RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 F13a1Q8BH61 732 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Nutm1Q8BHP2 1126 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Arhgap22Q8BL80 702 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Fam221bQ8C627 487 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Fam221aQ8C790 301 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Srgap1Q91Z69 1062 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Alg1Q921Q3 482 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 HgsQ99LI8 775 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Rnaseh2cQ9CQ18 166 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 RTRAFQ9CQE8 244 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Copb1Q9JIF7 953 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Mybbp1aQ7TPV4 1344 aaKnown RBP9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Cyp4f17G3UW78 524 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ninj1O70131 152 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 S100a6P14069 89 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 VclQ64727 1066 aaKnown RBP9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 WlsQ6DID7 541 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gm21985Q6P6P5 1106 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ankrd45Q810N6 248 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Znf786Q8BV42 777 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Cdh19E9Q3A7 770 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Aff1O88573 1216 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Il2P04351 169 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Calb1P12658 261 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 PrkcbP68404 671 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Tmem231Q3U284 315 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ttbk2Q3UVR3 1243 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ampd1Q3V1D3 745 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Serpinb9fQ80UK5 377 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Lrrc39Q8BGI7 337 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Vcpip1Q8CDG3 1220 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Eva1bQ8K2Y3 164 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Atl3Q91YH5 541 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Traf7Q922B6 594 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Lingo1Q9D1T0 614 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Sh2d3cQ9QZS8 854 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 NcdnQ9Z0E0 729 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Atp12aQ9Z1W8 1035 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gm11985A0A1B0GS61 206 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 RcvrnP34057 202 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 NcstnP57716 708 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Serpinb6Q60854 378 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Olfr814Q7TRH4 310 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 CyldQ80TQ2 952 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Rab3gap1Q80UJ7 981 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Q810N5 247 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Timm29Q8BGX2 266 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Mettl3Q8C3P7 580 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Tspan8Q8R3G9 235 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Map3k21Q8VDG6 1002 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ciapin1Q8WTY4 309 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Nme5Q99MH5 211 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Emc2Q9CRD2 297 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Usp18Q9WTV6 368 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Arhgef37A1IGU4 676 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Sec24cG3X972 1096 aaKnown RBP9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gimap9G3X987 291 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Rc3h2P0C090 1187 aaKnown RBP9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Setd4P58467 439 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Rnf113a2Q14B01 337 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Kcnc2Q14B80 642 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Vwa3aQ3UVV9 1148 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Kdm7aQ3UWM4 940 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 9930111J21Rik1Q5SVP0 844 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Cdkl3Q8BLF2 595 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Hirip3Q8BLH7 601 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gimap5Q8BWF2 308 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Slc35g1Q8BY79 368 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Taf2Q8C176 1104 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Acad10Q8K370 1069 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Senp2Q91ZX6 588 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Far1Q922J9 515 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Krt34Q9D646 392 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Sh3bgrlQ9JJU8 114 aaKnown RBP9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Eya4Q9Z191 616 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ms4a14A0A087WSD2 1232 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Cyp8b1O88962 500 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Abcd4O89016 606 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Jmjd7P0C872 316 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Cap1P40124 474 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Coq8bQ566J8 533 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gtf2a2Q80ZM7 109 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Dhx32Q8BZS9 744 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ptcd2Q8R3K3 381 aaKnown RBP9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Smap1Q91VZ6 440 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Sec16bQ91XT4 1051 aa9.31□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Fam124aD3Z5V4 536 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Atf6F6VAN0 656 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 E230025N22RikG5E8S3 482 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Rdh7O88451 316 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Klra1P20937 262 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 ZufspQ3T9Z9 577 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Magee2Q52KG3 523 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Rapgefl1Q68EF8 662 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Lrrn2Q6PHP6 730 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gucy1b2Q8BXH3 824 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 MturnQ8CGA4 131 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Tinagl1Q99JR5 466 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Tbx20Q9ES03 445 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Eya2O08575 532 aa9.3□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms