RNA–Protein interactions for RNA: YPL003W

ULA1, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene ULA1, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ULA1	YPL003W	IZH1	Q03419	316 aa		4.15	□□□□□ -1.74
ULA1	YPL003W	GIM5	Q04493	163 aa		4.15	□□□□□ -1.74
ULA1	YPL003W	DAD1	Q12248	94 aa		4.15	□□□□□ -1.74
ULA1	YPL003W	NUM1	Q00402	2748 aa		4.15	□□□□□ -1.75
ULA1	YPL003W	YBR090C	P38253	122 aa		4.14	□□□□□ -1.75
ULA1	YPL003W	HUA1	P40325	198 aa		4.14	□□□□□ -1.75
ULA1	YPL003W	AIM24	P47127	394 aa		4.14	□□□□□ -1.75
ULA1	YPL003W	DXO1	Q06349	442 aa		4.14	□□□□□ -1.75
ULA1	YPL003W	PRM3	Q08931	133 aa		4.14	□□□□□ -1.75
ULA1	YPL003W	UTP23	Q12339	254 aa	Known RBP	4.14	□□□□□ -1.75
ULA1	YPL003W	CMC1	P36064	111 aa		4.14	□□□□□ -1.75
ULA1	YPL003W	MRPL28	P36527	147 aa		4.14	□□□□□ -1.75
ULA1	YPL003W	YCR041W	P37265	110 aa		4.14	□□□□□ -1.75
ULA1	YPL003W	MIX23	P38162	196 aa		4.14	□□□□□ -1.75
ULA1	YPL003W	RPB11	P38902	120 aa		4.14	□□□□□ -1.75
ULA1	YPL003W	YFR045W	P43617	309 aa		4.14	□□□□□ -1.75
ULA1	YPL003W	YMR181C	Q03231	154 aa		4.14	□□□□□ -1.75
ULA1	YPL003W	YOL160W	Q08321	113 aa		4.14	□□□□□ -1.75
ULA1	YPL003W	GEP3	Q08622	556 aa		4.14	□□□□□ -1.75
ULA1	YPL003W	YOR097C	Q12274	175 aa	Predicted RBP	4.14	□□□□□ -1.75
ULA1	YPL003W	ERG27	Q12452	347 aa	Known RBP	4.14	□□□□□ -1.75
ULA1	YPL003W	MRPL23	Q12487	163 aa	Predicted RBP	4.14	□□□□□ -1.75
ULA1	YPL003W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.14	□□□□□ -1.75
ULA1	YPL003W	CUP2	P15315	225 aa		4.13	□□□□□ -1.75
ULA1	YPL003W	FZF1	P32805	299 aa		4.13	□□□□□ -1.75
ULA1	YPL003W	SSS1	P35179	80 aa		4.13	□□□□□ -1.75
ULA1	YPL003W	UPS3	Q04006	179 aa		4.13	□□□□□ -1.75
ULA1	YPL003W	IZH3	Q07959	543 aa		4.13	□□□□□ -1.75
ULA1	YPL003W	POM33	Q12164	279 aa		4.13	□□□□□ -1.75
ULA1	YPL003W	YLR342W-A	Q3E810	57 aa		4.13	□□□□□ -1.75
ULA1	YPL003W	POR1	P04840	283 aa	Known RBP	4.12	□□□□□ -1.75
ULA1	YPL003W	RPL12A	P0CX53	165 aa	Known RBP	4.12	□□□□□ -1.75
ULA1	YPL003W	RPL12B	P0CX54	165 aa		4.12	□□□□□ -1.75
ULA1	YPL003W	MRPL31	P14063	131 aa	Predicted RBP	4.12	□□□□□ -1.75
ULA1	YPL003W	CPT1	P17898	393 aa		4.12	□□□□□ -1.75
ULA1	YPL003W	SDH8	P38345	138 aa		4.12	□□□□□ -1.75
ULA1	YPL003W	YGR149W	P48236	432 aa		4.12	□□□□□ -1.75
ULA1	YPL003W	CYT2	Q00873	224 aa		4.12	□□□□□ -1.75
ULA1	YPL003W	CUE4	Q04201	117 aa	Predicted RBP	4.12	□□□□□ -1.75
ULA1	YPL003W	RRG8	Q06109	277 aa		4.12	□□□□□ -1.75
ULA1	YPL003W	ATG39	Q06159	398 aa		4.12	□□□□□ -1.75
ULA1	YPL003W	CSM4	Q08955	156 aa		4.12	□□□□□ -1.75
ULA1	YPL003W	YBR126W-A	Q8TGU7	68 aa		4.12	□□□□□ -1.75
ULA1	YPL003W	PRY2	P36110	329 aa		4.11	□□□□□ -1.75
ULA1	YPL003W	PAM17	P36147	197 aa		4.11	□□□□□ -1.75
ULA1	YPL003W	PAU7	P39545	55 aa		4.11	□□□□□ -1.75
ULA1	YPL003W	YMR141C	P40211	102 aa		4.11	□□□□□ -1.75
ULA1	YPL003W	LCB3	P47013	409 aa		4.11	□□□□□ -1.75
ULA1	YPL003W	COX16	P47081	118 aa		4.11	□□□□□ -1.75
ULA1	YPL003W	DUO1	P53168	247 aa	Known RBP	4.11	□□□□□ -1.75
ULA1	YPL003W	DUG3	P53871	357 aa		4.11	□□□□□ -1.75
ULA1	YPL003W	YPL162C	Q12042	273 aa		4.11	□□□□□ -1.75
ULA1	YPL003W	YPR063C	Q12160	140 aa		4.11	□□□□□ -1.75
ULA1	YPL003W	YER190C-B	P0CX94	160 aa		4.1	□□□□□ -1.75
ULA1	YPL003W	YEL077W-A	P0CX95	160 aa		4.1	□□□□□ -1.75
ULA1	YPL003W	YGR296C-B	P0CX96	160 aa		4.1	□□□□□ -1.75
ULA1	YPL003W	YPL283W-B	P0CX97	160 aa		4.1	□□□□□ -1.75
ULA1	YPL003W	YPR204C-A	P0CX98	160 aa		4.1	□□□□□ -1.75
ULA1	YPL003W	YFL068W	P0CX99	160 aa		4.1	□□□□□ -1.75
ULA1	YPL003W	YLL066W-A	P0CY00	160 aa		4.1	□□□□□ -1.75
ULA1	YPL003W	YLL067W-A	P0CY01	160 aa		4.1	□□□□□ -1.75
ULA1	YPL003W	MDM10	P18409	493 aa		4.1	□□□□□ -1.75
ULA1	YPL003W	YDL186W	P48568	277 aa		4.1	□□□□□ -1.75
ULA1	YPL003W	CGR1	P53188	120 aa		4.1	□□□□□ -1.75
ULA1	YPL003W	YIP3	P53633	176 aa		4.1	□□□□□ -1.75
ULA1	YPL003W	YPR013C	Q12145	317 aa		4.1	□□□□□ -1.75
ULA1	YPL003W	COA6	Q3E846	104 aa		4.1	□□□□□ -1.75
ULA1	YPL003W	VMA16	P23968	213 aa		4.09	□□□□□ -1.75
ULA1	YPL003W	PRE5	P40302	234 aa	Known RBP	4.09	□□□□□ -1.75
ULA1	YPL003W	FIP1	P45976	327 aa		4.09	□□□□□ -1.75
ULA1	YPL003W	TDA4	P47153	279 aa		4.09	□□□□□ -1.75
ULA1	YPL003W	UBC11	P52492	156 aa		4.09	□□□□□ -1.75
ULA1	YPL003W	THG1	P53215	237 aa	Known RBP	4.09	□□□□□ -1.75
ULA1	YPL003W	CAX4	P53223	239 aa		4.09	□□□□□ -1.75
ULA1	YPL003W	TIM22	Q12328	207 aa		4.09	□□□□□ -1.75
ULA1	YPL003W	YNL146C-A	Q3E7Z1	64 aa		4.09	□□□□□ -1.75
ULA1	YPL003W	YOR011W-A	Q3E807	68 aa		4.09	□□□□□ -1.75
ULA1	YPL003W	RPL27A	P0C2H6	136 aa	Known RBP	4.08	□□□□□ -1.76
ULA1	YPL003W	MST28	P39552	234 aa		4.08	□□□□□ -1.76
ULA1	YPL003W	SPI1	P40092	148 aa		4.08	□□□□□ -1.76
ULA1	YPL003W	RPA43	P46669	326 aa		4.08	□□□□□ -1.76
ULA1	YPL003W	SDS23	P53172	527 aa		4.08	□□□□□ -1.76
ULA1	YPL003W	MST27	P53176	234 aa		4.08	□□□□□ -1.76
ULA1	YPL003W	DIA1	P54005	336 aa		4.08	□□□□□ -1.76
ULA1	YPL003W	MSA1	Q08471	629 aa		4.08	□□□□□ -1.76
ULA1	YPL003W	CCW12	Q12127	133 aa		4.08	□□□□□ -1.76
ULA1	YPL003W	WIP1	Q2V2P8	89 aa		4.08	□□□□□ -1.76
ULA1	YPL003W	YCR024C-B	Q3E7Z8	88 aa		4.08	□□□□□ -1.76
ULA1	YPL003W	YGR035W-A	Q45U48	73 aa		4.08	□□□□□ -1.76
ULA1	YPL003W	YHR212W-A	P0CX91	67 aa		4.07	□□□□□ -1.76
ULA1	YPL003W	UTR5	P32630	166 aa		4.07	□□□□□ -1.76
ULA1	YPL003W	ZRT1	P32804	376 aa		4.07	□□□□□ -1.76
ULA1	YPL003W	YHR140W	P38842	239 aa		4.07	□□□□□ -1.76
ULA1	YPL003W	MRPL49	P40858	161 aa	Predicted RBP	4.07	□□□□□ -1.76
ULA1	YPL003W	LSM8	P47093	109 aa	Known RBP	4.07	□□□□□ -1.76
ULA1	YPL003W	YGL118C	P53132	145 aa		4.07	□□□□□ -1.76
ULA1	YPL003W	GTO3	Q04806	366 aa		4.07	□□□□□ -1.76
ULA1	YPL003W	ARC18	Q05933	178 aa	Known RBP	4.07	□□□□□ -1.76
ULA1	YPL003W	PRM7	Q12459	698 aa		4.07	□□□□□ -1.76
ULA1	YPL003W	SEC4	P07560	215 aa	Known RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms