RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeastyeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHL1YPL008W YGL118CP53132 145 aa3.24□□□□□ -1.89
CHL1YPL008W HFA1P32874 2273 aa3.24□□□□□ -1.89
CHL1YPL008W SOD1P00445 154 aaKnown RBP3.24□□□□□ -1.89
CHL1YPL008W POR1P04840 283 aaKnown RBP3.24□□□□□ -1.89
CHL1YPL008W ATP5P09457 212 aa3.24□□□□□ -1.89
CHL1YPL008W CTR2P38865 189 aa3.24□□□□□ -1.89
CHL1YPL008W PAU7P39545 55 aa3.24□□□□□ -1.89
CHL1YPL008W YNL194CP40169 301 aa3.24□□□□□ -1.89
CHL1YPL008W GEP5Q12393 293 aa3.24□□□□□ -1.89
CHL1YPL008W YDL085C-AQ3E7B7 68 aaKnown RBP3.24□□□□□ -1.89
CHL1YPL008W FUN14P18411 198 aa3.23□□□□□ -1.89
CHL1YPL008W MIX23P38162 196 aa3.23□□□□□ -1.89
CHL1YPL008W RPA43P46669 326 aa3.23□□□□□ -1.89
CHL1YPL008W YDL186WP48568 277 aa3.23□□□□□ -1.89
CHL1YPL008W YGR017WP53210 297 aa3.23□□□□□ -1.89
CHL1YPL008W SAE3P89114 91 aa3.23□□□□□ -1.89
CHL1YPL008W UPS3Q04006 179 aa3.23□□□□□ -1.89
CHL1YPL008W YCL048W-AQ2V2Q2 79 aa3.23□□□□□ -1.89
CHL1YPL008W YCR007CP25354 239 aa3.23□□□□□ -1.89
CHL1YPL008W YPS1P32329 569 aa3.23□□□□□ -1.89
CHL1YPL008W SCM4P32564 187 aa3.23□□□□□ -1.89
CHL1YPL008W UGX2P32772 223 aa3.23□□□□□ -1.89
CHL1YPL008W PHD1P36093 366 aa3.23□□□□□ -1.89
CHL1YPL008W OXA1P39952 402 aa3.23□□□□□ -1.89
CHL1YPL008W YIL163CP40448 117 aa3.23□□□□□ -1.89
CHL1YPL008W DPP1Q05521 289 aa3.23□□□□□ -1.89
CHL1YPL008W YIL134C-AQ45U18 67 aa3.23□□□□□ -1.89
CHL1YPL008W MDM10P18409 493 aa3.22□□□□□ -1.89
CHL1YPL008W PAU16P35994 123 aa3.22□□□□□ -1.89
CHL1YPL008W PRS4P38063 326 aaPredicted RBP3.22□□□□□ -1.89
CHL1YPL008W DUG3P53871 357 aa3.22□□□□□ -1.89
CHL1YPL008W AYT1Q12226 474 aa3.22□□□□□ -1.89
CHL1YPL008W ADH2P00331 348 aaKnown RBP3.22□□□□□ -1.89
CHL1YPL008W TIR2P33890 251 aa3.22□□□□□ -1.89
CHL1YPL008W DAD1Q12248 94 aa3.22□□□□□ -1.89
CHL1YPL008W JID1Q12350 301 aa3.22□□□□□ -1.89
CHL1YPL008W YLR342W-AQ3E810 57 aa3.22□□□□□ -1.89
CHL1YPL008W NUM1Q00402 2748 aa3.22□□□□□ -1.89
CHL1YPL008W CUP2P15315 225 aa3.21□□□□□ -1.9
CHL1YPL008W MRPL38P35996 138 aaPredicted RBP3.21□□□□□ -1.9
CHL1YPL008W UBC7Q02159 165 aa3.21□□□□□ -1.9
CHL1YPL008W IZH1Q03419 316 aa3.21□□□□□ -1.9
CHL1YPL008W RAV2Q03956 351 aa3.21□□□□□ -1.9
CHL1YPL008W HTL1Q9URQ5 78 aa3.21□□□□□ -1.9
CHL1YPL008W SEN1Q00416 2231 aaKnown RBP3.21□□□□□ -1.9
CHL1YPL008W RPS28BP0C0X0 67 aaKnown RBP3.21□□□□□ -1.9
CHL1YPL008W YBR121C-AP0C5L4 52 aa3.21□□□□□ -1.9
CHL1YPL008W YHR213WP0CI67 198 aa3.21□□□□□ -1.9
CHL1YPL008W TEM1P38987 245 aa3.21□□□□□ -1.9
CHL1YPL008W POR2P40478 281 aa3.21□□□□□ -1.9
CHL1YPL008W YJL213WP40896 331 aa3.21□□□□□ -1.9
CHL1YPL008W YFR045WP43617 309 aa3.21□□□□□ -1.9
CHL1YPL008W NCA3P46955 337 aa3.21□□□□□ -1.9
CHL1YPL008W YMR166CQ03829 368 aa3.21□□□□□ -1.9
CHL1YPL008W CSI2Q08054 341 aa3.21□□□□□ -1.9
CHL1YPL008W RPS28AQ3E7X9 67 aaPredicted RBP3.21□□□□□ -1.9
CHL1YPL008W SEC16P48415 2195 aaKnown RBP3.2□□□□□ -1.9
CHL1YPL008W MRPL31P14063 131 aaPredicted RBP3.2□□□□□ -1.9
CHL1YPL008W CPT1P17898 393 aa3.2□□□□□ -1.9
CHL1YPL008W YKR045CP36138 183 aa3.2□□□□□ -1.9
CHL1YPL008W YIR020CP40575 100 aa3.2□□□□□ -1.9
CHL1YPL008W SWT21P53873 357 aaPredicted RBP3.2□□□□□ -1.9
CHL1YPL008W TIM18Q08749 192 aa3.2□□□□□ -1.9
CHL1YPL008W ACC1Q00955 2233 aaKnown RBP3.2□□□□□ -1.9
CHL1YPL008W LSM2P38203 95 aaKnown RBP3.2□□□□□ -1.9
CHL1YPL008W YCH1P42937 148 aa3.2□□□□□ -1.9
CHL1YPL008W IMP2P46972 177 aa3.2□□□□□ -1.9
CHL1YPL008W TDA4P47153 279 aa3.2□□□□□ -1.9
CHL1YPL008W YGR219WP53307 113 aa3.2□□□□□ -1.9
CHL1YPL008W SEN15Q04675 128 aa3.2□□□□□ -1.9
CHL1YPL008W YLR050CQ12155 161 aaKnown RBP3.2□□□□□ -1.9
CHL1YPL008W ATO3Q12359 275 aa3.2□□□□□ -1.9
CHL1YPL008W SPS100P13130 326 aa3.19□□□□□ -1.9
CHL1YPL008W ZRT1P32804 376 aa3.19□□□□□ -1.9
CHL1YPL008W PRE5P40302 234 aaKnown RBP3.19□□□□□ -1.9
CHL1YPL008W YNL184CP53876 108 aa3.19□□□□□ -1.9
CHL1YPL008W DAD4P69851 72 aa3.19□□□□□ -1.9
CHL1YPL008W RDL1Q12305 139 aaKnown RBP3.19□□□□□ -1.9
CHL1YPL008W YCR024C-BQ3E7Z8 88 aa3.19□□□□□ -1.9
CHL1YPL008W FYV4P38783 130 aaPredicted RBP3.19□□□□□ -1.9
CHL1YPL008W SNF11P38956 169 aa3.19□□□□□ -1.9
CHL1YPL008W GLC8P41818 229 aa3.19□□□□□ -1.9
CHL1YPL008W TOM7P53507 60 aa3.19□□□□□ -1.9
CHL1YPL008W YPL162CQ12042 273 aa3.19□□□□□ -1.9
CHL1YPL008W RPL31AP0C2H8 113 aaKnown RBP3.18□□□□□ -1.9
CHL1YPL008W RPL18AP0CX49 186 aaKnown RBP3.18□□□□□ -1.9
CHL1YPL008W RPL18BP0CX50 186 aaKnown RBP3.18□□□□□ -1.9
CHL1YPL008W PAM17P36147 197 aa3.18□□□□□ -1.9
CHL1YPL008W YJL027CP47063 138 aaPredicted RBP3.18□□□□□ -1.9
CHL1YPL008W YNL234WP53857 426 aa3.18□□□□□ -1.9
CHL1YPL008W YFL068WP0CX99 160 aa3.18□□□□□ -1.9
CHL1YPL008W YLL066W-AP0CY00 160 aa3.18□□□□□ -1.9
CHL1YPL008W YLL067W-AP0CY01 160 aa3.18□□□□□ -1.9
CHL1YPL008W YPI1P43587 155 aa3.18□□□□□ -1.9
CHL1YPL008W PAU23Q07987 124 aa3.18□□□□□ -1.9
CHL1YPL008W PAU17Q12370 124 aa3.18□□□□□ -1.9
CHL1YPL008W SLO1Q3E784 85 aa3.18□□□□□ -1.9
CHL1YPL008W SEC4P07560 215 aaKnown RBP3.17□□□□□ -1.9
CHL1YPL008W YER134CP40081 178 aa3.17□□□□□ -1.9
CHL1YPL008W SDS23P53172 527 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms