RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C MRPS9P38120 278 aa2.26□□□□□ -2.05
HRD1YOL013C YEL073CP39974 107 aa2.26□□□□□ -2.05
HRD1YOL013C RPL33BP41056 107 aaKnown RBP2.26□□□□□ -2.05
HRD1YOL013C EMC4P53073 190 aa2.26□□□□□ -2.05
HRD1YOL013C TMA23Q03525 211 aa2.26□□□□□ -2.05
HRD1YOL013C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
HRD1YOL013C CSI2Q08054 341 aa2.26□□□□□ -2.05
HRD1YOL013C UBR1P19812 1950 aa2.26□□□□□ -2.05
HRD1YOL013C KRE1P17260 313 aa2.25□□□□□ -2.05
HRD1YOL013C SCM4P32564 187 aa2.25□□□□□ -2.05
HRD1YOL013C BOL2P53082 120 aa2.25□□□□□ -2.05
HRD1YOL013C RNH202Q05635 350 aa2.25□□□□□ -2.05
HRD1YOL013C FYV7Q12247 151 aa2.25□□□□□ -2.05
HRD1YOL013C NMT1P14743 455 aa2.25□□□□□ -2.05
HRD1YOL013C BUD23P25627 275 aaPredicted RBP2.25□□□□□ -2.05
HRD1YOL013C AGA2P32781 87 aa2.25□□□□□ -2.05
HRD1YOL013C YPT31P38555 223 aaKnown RBP2.25□□□□□ -2.05
HRD1YOL013C PHS1P40857 217 aa2.25□□□□□ -2.05
HRD1YOL013C SAY1P53324 424 aa2.25□□□□□ -2.05
HRD1YOL013C ELC1Q03071 99 aa2.25□□□□□ -2.05
HRD1YOL013C RDS3Q06835 107 aaPredicted RBP2.25□□□□□ -2.05
HRD1YOL013C YCR050CP25630 102 aa2.24□□□□□ -2.05
HRD1YOL013C MIG1P27705 504 aa2.24□□□□□ -2.05
HRD1YOL013C YDL241WQ07738 123 aa2.24□□□□□ -2.05
HRD1YOL013C YLR042CQ07990 161 aa2.24□□□□□ -2.05
HRD1YOL013C YPL225WQ08971 146 aaKnown RBP2.24□□□□□ -2.05
HRD1YOL013C HUT1Q12520 339 aa2.24□□□□□ -2.05
HRD1YOL013C ATG40Q99325 256 aa2.24□□□□□ -2.05
HRD1YOL013C MSB2P32334 1306 aa2.23□□□□□ -2.05
HRD1YOL013C ECM29P38737 1868 aa2.23□□□□□ -2.05
HRD1YOL013C YLR236CA0A023PZG4 107 aa2.23□□□□□ -2.05
HRD1YOL013C MDH2P22133 377 aa2.23□□□□□ -2.05
HRD1YOL013C MPM1P40364 252 aa2.23□□□□□ -2.05
HRD1YOL013C YDR114CQ04597 100 aa2.23□□□□□ -2.05
HRD1YOL013C YPR195CQ06594 109 aa2.23□□□□□ -2.05
HRD1YOL013C YOR015WQ12169 119 aa2.23□□□□□ -2.05
HRD1YOL013C YOR376W-AQ3E805 51 aa2.23□□□□□ -2.05
HRD1YOL013C RPL26AP05743 127 aaKnown RBP2.22□□□□□ -2.05
HRD1YOL013C GPA2P10823 449 aa2.22□□□□□ -2.05
HRD1YOL013C YOR062CP36025 268 aa2.22□□□□□ -2.05
HRD1YOL013C SFT2P38166 215 aa2.22□□□□□ -2.05
HRD1YOL013C YEL067CP39978 195 aa2.22□□□□□ -2.05
HRD1YOL013C TIR3P40552 269 aa2.22□□□□□ -2.05
HRD1YOL013C CIS3P47001 227 aa2.22□□□□□ -2.05
HRD1YOL013C RPS12P48589 143 aaKnown RBP2.22□□□□□ -2.05
HRD1YOL013C RPL26BP53221 127 aaKnown RBP2.22□□□□□ -2.05
HRD1YOL013C YMR252CQ04814 134 aa2.22□□□□□ -2.05
HRD1YOL013C RRT7Q07829 113 aa2.22□□□□□ -2.05
HRD1YOL013C ATG10Q07879 167 aa2.22□□□□□ -2.05
HRD1YOL013C YAL064WP39711 94 aa2.22□□□□□ -2.05
HRD1YOL013C SAE3P89114 91 aa2.22□□□□□ -2.05
HRD1YOL013C PIR1Q03178 341 aa2.22□□□□□ -2.05
HRD1YOL013C UPS1Q05776 175 aa2.22□□□□□ -2.05
HRD1YOL013C YPR013CQ12145 317 aa2.22□□□□□ -2.05
HRD1YOL013C DDP1Q99321 188 aaKnown RBP2.22□□□□□ -2.05
HRD1YOL013C SRL3P36167 246 aa2.21□□□□□ -2.06
HRD1YOL013C YHL042WP38729 150 aa2.21□□□□□ -2.06
HRD1YOL013C BAT2P47176 376 aaKnown RBP2.21□□□□□ -2.06
HRD1YOL013C PAC10P48363 199 aa2.21□□□□□ -2.06
HRD1YOL013C DML1Q03652 475 aa2.21□□□□□ -2.06
HRD1YOL013C SCS22Q6Q595 175 aa2.21□□□□□ -2.06
HRD1YOL013C ERV15P38312 142 aa2.2□□□□□ -2.06
HRD1YOL013C RPB11P38902 120 aa2.2□□□□□ -2.06
HRD1YOL013C YAR029WP39549 74 aa2.2□□□□□ -2.06
HRD1YOL013C YIR035CP40579 254 aa2.2□□□□□ -2.06
HRD1YOL013C YGL230CP53074 147 aa2.2□□□□□ -2.06
HRD1YOL013C MZM1Q03429 123 aaPredicted RBP2.2□□□□□ -2.06
HRD1YOL013C UPS3Q04006 179 aa2.2□□□□□ -2.06
HRD1YOL013C YOR385WQ08909 290 aa2.2□□□□□ -2.06
HRD1YOL013C UIP4Q08926 304 aa2.2□□□□□ -2.06
HRD1YOL013C RAD28Q12021 506 aa2.2□□□□□ -2.06
HRD1YOL013C ATG41Q12048 136 aa2.2□□□□□ -2.06
HRD1YOL013C YDL012CQ12489 107 aa2.2□□□□□ -2.06
HRD1YOL013C VAR1P02381 398 aa2.19□□□□□ -2.06
HRD1YOL013C SPS2P08459 502 aa2.19□□□□□ -2.06
HRD1YOL013C INO4P13902 151 aa2.19□□□□□ -2.06
HRD1YOL013C NSE4P43124 402 aa2.19□□□□□ -2.06
HRD1YOL013C CWC27Q02770 301 aa2.19□□□□□ -2.06
HRD1YOL013C OCA6Q12454 224 aa2.19□□□□□ -2.06
HRD1YOL013C MAK31P23059 88 aa2.18□□□□□ -2.06
HRD1YOL013C YHL018WP38744 120 aaPredicted RBP2.18□□□□□ -2.06
HRD1YOL013C IRC19Q07843 230 aa2.18□□□□□ -2.06
HRD1YOL013C MOT1P32333 1867 aa2.18□□□□□ -2.06
HRD1YOL013C RAS2P01120 322 aaKnown RBP2.18□□□□□ -2.06
HRD1YOL013C ANB1P19211 157 aa2.18□□□□□ -2.06
HRD1YOL013C PEX4P29340 183 aa2.18□□□□□ -2.06
HRD1YOL013C SDH4P37298 181 aa2.18□□□□□ -2.06
HRD1YOL013C PHO88P38264 188 aaPredicted RBP2.18□□□□□ -2.06
HRD1YOL013C GAA1P39012 614 aa2.18□□□□□ -2.06
HRD1YOL013C FLX1P40464 311 aa2.18□□□□□ -2.06
HRD1YOL013C MOB1P40484 314 aa2.18□□□□□ -2.06
HRD1YOL013C SPG1P50088 95 aa2.18□□□□□ -2.06
HRD1YOL013C THG1P53215 237 aaKnown RBP2.18□□□□□ -2.06
HRD1YOL013C VPS68Q12016 184 aa2.18□□□□□ -2.06
HRD1YOL013C FCF2Q12035 217 aaPredicted RBP2.18□□□□□ -2.06
HRD1YOL013C YOR097CQ12274 175 aaPredicted RBP2.18□□□□□ -2.06
HRD1YOL013C KTI11Q3E840 82 aa2.18□□□□□ -2.06
HRD1YOL013C COX5BP00425 151 aa2.17□□□□□ -2.06
HRD1YOL013C COX8P04039 78 aa2.17□□□□□ -2.06
HRD1YOL013C HAP2P06774 265 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 67.2 ms