RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W UTP11P34247 250 aaPredicted RBP0.37□□□□□ -2.35
YOP1YPR028W SFT2P38166 215 aa0.37□□□□□ -2.35
YOP1YPR028W EFM5P53200 248 aaKnown RBP0.37□□□□□ -2.35
YOP1YPR028W YPL067CQ02754 198 aa0.37□□□□□ -2.35
YOP1YPR028W YMR320WQ04897 101 aa0.37□□□□□ -2.35
YOP1YPR028W YOR385WQ08909 290 aa0.37□□□□□ -2.35
YOP1YPR028W PFY1P07274 126 aa0.36□□□□□ -2.35
YOP1YPR028W RPL40AP0CH08 128 aaKnown RBP0.36□□□□□ -2.35
YOP1YPR028W RPL40BP0CH09 128 aaKnown RBP0.36□□□□□ -2.35
YOP1YPR028W RPC19P28000 142 aaKnown RBP0.36□□□□□ -2.35
YOP1YPR028W RBL2P48606 106 aaKnown RBP0.36□□□□□ -2.35
YOP1YPR028W EMC4P53073 190 aa0.36□□□□□ -2.35
YOP1YPR028W YGL149WP53116 101 aa0.36□□□□□ -2.35
YOP1YPR028W YGR039WP53225 103 aa0.36□□□□□ -2.35
YOP1YPR028W HHO1P53551 258 aa0.36□□□□□ -2.35
YOP1YPR028W COF1Q03048 143 aaKnown RBP0.36□□□□□ -2.35
YOP1YPR028W YMR321CQ04898 105 aa0.36□□□□□ -2.35
YOP1YPR028W FIT3Q08907 204 aa0.36□□□□□ -2.35
YOP1YPR028W HUG1Q6Q5K6 68 aa0.36□□□□□ -2.35
YOP1YPR028W YLR157W-EP0CF00 54 aa0.35□□□□□ -2.35
YOP1YPR028W RPS1AP33442 255 aaKnown RBP0.35□□□□□ -2.35
YOP1YPR028W MRPL11P36521 249 aaPredicted RBP0.35□□□□□ -2.35
YOP1YPR028W BRP1P53194 125 aa0.35□□□□□ -2.35
YOP1YPR028W YOR034C-AQ3E735 80 aa0.35□□□□□ -2.35
YOP1YPR028W HAP3P13434 144 aa0.34□□□□□ -2.36
YOP1YPR028W QCR10P37299 77 aa0.34□□□□□ -2.36
YOP1YPR028W YBR013CP38215 129 aa0.34□□□□□ -2.36
YOP1YPR028W YAP3P38749 330 aa0.34□□□□□ -2.36
YOP1YPR028W MIC27P50945 234 aa0.34□□□□□ -2.36
YOP1YPR028W YLR296WQ05898 108 aa0.34□□□□□ -2.36
YOP1YPR028W SPC3Q12133 184 aa0.34□□□□□ -2.36
YOP1YPR028W MED11Q99278 115 aa0.34□□□□□ -2.36
YOP1YPR028W HFA1P32874 2273 aa0.33□□□□□ -2.36
YOP1YPR028W QCR6P00127 147 aa0.33□□□□□ -2.36
YOP1YPR028W YSF3P0C074 85 aaPredicted RBP0.33□□□□□ -2.36
YOP1YPR028W AIM4P38305 123 aaPredicted RBP0.33□□□□□ -2.36
YOP1YPR028W SDH7Q04401 133 aa0.33□□□□□ -2.36
YOP1YPR028W LDB18Q07887 179 aa0.33□□□□□ -2.36
YOP1YPR028W ATP14Q12349 124 aa0.33□□□□□ -2.36
YOP1YPR028W HSP10P38910 106 aa0.32□□□□□ -2.36
YOP1YPR028W GTT2Q12390 233 aa0.32□□□□□ -2.36
YOP1YPR028W RTC6O14464 93 aa0.31□□□□□ -2.36
YOP1YPR028W PAU21P0CE86 164 aa0.31□□□□□ -2.36
YOP1YPR028W PAU22P0CE87 164 aa0.31□□□□□ -2.36
YOP1YPR028W MRPL31P14063 131 aaPredicted RBP0.31□□□□□ -2.36
YOP1YPR028W YCR050CP25630 102 aa0.31□□□□□ -2.36
YOP1YPR028W GSP1P32835 219 aaKnown RBP0.31□□□□□ -2.36
YOP1YPR028W PRS3P38689 320 aaKnown RBP0.31□□□□□ -2.36
YOP1YPR028W AIM18P38884 321 aa0.31□□□□□ -2.36
YOP1YPR028W HPM1P40481 377 aa0.31□□□□□ -2.36
YOP1YPR028W ELC1Q03071 99 aa0.31□□□□□ -2.36
YOP1YPR028W SNT2P53127 1403 aa0.3□□□□□ -2.36
YOP1YPR028W RPL14AP36105 138 aaKnown RBP0.3□□□□□ -2.36
YOP1YPR028W RPL14BP38754 138 aaKnown RBP0.3□□□□□ -2.36
YOP1YPR028W YAL064WP39711 94 aa0.3□□□□□ -2.36
YOP1YPR028W FCF2Q12035 217 aaPredicted RBP0.3□□□□□ -2.36
YOP1YPR028W RPL36BO14455 100 aaKnown RBP0.29□□□□□ -2.36
YOP1YPR028W RPL36AP05745 100 aaPredicted RBP0.29□□□□□ -2.36
YOP1YPR028W POR2P40478 281 aa0.29□□□□□ -2.36
YOP1YPR028W MPC1P53157 130 aaKnown RBP0.29□□□□□ -2.36
YOP1YPR028W YGR017WP53210 297 aa0.29□□□□□ -2.36
YOP1YPR028W CSN9Q03981 162 aa0.29□□□□□ -2.36
YOP1YPR028W YLR194CQ05777 254 aa0.29□□□□□ -2.36
YOP1YPR028W EMP24P32803 203 aaKnown RBP0.28□□□□□ -2.36
YOP1YPR028W SRX1P36077 127 aa0.28□□□□□ -2.36
YOP1YPR028W TVP18Q04767 167 aa0.28□□□□□ -2.36
YOP1YPR028W UBR1P19812 1950 aa0.28□□□□□ -2.36
YOP1YPR028W CDC39P25655 2108 aaKnown RBP0.28□□□□□ -2.37
YOP1YPR028W GIM4P40005 111 aaKnown RBP0.27□□□□□ -2.37
YOP1YPR028W YIL163CP40448 117 aa0.27□□□□□ -2.37
YOP1YPR028W PHS1P40857 217 aa0.27□□□□□ -2.37
YOP1YPR028W YJR128WP47162 119 aa0.27□□□□□ -2.37
YOP1YPR028W YNL277W-AQ3E7Z0 62 aa0.27□□□□□ -2.37
YOP1YPR028W ERV14P53173 138 aa0.26□□□□□ -2.37
YOP1YPR028W HPA2Q06592 156 aa0.26□□□□□ -2.37
YOP1YPR028W SUA7P29055 345 aaPredicted RBP0.25□□□□□ -2.37
YOP1YPR028W HYM1P32464 399 aa0.25□□□□□ -2.37
YOP1YPR028W RPS29BP41058 56 aaKnown RBP0.25□□□□□ -2.37
YOP1YPR028W ICS3P47034 131 aa0.25□□□□□ -2.37
YOP1YPR028W ENV10Q99382 181 aa0.25□□□□□ -2.37
YOP1YPR028W Q0144Q9ZZW2 109 aa0.25□□□□□ -2.37
YOP1YPR028W SEC59P20048 519 aa0.24□□□□□ -2.37
YOP1YPR028W TRS20P38334 175 aa0.24□□□□□ -2.37
YOP1YPR028W RPS20P38701 121 aaKnown RBP0.24□□□□□ -2.37
YOP1YPR028W CYC2P38909 366 aa0.24□□□□□ -2.37
YOP1YPR028W ARL3Q02804 198 aa0.24□□□□□ -2.37
YOP1YPR028W YDR278CQ05612 105 aa0.24□□□□□ -2.37
YOP1YPR028W CNL1Q06333 122 aa0.24□□□□□ -2.37
YOP1YPR028W OCA6Q12454 224 aa0.24□□□□□ -2.37
YOP1YPR028W RPL22AP05749 121 aaKnown RBP0.23□□□□□ -2.37
YOP1YPR028W YFR035CP43608 114 aa0.23□□□□□ -2.37
YOP1YPR028W YGR240C-AQ3E786 66 aa0.23□□□□□ -2.37
YOP1YPR028W TRM732Q03496 1420 aa0.22□□□□□ -2.37
YOP1YPR028W YKL044WP36092 106 aa0.22□□□□□ -2.37
YOP1YPR028W GAT4P40569 121 aa0.22□□□□□ -2.37
YOP1YPR028W SFT1P43682 97 aa0.22□□□□□ -2.37
YOP1YPR028W SAE3P89114 91 aa0.22□□□□□ -2.37
YOP1YPR028W YGL041C-BQ3E750 60 aa0.22□□□□□ -2.37
YOP1YPR028W YJL197C-AP0C5P0 93 aa0.21□□□□□ -2.38
YOP1YPR028W AUA1P32450 94 aa0.21□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms