RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W TEM1P38987 245 aa4.72□□□□□ -1.65
RPN7YPR108W THG1P53215 237 aaKnown RBP4.72□□□□□ -1.65
RPN7YPR108W YNL092WP53934 400 aa4.72□□□□□ -1.65
RPN7YPR108W RPL15BP54780 204 aaPredicted RBP4.72□□□□□ -1.65
RPN7YPR108W IZH1Q03419 316 aa4.72□□□□□ -1.65
RPN7YPR108W ARC18Q05933 178 aaKnown RBP4.72□□□□□ -1.65
RPN7YPR108W RXT3Q07458 294 aa4.72□□□□□ -1.65
RPN7YPR108W TOR2P32600 2474 aaKnown RBP4.71□□□□□ -1.65
RPN7YPR108W CMC1P36064 111 aa4.71□□□□□ -1.66
RPN7YPR108W MIC12P38341 106 aa4.71□□□□□ -1.66
RPN7YPR108W YHR140WP38842 239 aa4.71□□□□□ -1.66
RPN7YPR108W GET2P40056 285 aa4.71□□□□□ -1.66
RPN7YPR108W PRE5P40302 234 aaKnown RBP4.71□□□□□ -1.66
RPN7YPR108W SNA4Q07549 140 aa4.71□□□□□ -1.66
RPN7YPR108W TIM18Q08749 192 aa4.71□□□□□ -1.66
RPN7YPR108W YOR352WQ08816 343 aa4.71□□□□□ -1.66
RPN7YPR108W PRM3Q08931 133 aa4.71□□□□□ -1.66
RPN7YPR108W RDL1Q12305 139 aaKnown RBP4.71□□□□□ -1.66
RPN7YPR108W MRPL31P14063 131 aaPredicted RBP4.7□□□□□ -1.66
RPN7YPR108W YPS1P32329 569 aa4.7□□□□□ -1.66
RPN7YPR108W YKL102CP34249 101 aa4.7□□□□□ -1.66
RPN7YPR108W GPP2P40106 250 aaKnown RBP4.7□□□□□ -1.66
RPN7YPR108W GZF3P42944 551 aaKnown RBP4.7□□□□□ -1.66
RPN7YPR108W YGR219WP53307 113 aa4.7□□□□□ -1.66
RPN7YPR108W RAV2Q03956 351 aa4.7□□□□□ -1.66
RPN7YPR108W SPG4Q04438 115 aa4.7□□□□□ -1.66
RPN7YPR108W SRL1Q08673 210 aa4.7□□□□□ -1.66
RPN7YPR108W YOR029WQ12243 111 aa4.7□□□□□ -1.66
RPN7YPR108W TIM22Q12328 207 aa4.7□□□□□ -1.66
RPN7YPR108W ATO3Q12359 275 aa4.7□□□□□ -1.66
RPN7YPR108W YFL068WP0CX99 160 aa4.69□□□□□ -1.66
RPN7YPR108W YLL066W-AP0CY00 160 aa4.69□□□□□ -1.66
RPN7YPR108W YLL067W-AP0CY01 160 aa4.69□□□□□ -1.66
RPN7YPR108W APS1P35181 156 aa4.69□□□□□ -1.66
RPN7YPR108W YFL015CP43578 164 aa4.69□□□□□ -1.66
RPN7YPR108W TOM7P53507 60 aa4.69□□□□□ -1.66
RPN7YPR108W TVP18Q04767 167 aa4.69□□□□□ -1.66
RPN7YPR108W YHR213WP0CI67 198 aa4.68□□□□□ -1.66
RPN7YPR108W RPL23AP0CX41 137 aaKnown RBP4.68□□□□□ -1.66
RPN7YPR108W RPL23BP0CX42 137 aaKnown RBP4.68□□□□□ -1.66
RPN7YPR108W LSM2P38203 95 aaKnown RBP4.68□□□□□ -1.66
RPN7YPR108W GAT2P40209 560 aa4.68□□□□□ -1.66
RPN7YPR108W YIL012WP40551 113 aa4.68□□□□□ -1.66
RPN7YPR108W DUO1P53168 247 aaKnown RBP4.68□□□□□ -1.66
RPN7YPR108W SDS23P53172 527 aa4.68□□□□□ -1.66
RPN7YPR108W GPI19Q04082 140 aa4.68□□□□□ -1.66
RPN7YPR108W HOR7Q05827 59 aa4.68□□□□□ -1.66
RPN7YPR108W TMC1Q08422 150 aaPredicted RBP4.68□□□□□ -1.66
RPN7YPR108W RPL27BP0C2H7 136 aaKnown RBP4.67□□□□□ -1.66
RPN7YPR108W SCM4P32564 187 aa4.67□□□□□ -1.66
RPN7YPR108W GRH1Q04410 372 aaKnown RBP4.67□□□□□ -1.66
RPN7YPR108W PBP4Q07362 185 aaKnown RBP4.67□□□□□ -1.66
RPN7YPR108W ERG27Q12452 347 aaKnown RBP4.67□□□□□ -1.66
RPN7YPR108W RPL31AP0C2H8 113 aaKnown RBP4.66□□□□□ -1.66
RPN7YPR108W RPB9P27999 122 aa4.66□□□□□ -1.66
RPN7YPR108W VMA11P32842 164 aa4.66□□□□□ -1.66
RPN7YPR108W YKR045CP36138 183 aa4.66□□□□□ -1.66
RPN7YPR108W PAM17P36147 197 aa4.66□□□□□ -1.66
RPN7YPR108W FYV4P38783 130 aaPredicted RBP4.66□□□□□ -1.66
RPN7YPR108W MRPL49P40858 161 aaPredicted RBP4.66□□□□□ -1.66
RPN7YPR108W HAC1P41546 238 aa4.66□□□□□ -1.66
RPN7YPR108W IMP2P46972 177 aa4.66□□□□□ -1.66
RPN7YPR108W TOS8P53147 276 aa4.66□□□□□ -1.66
RPN7YPR108W YMR317WQ04893 1140 aa4.66□□□□□ -1.66
RPN7YPR108W ATG39Q06159 398 aa4.66□□□□□ -1.66
RPN7YPR108W PAU23Q07987 124 aa4.66□□□□□ -1.66
RPN7YPR108W FSF1Q12029 327 aaKnown RBP4.66□□□□□ -1.66
RPN7YPR108W FCY1Q12178 158 aa4.66□□□□□ -1.66
RPN7YPR108W PAU17Q12370 124 aa4.66□□□□□ -1.66
RPN7YPR108W SEC4P07560 215 aaKnown RBP4.65□□□□□ -1.67
RPN7YPR108W RPL42AP0CX27 106 aaKnown RBP4.65□□□□□ -1.67
RPN7YPR108W RPL42BP0CX28 106 aaKnown RBP4.65□□□□□ -1.67
RPN7YPR108W YCR023CP25351 611 aa4.65□□□□□ -1.67
RPN7YPR108W INO2P26798 304 aa4.65□□□□□ -1.67
RPN7YPR108W UIP3P39547 235 aa4.65□□□□□ -1.67
RPN7YPR108W MSL1P40567 111 aaPredicted RBP4.65□□□□□ -1.67
RPN7YPR108W YCH1P42937 148 aa4.65□□□□□ -1.67
RPN7YPR108W VPS55P47111 140 aa4.65□□□□□ -1.67
RPN7YPR108W YDR366CP87287 132 aa4.65□□□□□ -1.67
RPN7YPR108W YBR126W-AQ8TGU7 68 aa4.65□□□□□ -1.67
RPN7YPR108W MRP49P32388 137 aa4.64□□□□□ -1.67
RPN7YPR108W GSP1P32835 219 aaKnown RBP4.64□□□□□ -1.67
RPN7YPR108W GSP2P32836 220 aaKnown RBP4.64□□□□□ -1.67
RPN7YPR108W YKL044WP36092 106 aa4.64□□□□□ -1.67
RPN7YPR108W YJL027CP47063 138 aaPredicted RBP4.64□□□□□ -1.67
RPN7YPR108W YIP3P53633 176 aa4.64□□□□□ -1.67
RPN7YPR108W YNL234WP53857 426 aa4.64□□□□□ -1.67
RPN7YPR108W DPP1Q05521 289 aa4.64□□□□□ -1.67
RPN7YPR108W YCR075W-AQ3E830 75 aa4.64□□□□□ -1.67
RPN7YPR108W YER134CP40081 178 aa4.63□□□□□ -1.67
RPN7YPR108W CDC40P40968 455 aaPredicted RBP4.63□□□□□ -1.67
RPN7YPR108W ALG13P53178 202 aa4.63□□□□□ -1.67
RPN7YPR108W SEN15Q04675 128 aa4.63□□□□□ -1.67
RPN7YPR108W CCW12Q12127 133 aa4.63□□□□□ -1.67
RPN7YPR108W TPT1Q12272 230 aaKnown RBP4.63□□□□□ -1.67
RPN7YPR108W YNL146C-AQ3E7Z1 64 aa4.63□□□□□ -1.67
RPN7YPR108W YCR024C-BQ3E7Z8 88 aa4.63□□□□□ -1.67
RPN7YPR108W YER145C-AA0A023PYF4 145 aa4.62□□□□□ -1.67
RPN7YPR108W RPL43AP0CX25 92 aaKnown RBP4.62□□□□□ -1.67
RPN7YPR108W RPL43BP0CX26 92 aa4.62□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms