RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Ankrd45Q810N6 248 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Tmco3Q8BH01 678 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 PdhxQ8BKZ9 501 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Arhgef33Q8BW86 850 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Vcpip1Q8CDG3 1220 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Fam114a2Q8VE88 497 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Olfr348Q8VGK3 313 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 VillQ91YD6 859 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Synpo2Q91YE8 1087 aaKnown RBP9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Lrrc57Q9D1G5 239 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Rpf2Q9JJ80 306 aaKnown RBP9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 EmcnQ9R0H2 261 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Olfr1023A2ASU6 311 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 TpteG5E8H5 664 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 P01631 113 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Mup5P11591 180 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Btg3P50615 252 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 GssP51855 474 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Abi2P62484 446 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Q3UE31 404 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ccdc42Q5SV66 316 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Rad9bQ6WBX7 403 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 WtipQ7TQJ8 398 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Thnsl1Q8BH55 747 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Tmem132cQ8CEF9 1099 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Cd209bQ8CJ91 325 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Rassf9Q8K342 435 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Il17cQ8K4C5 194 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Arfgap2Q99K28 520 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Rpl17Q9CPR4 184 aaKnown RBP9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Rpa3Q9CQ71 121 aa9.36□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Zfp472B0V2W5 534 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gm10717D3Z1I8 228 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Pate1E9Q658 125 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ptp4a2O70274 167 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Mybl1P51960 751 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Arpp19P56212 112 aaKnown RBP9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Sec1P97353 368 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Smarcad1Q04692 1021 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gsdmc2Q2KHK6 480 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gsdmc4Q3TR54 480 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 H2-Q2Q4KN81 360 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Olfr8Q60892 310 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Xpo1Q6P5F9 1071 aaKnown RBP9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 DstykQ6XUX1 927 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Rps6kc1Q8BLK9 1056 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Anapc5Q8BTZ4 740 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Fam43aQ8BUP8 424 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Slc13a4Q8BZ82 625 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gsdmc3Q8CB12 480 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Rbm12Q8R4X3 992 aaKnown RBP9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Snx9Q91VH2 595 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Pcdhgb4Q91XX6 912 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Rxfp2Q91ZZ5 737 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Mrpl9Q99N94 265 aaKnown RBP9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Pard3bQ9CSB4 1203 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ddx56Q9D0R4 546 aaKnown RBP9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Stk4Q9JI11 487 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Fam81bA0A140LI28 432 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Zfp990B1AVN5 605 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Cacna2d1O08532 1103 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 CaluO35887 315 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Vti1aO89116 217 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Camk4P08414 469 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 TktP40142 623 aaKnown RBP9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Mxi1P50540 228 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gabrb2P63137 512 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 EfsQ64355 560 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gpbp1l1Q6NZP2 473 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Csnk1g1Q8BTH8 459 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ttc24Q8BYG0 334 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ttc16Q8C1F5 767 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Rab30Q923S9 203 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Cfap57Q9D180 1249 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Atad1Q9D5T0 361 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Cnot8Q9D8X5 292 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Rassf7Q9DD19 359 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Noa1Q9JJG9 693 aaKnown RBP9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Clec1bQ9JL99 229 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 St6galnac4Q9R2B6 360 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gabbr1Q9WV18 960 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Smarcb1Q9Z0H3 385 aa9.35□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ms4a14A0A087WSD2 1232 aa9.34□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Rfx8D3YU81 596 aa9.34□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Zfp384E9Q1A5 584 aaKnown RBP9.34□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 C6E9Q6D8 931 aa9.34□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gm3642K7N6V4 267 aa9.34□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Dmp1O55188 503 aa9.34□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ctnnal1O88327 731 aa9.34□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ephb3P54754 993 aaKnown RBP9.34□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Foxp2P58463 714 aa9.34□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 CkbQ04447 381 aa9.34□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Serac1Q3U213 654 aa9.34□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Krt35Q497I4 455 aa9.34□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ccdc125Q5U465 500 aa9.34□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Ddx3yQ62095 658 aaKnown RBP9.34□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 RadilQ69Z89 1099 aa9.34□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Nlrp14Q6B966 993 aa9.34□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Prrt3Q6PE13 971 aa9.34□□□□□ -0.91
Ccdc28a-201ENSMUST00000052648 Gpr142Q7TQN9 365 aa9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 67.8 ms