RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 B3gat3P58158 335 aa13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 Smcr8Q3UMB5 935 aa13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 Klra5Q60652 266 aa13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 HarsQ61035 509 aa13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 Cachd1Q6PDJ1 1288 aa13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 Polr2eQ80UW8 210 aaKnown RBP13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 Cdc23Q8BGZ4 597 aa13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 Nop53Q8BK35 484 aaKnown RBP13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 Slc9a4Q8BUE1 797 aa13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 A430089I19RikQ8C9W1 407 aa13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 Prl7b1Q8CGZ9 251 aa13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 Kctd15Q8K0E1 283 aa13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 Chn1Q91V57 459 aa13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 Pcdhb2Q91Y00 799 aa13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 CmasQ99KK2 432 aaKnown RBP13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 Fuca1Q99LJ1 452 aa13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 Sar1bQ9CQC9 198 aa13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 Smc1aQ9CU62 1233 aaKnown RBP13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 Ddx56Q9D0R4 546 aaKnown RBP13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 GatmQ9D964 423 aaKnown RBP13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 Irx4Q9QY61 515 aa13.09□□□□□ -0.31
Trim50-202ENSMUST00000111180 Ttc3O88196 1979 aaKnown RBP13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Gm13276A0A087WR18 182 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Gm8994E9PV04 411 aaKnown RBP13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Mroh9G5E8L9 891 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Smim22J3QP37 91 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Birc5O70201 140 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Tcp1P11983 556 aaKnown RBP13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 GlulP15105 373 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Smad4P97471 551 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Tcp11Q01755 566 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 GscQ02591 256 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 GaltQ03249 379 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Col9a1Q05722 921 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Znf367Q0VDT2 340 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Dzip1lQ499E4 774 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Tas2r125Q7M710 311 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Anapc5Q8BTZ4 740 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Mtnr1bQ8CIQ6 364 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 TxlnbQ8VBT1 685 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Uroc1Q8VC12 676 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Snrnp25Q8VIK1 123 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Fam76aQ922G2 307 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Acsl3Q9CZW4 720 aaKnown RBP13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 GOLGA7BQ9D428 167 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Dnajb4Q9D832 337 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Cyp39a1Q9JKJ9 470 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Gde1Q9JL56 331 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Umodl1Q5DID3 1319 aa13.08□□□□□ -0.32
Trim50-202ENSMUST00000111180 Col4a6B1AVK5 1691 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 4930402K13RikB1AW18 415 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Fam71aB7XG49 585 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Gm3415J3QMS8 315 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Olfr743L7N1Y2 311 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 XlrP05531 208 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Nr2c2P49117 596 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Mxi1P50540 228 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Btg3P50615 252 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 LipeP54310 759 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Serpina5P70458 405 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Adcy6Q01341 1165 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Pi4k2aQ2TBE6 479 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Q3UE31 404 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Fam196aQ3USH1 422 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 PighQ5M9N4 188 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 PtprjQ64455 1238 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Snd1Q78PY7 910 aaKnown RBP13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Fbxw21Q8BI38 468 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Rsl1d1Q8BVY0 452 aaKnown RBP13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 UvragQ8K245 698 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Ctage5Q8R311 779 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Pcdhgb4Q91XX6 912 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Rrp1bQ91YK2 724 aaKnown RBP13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Q922C1 641 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Lztr1Q9CQ33 837 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Rpa3Q9CQ71 121 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Cul2Q9D4H8 745 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Gm3404Q9D506 307 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Fgf22Q9ESS2 162 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Cacng4Q9JJV4 327 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Homer2Q9QWW1 354 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Rpl9-ps1S4R1R7 191 aa13.07□□□□□ -0.32
Trim50-202ENSMUST00000111180 Myo7aP97479 2215 aa13.06□□□□□ -0.32
Trim50-202ENSMUST00000111180 Cep295Q8BQ48 2412 aa13.06□□□□□ -0.32
Trim50-202ENSMUST00000111180 Gm45140A0A0N4SUM8 220 aa13.06□□□□□ -0.32
Trim50-202ENSMUST00000111180 Maml3D4QGC2 1135 aa13.06□□□□□ -0.32
Trim50-202ENSMUST00000111180 Gm1661E9Q963 441 aa13.06□□□□□ -0.32
Trim50-202ENSMUST00000111180 Entpd2O55026 495 aa13.06□□□□□ -0.32
Trim50-202ENSMUST00000111180 Ptp4a2O70274 167 aa13.06□□□□□ -0.32
Trim50-202ENSMUST00000111180 Psmc3O88685 442 aa13.06□□□□□ -0.32
Trim50-202ENSMUST00000111180 Rps6ka1P18653 724 aa13.06□□□□□ -0.32
Trim50-202ENSMUST00000111180 GssP51855 474 aa13.06□□□□□ -0.32
Trim50-202ENSMUST00000111180 Slc1a1P51906 523 aa13.06□□□□□ -0.32
Trim50-202ENSMUST00000111180 Smarcad1Q04692 1021 aa13.06□□□□□ -0.32
Trim50-202ENSMUST00000111180 Gpr15Q0VDU3 360 aa13.06□□□□□ -0.32
Trim50-202ENSMUST00000111180 Cpne7Q0VE82 557 aa13.06□□□□□ -0.32
Trim50-202ENSMUST00000111180 Trim43aQ3TL54 445 aa13.06□□□□□ -0.32
Trim50-202ENSMUST00000111180 Zscan4fQ3URS2 506 aa13.06□□□□□ -0.32
Trim50-202ENSMUST00000111180 Traf3Q60803 567 aa13.06□□□□□ -0.32
Trim50-202ENSMUST00000111180 Vav2Q60992 868 aa13.06□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms