RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W RPL40BP0CH09 128 aaKnown RBP1.37□□□□□ -2.19
VPS28YPL065W NMT1P14743 455 aa1.37□□□□□ -2.19
VPS28YPL065W FUN14P18411 198 aa1.37□□□□□ -2.19
VPS28YPL065W SFT2P38166 215 aa1.37□□□□□ -2.19
VPS28YPL065W HPM1P40481 377 aa1.37□□□□□ -2.19
VPS28YPL065W IRC21Q04772 201 aa1.37□□□□□ -2.19
VPS28YPL065W YHR213WP0CI67 198 aa1.36□□□□□ -2.19
VPS28YPL065W TRS20P38334 175 aa1.36□□□□□ -2.19
VPS28YPL065W BRP1P53194 125 aa1.36□□□□□ -2.19
VPS28YPL065W YPL067CQ02754 198 aa1.36□□□□□ -2.19
VPS28YPL065W RPC19P28000 142 aaKnown RBP1.35□□□□□ -2.19
VPS28YPL065W YJL009WP47078 108 aa1.35□□□□□ -2.19
VPS28YPL065W YCR050CP25630 102 aa1.34□□□□□ -2.19
VPS28YPL065W RPL14AP36105 138 aaKnown RBP1.34□□□□□ -2.19
VPS28YPL065W QCR10P37299 77 aa1.34□□□□□ -2.19
VPS28YPL065W RPL14BP38754 138 aaKnown RBP1.34□□□□□ -2.19
VPS28YPL065W ANB1P19211 157 aa1.33□□□□□ -2.2
VPS28YPL065W MRPL44P19956 98 aa1.33□□□□□ -2.2
VPS28YPL065W COA4Q05809 96 aa1.33□□□□□ -2.2
VPS28YPL065W YAL064WP39711 94 aa1.32□□□□□ -2.2
VPS28YPL065W YGL149WP53116 101 aa1.32□□□□□ -2.2
VPS28YPL065W GSC2P40989 1895 aa1.31□□□□□ -2.2
VPS28YPL065W AIM4P38305 123 aaPredicted RBP1.31□□□□□ -2.2
VPS28YPL065W CYC2P38909 366 aa1.31□□□□□ -2.2
VPS28YPL065W CSN9Q03981 162 aa1.31□□□□□ -2.2
VPS28YPL065W UTP11P34247 250 aaPredicted RBP1.3□□□□□ -2.2
VPS28YPL065W ELC1Q03071 99 aa1.29□□□□□ -2.2
VPS28YPL065W RTC6O14464 93 aa1.28□□□□□ -2.2
VPS28YPL065W YMR141CP40211 102 aa1.28□□□□□ -2.2
VPS28YPL065W KTI11Q3E840 82 aa1.28□□□□□ -2.2
VPS28YPL065W SDH7Q04401 133 aa1.27□□□□□ -2.21
VPS28YPL065W TVP18Q04767 167 aa1.27□□□□□ -2.21
VPS28YPL065W YLR296WQ05898 108 aa1.27□□□□□ -2.21
VPS28YPL065W MRPL11P36521 249 aaPredicted RBP1.26□□□□□ -2.21
VPS28YPL065W YNL277W-AQ3E7Z0 62 aa1.26□□□□□ -2.21
VPS28YPL065W PFY1P07274 126 aa1.25□□□□□ -2.21
VPS28YPL065W FIT3Q08907 204 aa1.25□□□□□ -2.21
VPS28YPL065W GTT2Q12390 233 aa1.25□□□□□ -2.21
VPS28YPL065W PAU21P0CE86 164 aa1.24□□□□□ -2.21
VPS28YPL065W PAU22P0CE87 164 aa1.24□□□□□ -2.21
VPS28YPL065W PHS1P40857 217 aa1.24□□□□□ -2.21
VPS28YPL065W MVB12P42939 101 aa1.23□□□□□ -2.21
VPS28YPL065W HAP3P13434 144 aa1.22□□□□□ -2.21
VPS28YPL065W RPS20P38701 121 aaKnown RBP1.22□□□□□ -2.21
VPS28YPL065W AIM18P38884 321 aa1.22□□□□□ -2.21
VPS28YPL065W HSP10P38910 106 aa1.22□□□□□ -2.21
VPS28YPL065W GIM4P40005 111 aaKnown RBP1.22□□□□□ -2.21
VPS28YPL065W YGL204CP53089 101 aa1.22□□□□□ -2.21
VPS28YPL065W YDR278CQ05612 105 aa1.22□□□□□ -2.21
VPS28YPL065W YLR361C-AQ3E795 98 aa1.22□□□□□ -2.21
VPS28YPL065W COA6Q3E846 104 aa1.22□□□□□ -2.21
VPS28YPL065W HUG1Q6Q5K6 68 aa1.22□□□□□ -2.21
VPS28YPL065W YSF3P0C074 85 aaPredicted RBP1.21□□□□□ -2.22
VPS28YPL065W HYM1P32464 399 aa1.21□□□□□ -2.22
VPS28YPL065W YBR013CP38215 129 aa1.21□□□□□ -2.22
VPS28YPL065W PRS3P38689 320 aaKnown RBP1.21□□□□□ -2.22
VPS28YPL065W MIC27P50945 234 aa1.21□□□□□ -2.22
VPS28YPL065W YGR017WP53210 297 aa1.21□□□□□ -2.22
VPS28YPL065W RPL43AP0CX25 92 aaKnown RBP1.2□□□□□ -2.22
VPS28YPL065W RPL43BP0CX26 92 aa1.2□□□□□ -2.22
VPS28YPL065W SUA7P29055 345 aaPredicted RBP1.2□□□□□ -2.22
VPS28YPL065W TIM8P57744 87 aa1.2□□□□□ -2.22
VPS28YPL065W LAA1P39526 2014 aa1.2□□□□□ -2.22
VPS28YPL065W SNT2P53127 1403 aa1.19□□□□□ -2.22
VPS28YPL065W SFT1P43682 97 aa1.18□□□□□ -2.22
VPS28YPL065W YGR042WP53227 271 aa1.18□□□□□ -2.22
VPS28YPL065W GSP1P32835 219 aaKnown RBP1.17□□□□□ -2.22
VPS28YPL065W PRP8P33334 2413 aaKnown RBP1.17□□□□□ -2.22
VPS28YPL065W GAT4P40569 121 aa1.16□□□□□ -2.22
VPS28YPL065W YLR307C-AQ3E825 87 aa1.16□□□□□ -2.22
VPS28YPL065W CNL1Q06333 122 aa1.15□□□□□ -2.23
VPS28YPL065W LDB18Q07887 179 aa1.15□□□□□ -2.23
VPS28YPL065W ATP14Q12349 124 aa1.15□□□□□ -2.23
VPS28YPL065W YOR034C-AQ3E735 80 aa1.15□□□□□ -2.23
VPS28YPL065W Q0144Q9ZZW2 109 aa1.14□□□□□ -2.23
VPS28YPL065W TY4B-JP47024 1803 aa1.14□□□□□ -2.23
VPS28YPL065W ACP1P32463 125 aa1.13□□□□□ -2.23
VPS28YPL065W MPC1P53157 130 aaKnown RBP1.13□□□□□ -2.23
VPS28YPL065W RPL36BO14455 100 aaKnown RBP1.12□□□□□ -2.23
VPS28YPL065W RPL36AP05745 100 aaPredicted RBP1.12□□□□□ -2.23
VPS28YPL065W YLR157W-EP0CF00 54 aa1.12□□□□□ -2.23
VPS28YPL065W FCF2Q12035 217 aaPredicted RBP1.12□□□□□ -2.23
VPS28YPL065W ERV14P53173 138 aa1.11□□□□□ -2.23
VPS28YPL065W SPC2Q04969 178 aa1.11□□□□□ -2.23
VPS28YPL065W YLR194CQ05777 254 aa1.1□□□□□ -2.23
VPS28YPL065W URA2P07259 2214 aaKnown RBP1.09□□□□□ -2.23
VPS28YPL065W SEC59P20048 519 aa1.09□□□□□ -2.23
VPS28YPL065W YIL163CP40448 117 aa1.09□□□□□ -2.23
VPS28YPL065W YMR321CQ04898 105 aa1.09□□□□□ -2.23
VPS28YPL065W MED11Q99278 115 aa1.09□□□□□ -2.23
VPS28YPL065W TRM732Q03496 1420 aa1.08□□□□□ -2.24
VPS28YPL065W MRPL31P14063 131 aaPredicted RBP1.08□□□□□ -2.24
VPS28YPL065W DYN2Q02647 92 aa1.08□□□□□ -2.24
VPS28YPL065W YOR376W-AQ3E805 51 aa1.08□□□□□ -2.24
VPS28YPL065W YKL044WP36092 106 aa1.06□□□□□ -2.24
VPS28YPL065W POP7P38291 140 aa1.05□□□□□ -2.24
VPS28YPL065W HPA2Q06592 156 aa1.05□□□□□ -2.24
VPS28YPL065W YRF1-3P0CX14 1859 aa1.04□□□□□ -2.24
VPS28YPL065W YRF1-7P0CX15 1859 aa1.04□□□□□ -2.24
VPS28YPL065W SAE3P89114 91 aa1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms