RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Rap1gapA2ALS5 663 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Zfand4D3Z3C6 739 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Smim22J3QP37 91 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Cldn5O54942 218 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Cyp8b1O88962 500 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 RhoP15409 348 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Serpinh1P19324 417 aaKnown RBP12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Senp1P59110 640 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Usp46P62069 366 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Hmgb1P63158 215 aaKnown RBP12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Acot6Q32Q92 419 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Pik3r5Q5SW28 871 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Mre11Q61216 706 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Smarcd1Q61466 515 aaKnown RBP12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Dsg1aQ61495 1057 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 DbhQ64237 622 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Papd5Q68ED3 633 aaKnown RBP12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Defb34Q7TNV8 81 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Pum3Q8BKS9 647 aaKnown RBP12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 AsphQ8BSY0 741 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Sox30Q8CGW4 782 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Gnl3Q8CI11 538 aaKnown RBP12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Mrpl38Q8K2M0 380 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Golph3lQ8R088 285 aaKnown RBP12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Zfp566Q8VCI1 386 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 HgsQ99LI8 775 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Yaf2Q99LW6 179 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Rbm31yQ9D3U4 565 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Serpina9Q9D7D2 418 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Gm5934D3Z4U6 212 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Chrna9G3X8Z7 479 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Kcnh2O35219 1162 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Tnfrsf18O35714 228 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Tnk2O54967 1055 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Dmp1O55188 503 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Fgd3O88842 733 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Ly6aP05533 134 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Fam167bP17257 162 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 VegfcP97953 415 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Agxt2Q3UEG6 513 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Cldn11Q60771 207 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Serpinb6Q60854 378 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Dnajc1Q61712 552 aaKnown RBP12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Olfr212Q7TS33 327 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Vtcn1Q7TSP5 283 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Fbxw21Q8BI38 468 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Slc9b1Q8C0X2 565 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Q8CDN1 933 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 AagabQ8R2R3 316 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 AdigQ8R400 80 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Tbc1d19Q8VDV7 526 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Lpin3Q99PI4 848 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Fam174aQ9D3L0 190 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Gtf2h1Q9DBA9 547 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Rnf14Q9JI90 485 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Abhd2Q9QXM0 425 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Dctpp1Q9QY93 170 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Trpv2Q9WTR1 756 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Trpm6Q8CIR4 2028 aa12.88□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Mctp1E9PV86 951 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Dcpp2E9PYC2 171 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Dcpp1L7N1X9 171 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 CtssO70370 340 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Ctnnal1O88327 731 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 GpiP06745 558 aaKnown RBP12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Zfy1P10925 782 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Ctnnd1P30999 938 aaKnown RBP12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Nek1P51954 1203 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 CidecP56198 239 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Uchl4P58321 233 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Serpina5P70458 405 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Col9a1Q05722 921 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Trim72Q1XH17 477 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Q3TQQ9 903 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Dcaf17Q3TUL7 519 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 SlmapQ3URD3 845 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Nab2Q61127 525 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 DazlQ64368 298 aaKnown RBP12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Snx19Q6P4T1 997 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Mon1aQ6PDG8 556 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Ppp1r15bQ8BFW3 697 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Tmem169Q8BG50 297 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Enox1Q8BHR2 643 aaKnown RBP12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Slc7a14Q8BXR1 771 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Syt15Q8C6N3 418 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Nle1Q8VEJ4 485 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Znf622Q91VY9 476 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Q922M7 232 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Thap2Q9D305 217 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Q9D9D9 101 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Ccdc89Q9DA73 370 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Slfn14V9GXG1 899 aa12.87□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Gm27029A2A4P4 543 aa12.86□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Gm10720D3Z1I5 223 aa12.86□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Gm5624F6ZZG8 207 aa12.86□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 LdhcP00342 332 aa12.86□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Chmp6P0C0A3 200 aa12.86□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Mup5P11591 180 aa12.86□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Folr1P35846 255 aa12.86□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Dsc3P55850 896 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 42.9 ms