RNA–Protein interactions for RNA: YLR199C

PBA1, Transcript of Protein involved in 20S proteasome assembly, yeastyeast

Gene PBA1, Length 831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBA1YLR199C RIM9Q04734 239 aa2.36□□□□□ -2.03
PBA1YLR199C YPR114WQ06107 315 aa2.36□□□□□ -2.03
PBA1YLR199C ANT1Q06497 328 aa2.36□□□□□ -2.03
PBA1YLR199C YOR381W-AQ3E804 55 aa2.36□□□□□ -2.03
PBA1YLR199C SOD1P00445 154 aaKnown RBP2.35□□□□□ -2.03
PBA1YLR199C YKR070WP36151 352 aaKnown RBP2.35□□□□□ -2.03
PBA1YLR199C TIR3P40552 269 aa2.35□□□□□ -2.03
PBA1YLR199C RDS3Q06835 107 aaPredicted RBP2.35□□□□□ -2.03
PBA1YLR199C YLR118CQ12354 227 aa2.35□□□□□ -2.03
PBA1YLR199C YDR524C-BQ3E6R4 66 aa2.35□□□□□ -2.03
PBA1YLR199C YLR236CA0A023PZG4 107 aa2.34□□□□□ -2.03
PBA1YLR199C GPA2P10823 449 aa2.34□□□□□ -2.03
PBA1YLR199C MRS4P23500 304 aa2.34□□□□□ -2.03
PBA1YLR199C ERV15P38312 142 aa2.34□□□□□ -2.03
PBA1YLR199C GEP7P53171 287 aa2.34□□□□□ -2.03
PBA1YLR199C RRT7Q07829 113 aa2.34□□□□□ -2.03
PBA1YLR199C LDB18Q07887 179 aa2.34□□□□□ -2.03
PBA1YLR199C SEC16P48415 2195 aaKnown RBP2.33□□□□□ -2.04
PBA1YLR199C RAS2P01120 322 aaKnown RBP2.33□□□□□ -2.04
PBA1YLR199C YOL162WP0CF19 215 aa2.33□□□□□ -2.04
PBA1YLR199C YPT31P38555 223 aaKnown RBP2.33□□□□□ -2.04
PBA1YLR199C PAC10P48363 199 aa2.33□□□□□ -2.04
PBA1YLR199C EMC4P53073 190 aa2.33□□□□□ -2.04
PBA1YLR199C AIM11P87275 137 aa2.33□□□□□ -2.04
PBA1YLR199C GRX5Q02784 150 aa2.33□□□□□ -2.04
PBA1YLR199C AIM36Q03798 255 aa2.33□□□□□ -2.04
PBA1YLR199C ATG10Q07879 167 aa2.33□□□□□ -2.04
PBA1YLR199C MIG1P27705 504 aa2.32□□□□□ -2.04
PBA1YLR199C GSP1P32835 219 aaKnown RBP2.32□□□□□ -2.04
PBA1YLR199C GSP2P32836 220 aaKnown RBP2.32□□□□□ -2.04
PBA1YLR199C YBR209WP38311 105 aa2.32□□□□□ -2.04
PBA1YLR199C ALB1P47019 175 aaPredicted RBP2.32□□□□□ -2.04
PBA1YLR199C ELC1Q03071 99 aa2.32□□□□□ -2.04
PBA1YLR199C CUE4Q04201 117 aaPredicted RBP2.32□□□□□ -2.04
PBA1YLR199C TVP18Q04767 167 aa2.32□□□□□ -2.04
PBA1YLR199C RNH202Q05635 350 aa2.32□□□□□ -2.04
PBA1YLR199C YPR195CQ06594 109 aa2.32□□□□□ -2.04
PBA1YLR199C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
PBA1YLR199C YPR013CQ12145 317 aa2.32□□□□□ -2.04
PBA1YLR199C UTP10P42945 1769 aaKnown RBP2.31□□□□□ -2.04
PBA1YLR199C FKS1P38631 1876 aaKnown RBP2.31□□□□□ -2.04
PBA1YLR199C DDI2P0CH63 225 aa2.31□□□□□ -2.04
PBA1YLR199C DDI3P0CH64 225 aa2.31□□□□□ -2.04
PBA1YLR199C MDH2P22133 377 aa2.31□□□□□ -2.04
PBA1YLR199C PEX4P29340 183 aa2.31□□□□□ -2.04
PBA1YLR199C YBL010CP32788 280 aa2.31□□□□□ -2.04
PBA1YLR199C LHP1P33399 275 aaKnown RBP2.31□□□□□ -2.04
PBA1YLR199C PHO88P38264 188 aaPredicted RBP2.31□□□□□ -2.04
PBA1YLR199C RGI1P40043 161 aaPredicted RBP2.31□□□□□ -2.04
PBA1YLR199C SAY1P53324 424 aa2.31□□□□□ -2.04
PBA1YLR199C PIR1Q03178 341 aa2.31□□□□□ -2.04
PBA1YLR199C DML1Q03652 475 aa2.31□□□□□ -2.04
PBA1YLR199C CSI2Q08054 341 aa2.31□□□□□ -2.04
PBA1YLR199C UIP4Q08926 304 aa2.31□□□□□ -2.04
PBA1YLR199C ADK1P07170 222 aaKnown RBP2.3□□□□□ -2.04
PBA1YLR199C NMT1P14743 455 aa2.3□□□□□ -2.04
PBA1YLR199C UTP11P34247 250 aaPredicted RBP2.3□□□□□ -2.04
PBA1YLR199C PHS1P40857 217 aa2.3□□□□□ -2.04
PBA1YLR199C SPG1P50088 95 aa2.3□□□□□ -2.04
PBA1YLR199C UPS3Q04006 179 aa2.3□□□□□ -2.04
PBA1YLR199C VPS68Q12016 184 aa2.3□□□□□ -2.04
PBA1YLR199C RAD28Q12021 506 aa2.3□□□□□ -2.04
PBA1YLR199C ATG41Q12048 136 aa2.3□□□□□ -2.04
PBA1YLR199C YOR015WQ12169 119 aa2.3□□□□□ -2.04
PBA1YLR199C HKR1P41809 1802 aa2.3□□□□□ -2.04
PBA1YLR199C SVP26P38869 228 aa2.29□□□□□ -2.04
PBA1YLR199C TMA23Q03525 211 aa2.29□□□□□ -2.04
PBA1YLR199C FYV7Q12247 151 aa2.29□□□□□ -2.04
PBA1YLR199C SCS22Q6Q595 175 aa2.29□□□□□ -2.04
PBA1YLR199C MSB2P32334 1306 aa2.28□□□□□ -2.04
PBA1YLR199C SEC11P15367 167 aa2.28□□□□□ -2.04
PBA1YLR199C YCR101CP25607 182 aa2.28□□□□□ -2.04
PBA1YLR199C YCR050CP25630 102 aa2.28□□□□□ -2.04
PBA1YLR199C FMT1P32785 401 aa2.28□□□□□ -2.04
PBA1YLR199C ETR1P38071 380 aa2.28□□□□□ -2.04
PBA1YLR199C SFT2P38166 215 aa2.28□□□□□ -2.04
PBA1YLR199C GAA1P39012 614 aa2.28□□□□□ -2.04
PBA1YLR199C YEL067CP39978 195 aa2.28□□□□□ -2.04
PBA1YLR199C GAT4P40569 121 aa2.28□□□□□ -2.04
PBA1YLR199C NSE4P43124 402 aa2.28□□□□□ -2.04
PBA1YLR199C KNH1P50112 268 aa2.28□□□□□ -2.04
PBA1YLR199C SAE3P89114 91 aa2.28□□□□□ -2.04
PBA1YLR199C UPS1Q05776 175 aa2.28□□□□□ -2.04
PBA1YLR199C BEM2P39960 2167 aaKnown RBP2.27□□□□□ -2.05
PBA1YLR199C SPS2P08459 502 aa2.27□□□□□ -2.05
PBA1YLR199C INO4P13902 151 aa2.27□□□□□ -2.05
PBA1YLR199C YOR062CP36025 268 aa2.27□□□□□ -2.05
PBA1YLR199C SDH4P37298 181 aa2.27□□□□□ -2.05
PBA1YLR199C YHL018WP38744 120 aaPredicted RBP2.27□□□□□ -2.05
PBA1YLR199C YHR022CP38763 256 aa2.27□□□□□ -2.05
PBA1YLR199C MOB1P40484 314 aa2.27□□□□□ -2.05
PBA1YLR199C POP3P53833 195 aaPredicted RBP2.27□□□□□ -2.05
PBA1YLR199C DAD3P69850 94 aa2.27□□□□□ -2.05
PBA1YLR199C YML079WQ03629 201 aa2.27□□□□□ -2.05
PBA1YLR199C YHP1Q04116 353 aa2.27□□□□□ -2.05
PBA1YLR199C YPR174CQ06616 221 aaPredicted RBP2.27□□□□□ -2.05
PBA1YLR199C YDL241WQ07738 123 aa2.27□□□□□ -2.05
PBA1YLR199C YOR289WQ12012 251 aaPredicted RBP2.27□□□□□ -2.05
PBA1YLR199C FCF2Q12035 217 aaPredicted RBP2.27□□□□□ -2.05
PBA1YLR199C EMC6Q12431 108 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms