RNA–Protein interactions for RNA: ENSMUST00000020877.8

Twistnb-201, Transcript of DNA-directed RNA polymerase I subunit RPA43, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Twistnb, Length 4,325 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Twistnb-201ENSMUST00000020877 Vcam1P29533 739 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Xlr3aQ60595 226 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Gngt2Q61017 69 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Tfdp2Q64163 446 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Vmn2r26Q6TAC4 855 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 RubcnQ80U62 956 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Usp1Q8BJQ2 784 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Tcaf1Q8BNE1 924 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Sept11Q8C1B7 431 aaKnown RBP13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Kdm1bQ8CIG3 826 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ttc30a1Q99J38 664 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ndufaf1Q9CWX2 328 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ror1Q9Z139 937 aa13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 N4bp2F8VQG7 1678 aaKnown RBP13.5□□□□□ -0.25
Twistnb-201ENSMUST00000020877 XdhQ00519 1335 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Prdm2A2A7B5 1709 aaKnown RBP13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ccdc62E9PVD1 701 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Pcdh9F8VPK8 1237 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Il13ra2O88786 383 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 PrkcbP68404 671 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Shox2P70390 331 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Nsun6Q7TS68 476 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Dnajc9Q91WN1 259 aaKnown RBP13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Kif19Q99PT9 997 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 CacybpQ9CXW3 229 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Rmi1Q9D4G9 616 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 MrrfQ9D6S7 262 aaKnown RBP13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Msh5Q9QUM7 833 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Znf354bQ9QXT9 601 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Atp6v1c1Q9Z1G3 382 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Shoc2O88520 582 aaKnown RBP13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Glud1P26443 558 aaKnown RBP13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Mxi1P50540 228 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 RnaselQ05921 735 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Pyroxd1Q3TMV7 498 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ogfod1Q3U0K8 545 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Acvrl1Q61288 502 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 WlsQ6DID7 541 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 E2f7Q6S7F2 904 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Q8BGC1 442 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Svs3bQ8BZH8 265 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Stk33Q924X7 491 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 DcpsQ9DAR7 338 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ndufa13Q9ERS2 144 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Apobec2Q9WV35 224 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Kpna7C0LLJ0 499 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Slc4a9E9PUP3 929 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Serpinb3aG3X9V8 387 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Hmgb2P30681 210 aaKnown RBP13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ccndbp1Q3TVC7 356 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Rbm20Q3UQS8 1199 aaKnown RBP13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Gm13103Q4VAD2 491 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Fam160a1Q505K2 1081 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Kiaa0319Q5SZV5 1081 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Parp6Q6P6P7 630 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Fam107aQ78TU8 144 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Fra10ac1Q8BP78 315 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Fcho1Q8K285 873 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Irak4Q8R4K2 459 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 AenQ9CZI9 336 aaKnown RBP13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Kat2aQ9JHD2 830 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Chek2Q9Z265 546 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Plcg1Q62077 1302 aa13.49□□□□□ -0.25
Twistnb-201ENSMUST00000020877 GabreA2AMW3 916 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Atf6F6VAN0 656 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Cyp2b9P12790 491 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Cd72P21855 354 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Alkbh5Q3TSG4 395 aaKnown RBP13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ugt3a1Q3UP75 523 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ankrd34bQ3UUF8 508 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Grid1Q61627 1009 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Zfp120Q8BZW4 436 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Q8CD60 292 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ccdc92Q8VDN4 314 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Chd2E9PZM4 1827 aaKnown RBP13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Abcb11Q9QY30 1321 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Dhx35A2ACQ1 703 aaKnown RBP13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Tp53P02340 387 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Bcat1P24288 386 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Slc17a7Q3TXX4 560 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Dclk2Q6PGN3 756 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Glra2Q7TNC8 452 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Ppp4r4Q8C0Y0 875 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Gga1Q8R0H9 635 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Znf445Q8R2V3 986 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Trim7Q923T7 510 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Q9CPS8 106 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 PmpcbQ9CXT8 489 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Rab11fip1Q9D620 645 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Prmt2Q9R144 448 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Klrc1Q9Z202 244 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Fam171a2A2A699 822 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Top3aO70157 1003 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Mcpt4P21812 246 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Stx1bP61264 288 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 PhexP70669 749 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Gm29609Q3UU56 907 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Gtf3c2Q8BL74 907 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Clic5Q8BXK9 251 aa13.48□□□□□ -0.25
Twistnb-201ENSMUST00000020877 Olfr1499Q8VG65 314 aa13.48□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms