RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Capn3Q64691 821 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Mapk4Q6P5G0 583 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Cacna2d2Q6PHS9 1154 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Rimbp2Q80U40 1072 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 RimklbQ80WS1 387 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Mical2Q8BML1 960 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ccdc68Q8BVC4 333 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 SowahcQ8C0J6 512 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Wdr60Q8C761 999 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 OgtQ8CGY8 1046 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Arfip2Q8K221 341 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Trpv6Q91WD2 767 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Tas1r3Q925D8 858 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ccdc22Q9JIG7 627 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Pcsk1nQ9QXV0 258 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Dhtkd1A2ATU0 921 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Apold1E9Q0X2 246 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Gm3424L7N298 263 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Gm8246M0QWX9 263 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Efna5O08543 228 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Tspyl1O88852 379 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Kif5aP33175 1027 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Mxi1P50540 228 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Lhx5P61375 402 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ttc9Q3V038 219 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Abhd15Q5F2F2 459 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ptk6Q64434 451 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Rbl2Q64700 1135 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Btbd10Q80X66 475 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Rbm12b1Q80YR9 836 aaKnown RBP13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Q8BZE1 841 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ldlrap1Q8C142 308 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Q8CD60 292 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Adgrg2Q8CJ12 1009 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Pde6cQ91ZQ1 861 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Cpt1bQ924X2 772 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Rmi1Q9D4G9 616 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ppp1r12aQ9DBR7 1029 aaKnown RBP13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Plscr2Q9DCW2 307 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Cpsf3Q9QXK7 684 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Nphs1Q9QZS7 1256 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Tnfsf13bQ9WU72 309 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Atp6v1c1Q9Z1G3 382 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 Pck1Q9Z2V4 622 aa13.5□□□□□ -0.25
Nup88-203ENSMUST00000108531 MipepA6H611 711 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Olfr310B2RVZ1 332 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 F6Y6L6 278 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 StrnO55106 780 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Myl4P09541 193 aaKnown RBP13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Hoxc6P10629 235 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 SftpbP50405 377 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Sesn2P58043 480 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Npas2P97460 816 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 InhbaQ04998 424 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Glt6d1Q2NKH9 311 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 9130409I23RikQ3TS87 320 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Znf185Q62394 352 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Sv2cQ69ZS6 727 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Cdc14aQ6GQT0 603 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Nudt16Q6P3D0 195 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Cypt2Q6P924 180 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Rad54bQ6PFE3 886 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Dzip3Q7TPV2 1204 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Znf365Q8BG89 408 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Wdr35Q8BND3 1181 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Arhgap24Q8C4V1 747 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Syt15Q8C6N3 418 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Kctd12bQ8C7J6 292 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Prpf31Q8CCF0 499 aaKnown RBP13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Trappc12Q8K2L8 797 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Spag16Q8K450 639 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Hkdc1Q91W97 915 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Socs4Q91ZA6 436 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Tceal1Q921P9 165 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Slc39a3Q99K24 317 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Med10Q9CXU0 135 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Med7Q9CZB6 233 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ttc33Q9D6K7 262 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Mrpl4Q9DCU6 294 aaKnown RBP13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Spock2Q9ER58 423 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Rap1gapA2ALS5 663 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Arhgap42B2RQE8 841 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Fignl2J3QK54 644 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Clk2O35491 499 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Tnnc2P20801 160 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 YwhagP61982 247 aaKnown RBP13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Crnkl1P63154 690 aaKnown RBP13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 PrkcbP68404 671 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 RenbpP82343 430 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Epas1P97481 874 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Atp11aP98197 1187 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Gm3414Q3TNU4 584 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Grm6Q5NCH9 871 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Tfdp2Q64163 446 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 2700097O09RikQ6PGK3 301 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Acap2Q6ZQK5 770 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ankzf1Q80UU1 748 aaKnown RBP13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Rps6kc1Q8BLK9 1056 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Taf5Q8C092 801 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Lrif1Q8CDD9 755 aa13.49□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms