RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W YMR007WQ03675 126 aa2.69□□□□□ -1.98
SSL1YLR005W FIT2Q08906 153 aa2.69□□□□□ -1.98
SSL1YLR005W UTP23Q12339 254 aaKnown RBP2.69□□□□□ -1.98
SSL1YLR005W RTC6O14464 93 aa2.68□□□□□ -1.98
SSL1YLR005W HTB2P02294 131 aa2.68□□□□□ -1.98
SSL1YLR005W GCN3P14741 305 aa2.68□□□□□ -1.98
SSL1YLR005W AHT1P29589 182 aa2.68□□□□□ -1.98
SSL1YLR005W YBR292CP38357 123 aa2.68□□□□□ -1.98
SSL1YLR005W ASP1P38986 381 aaPredicted RBP2.68□□□□□ -1.98
SSL1YLR005W EMC5P40540 141 aa2.68□□□□□ -1.98
SSL1YLR005W CDC40P40968 455 aaPredicted RBP2.68□□□□□ -1.98
SSL1YLR005W MRPL50P53724 139 aa2.68□□□□□ -1.98
SSL1YLR005W YNR066CP53752 436 aa2.68□□□□□ -1.98
SSL1YLR005W MRPS17Q03246 237 aaPredicted RBP2.68□□□□□ -1.98
SSL1YLR005W PBA1Q05778 276 aa2.68□□□□□ -1.98
SSL1YLR005W LCL2Q08045 131 aa2.68□□□□□ -1.98
SSL1YLR005W FCF2Q12035 217 aaPredicted RBP2.68□□□□□ -1.98
SSL1YLR005W YPR010C-AA5Z2X5 72 aa2.67□□□□□ -1.98
SSL1YLR005W Q0255P03881 472 aa2.67□□□□□ -1.98
SSL1YLR005W AME1P38313 324 aa2.67□□□□□ -1.98
SSL1YLR005W YJL028WP47062 111 aa2.67□□□□□ -1.98
SSL1YLR005W DSK2P48510 373 aa2.67□□□□□ -1.98
SSL1YLR005W BRP1P53194 125 aa2.67□□□□□ -1.98
SSL1YLR005W TIM21P53220 239 aa2.67□□□□□ -1.98
SSL1YLR005W ERI1P62651 68 aaKnown RBP2.67□□□□□ -1.98
SSL1YLR005W AVO2Q04749 426 aa2.67□□□□□ -1.98
SSL1YLR005W SPO13P23624 291 aa2.66□□□□□ -1.98
SSL1YLR005W ACB1P31787 87 aa2.66□□□□□ -1.98
SSL1YLR005W MRPL28P36527 147 aa2.66□□□□□ -1.98
SSL1YLR005W YHR173CP38864 112 aa2.66□□□□□ -1.98
SSL1YLR005W YNL217WP40152 326 aa2.66□□□□□ -1.98
SSL1YLR005W AIM34Q03673 198 aa2.66□□□□□ -1.98
SSL1YLR005W YLR342W-AQ3E810 57 aa2.66□□□□□ -1.98
SSL1YLR005W YOL085CQ99345 113 aa2.66□□□□□ -1.98
SSL1YLR005W UBI4P0CG63 381 aaKnown RBP2.65□□□□□ -1.98
SSL1YLR005W RNA15P25299 296 aaPredicted RBP2.65□□□□□ -1.98
SSL1YLR005W CDC50P25656 391 aa2.65□□□□□ -1.98
SSL1YLR005W RPL16BP26785 198 aaKnown RBP2.65□□□□□ -1.98
SSL1YLR005W YBR013CP38215 129 aa2.65□□□□□ -1.98
SSL1YLR005W RRT13P40042 185 aa2.65□□□□□ -1.98
SSL1YLR005W YGL185CP53100 379 aa2.65□□□□□ -1.98
SSL1YLR005W DAD1Q12248 94 aa2.65□□□□□ -1.98
SSL1YLR005W DFM1Q12743 341 aaKnown RBP2.65□□□□□ -1.98
SSL1YLR005W CKS1P20486 150 aaKnown RBP2.64□□□□□ -1.99
SSL1YLR005W SMD3P43321 101 aaKnown RBP2.64□□□□□ -1.99
SSL1YLR005W YJR111CP47148 283 aaKnown RBP2.64□□□□□ -1.99
SSL1YLR005W YCL001W-AP87012 153 aa2.64□□□□□ -1.99
SSL1YLR005W UPS3Q04006 179 aa2.64□□□□□ -1.99
SSL1YLR005W DPP1Q05521 289 aa2.64□□□□□ -1.99
SSL1YLR005W YLR042CQ07990 161 aa2.64□□□□□ -1.99
SSL1YLR005W YLL066W-BQ8TGJ7 56 aa2.64□□□□□ -1.99
SSL1YLR005W RPL33AP05744 107 aaKnown RBP2.63□□□□□ -1.99
SSL1YLR005W YDR034C-AP0C289 58 aa2.63□□□□□ -1.99
SSL1YLR005W AGA1P32323 725 aa2.63□□□□□ -1.99
SSL1YLR005W HMX1P32339 317 aa2.63□□□□□ -1.99
SSL1YLR005W TRS20P38334 175 aa2.63□□□□□ -1.99
SSL1YLR005W RPL33BP41056 107 aaKnown RBP2.63□□□□□ -1.99
SSL1YLR005W YGR017WP53210 297 aa2.63□□□□□ -1.99
SSL1YLR005W RAV2Q03956 351 aa2.63□□□□□ -1.99
SSL1YLR005W ANT1Q06497 328 aa2.63□□□□□ -1.99
SSL1YLR005W YBR200W-AQ3E755 54 aa2.63□□□□□ -1.99
SSL1YLR005W YBR298C-AQ8TGK4 73 aa2.63□□□□□ -1.99
SSL1YLR005W RPL12AP0CX53 165 aaKnown RBP2.62□□□□□ -1.99
SSL1YLR005W RPL12BP0CX54 165 aa2.62□□□□□ -1.99
SSL1YLR005W MAG1P22134 296 aaKnown RBP2.62□□□□□ -1.99
SSL1YLR005W KTI12P34253 313 aaKnown RBP2.62□□□□□ -1.99
SSL1YLR005W SHG1P38337 142 aa2.62□□□□□ -1.99
SSL1YLR005W YMR141CP40211 102 aa2.62□□□□□ -1.99
SSL1YLR005W MGA1P53050 456 aa2.62□□□□□ -1.99
SSL1YLR005W DAD4P69851 72 aa2.62□□□□□ -1.99
SSL1YLR005W SDO1Q07953 250 aaKnown RBP2.62□□□□□ -1.99
SSL1YLR005W DGA1Q08650 418 aa2.62□□□□□ -1.99
SSL1YLR005W PCC1Q3E833 88 aa2.62□□□□□ -1.99
SSL1YLR005W YCR007CP25354 239 aa2.61□□□□□ -1.99
SSL1YLR005W MIX23P38162 196 aa2.61□□□□□ -1.99
SSL1YLR005W SVP26P38869 228 aa2.61□□□□□ -1.99
SSL1YLR005W TEM1P38987 245 aa2.61□□□□□ -1.99
SSL1YLR005W SUR2P38992 349 aa2.61□□□□□ -1.99
SSL1YLR005W GCV3P39726 170 aaPredicted RBP2.61□□□□□ -1.99
SSL1YLR005W CYB5P40312 120 aa2.61□□□□□ -1.99
SSL1YLR005W LOC1P43586 204 aaPredicted RBP2.61□□□□□ -1.99
SSL1YLR005W ATP19P81451 68 aa2.61□□□□□ -1.99
SSL1YLR005W TIM22Q12328 207 aa2.61□□□□□ -1.99
SSL1YLR005W YMR122W-AQ3E842 84 aa2.61□□□□□ -1.99
SSL1YLR005W RPS22AP0C0W1 130 aaKnown RBP2.61□□□□□ -1.99
SSL1YLR005W SAR1P20606 190 aaKnown RBP2.61□□□□□ -1.99
SSL1YLR005W YCR023CP25351 611 aa2.61□□□□□ -1.99
SSL1YLR005W RPS0AP32905 252 aaKnown RBP2.61□□□□□ -1.99
SSL1YLR005W YGR026WP53217 278 aa2.61□□□□□ -1.99
SSL1YLR005W PAU4P53427 120 aa2.61□□□□□ -1.99
SSL1YLR005W EOS1P53938 366 aa2.61□□□□□ -1.99
SSL1YLR005W DIA1P54005 336 aa2.61□□□□□ -1.99
SSL1YLR005W PMP3P87284 55 aa2.61□□□□□ -1.99
SSL1YLR005W YOR105WQ08504 108 aa2.61□□□□□ -1.99
SSL1YLR005W YOR015WQ12169 119 aa2.61□□□□□ -1.99
SSL1YLR005W SPC25P40014 221 aa2.6□□□□□ -1.99
SSL1YLR005W TAD2P47058 250 aa2.6□□□□□ -1.99
SSL1YLR005W LCL1Q02786 101 aa2.6□□□□□ -1.99
SSL1YLR005W BET5Q03630 159 aa2.6□□□□□ -1.99
SSL1YLR005W YDR115WQ04598 105 aa2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 69.6 ms