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Poc5Q9DBS8 558 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Dlc1Q9R0Z9 1092 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Ttll9A2APC3 461 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Mup6A2AV72 179 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Dennd5bA2RSQ0 1274 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Atf6F6VAN0 656 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 SprtnG3X912 497 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Clec4fP70194 548 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Sgo2Q7TSY8 1164 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Znf879Q8BI99 563 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 C8aQ8K182 587 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 TraipQ8VIG6 470 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Mzt2Q9CQ25 159 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Ptpn4Q9WU22 926 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Xirp1O70373 1129 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Got1P05201 413 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 CtshP49935 333 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 SpoplQ2M2N2 392 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Eme1Q8BJW7 570 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Syne4Q8CII8 388 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Gpr63Q9EQQ3 425 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Mdc1Q5PSV9 1707 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Eif2s1Q6ZWX6 315 aaKnown RBP11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Srrm3Q80WV7 648 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Ces4aQ8R0W5 563 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Gramd1aQ8VEF1 722 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Extl2Q9ES89 330 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Ruvbl2Q9WTM5 463 aaKnown RBP11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 EloblA6PWE0 161 aa11.26□□□□□ -0.61
Sptan1-204ENSMUST00000113717 Scd1P13516 355 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms