RNA–Protein interactions for RNA: YKR077W

MSA2, Transcript of Putative transcriptional activator, yeastyeast

Gene MSA2, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSA2YKR077W SUI1P32911 108 aaKnown RBP1.29□□□□□ -2.2
MSA2YKR077W ECM31P38122 312 aa1.29□□□□□ -2.2
MSA2YKR077W SFT1P43682 97 aa1.29□□□□□ -2.2
MSA2YKR077W GPI2P46961 280 aa1.29□□□□□ -2.2
MSA2YKR077W YNL019CP53975 284 aa1.29□□□□□ -2.2
MSA2YKR077W NMA1Q06178 401 aaKnown RBP1.29□□□□□ -2.2
MSA2YKR077W YLR118CQ12354 227 aa1.29□□□□□ -2.2
MSA2YKR077W YNL277W-AQ3E7Z0 62 aa1.29□□□□□ -2.2
MSA2YKR077W SSN2P38931 1420 aa1.29□□□□□ -2.2
MSA2YKR077W ADK1P07170 222 aaKnown RBP1.28□□□□□ -2.2
MSA2YKR077W AIM11P87275 137 aa1.28□□□□□ -2.2
MSA2YKR077W SAE3P89114 91 aa1.28□□□□□ -2.2
MSA2YKR077W BUD4P47136 1447 aa1.28□□□□□ -2.2
MSA2YKR077W HSL1P34244 1518 aa1.28□□□□□ -2.2
MSA2YKR077W SPP41P38904 1435 aa1.27□□□□□ -2.21
MSA2YKR077W MRS4P23500 304 aa1.27□□□□□ -2.21
MSA2YKR077W RPL14AP36105 138 aaKnown RBP1.27□□□□□ -2.21
MSA2YKR077W RPL14BP38754 138 aaKnown RBP1.27□□□□□ -2.21
MSA2YKR077W RPS12P48589 143 aaKnown RBP1.27□□□□□ -2.21
MSA2YKR077W YGR017WP53210 297 aa1.27□□□□□ -2.21
MSA2YKR077W EST3Q03096 181 aa1.27□□□□□ -2.21
MSA2YKR077W TSC11P40061 1430 aa1.26□□□□□ -2.21
MSA2YKR077W HFA1P32874 2273 aa1.26□□□□□ -2.21
MSA2YKR077W YER039C-AP0CD97 72 aa1.26□□□□□ -2.21
MSA2YKR077W HSP12P22943 109 aaKnown RBP1.26□□□□□ -2.21
MSA2YKR077W YCL001W-BQ96VH2 84 aa1.26□□□□□ -2.21
MSA2YKR077W TY1B-HO13535 1793 aa1.26□□□□□ -2.21
MSA2YKR077W MYO2P19524 1574 aaKnown RBP1.25□□□□□ -2.21
MSA2YKR077W GAT4P40569 121 aa1.25□□□□□ -2.21
MSA2YKR077W EMC4P53073 190 aa1.25□□□□□ -2.21
MSA2YKR077W ELC1Q03071 99 aa1.25□□□□□ -2.21
MSA2YKR077W TVP18Q04767 167 aa1.25□□□□□ -2.21
MSA2YKR077W ZEO1Q08245 113 aa1.25□□□□□ -2.21
MSA2YKR077W FCF2Q12035 217 aaPredicted RBP1.25□□□□□ -2.21
MSA2YKR077W HUT1Q12520 339 aa1.25□□□□□ -2.21
MSA2YKR077W YGL041W-AP0C5N3 154 aa1.24□□□□□ -2.21
MSA2YKR077W DDR48P18899 430 aaKnown RBP1.24□□□□□ -2.21
MSA2YKR077W HYP2P23301 157 aaKnown RBP1.24□□□□□ -2.21
MSA2YKR077W SFT2P38166 215 aa1.24□□□□□ -2.21
MSA2YKR077W PHS1P40857 217 aa1.24□□□□□ -2.21
MSA2YKR077W YLR042CQ07990 161 aa1.24□□□□□ -2.21
MSA2YKR077W RTR2Q12378 196 aa1.24□□□□□ -2.21
MSA2YKR077W KTI11Q3E840 82 aa1.24□□□□□ -2.21
MSA2YKR077W YHR213W-BQ8TGK1 99 aa1.24□□□□□ -2.21
MSA2YKR077W UBR1P19812 1950 aa1.23□□□□□ -2.21
MSA2YKR077W HAP2P06774 265 aa1.23□□□□□ -2.21
MSA2YKR077W ANB1P19211 157 aa1.23□□□□□ -2.21
MSA2YKR077W ATG8P38182 117 aaRIP-Chip data1.23□□□□□ -2.21not detected
MSA2YKR077W RPB11P38902 120 aa1.23□□□□□ -2.21
MSA2YKR077W IPT1P38954 527 aa1.23□□□□□ -2.21
MSA2YKR077W YAR029WP39549 74 aa1.23□□□□□ -2.21
MSA2YKR077W HHY1P39982 102 aa1.23□□□□□ -2.21
MSA2YKR077W YNL122CP53921 115 aaPredicted RBP1.23□□□□□ -2.21
MSA2YKR077W RRT7Q07829 113 aa1.23□□□□□ -2.21
MSA2YKR077W OCA6Q12454 224 aa1.23□□□□□ -2.21
MSA2YKR077W DDP1Q99321 188 aaKnown RBP1.23□□□□□ -2.21
MSA2YKR077W YCR050CP25630 102 aa1.22□□□□□ -2.21
MSA2YKR077W YBR090CP38253 122 aa1.22□□□□□ -2.21
MSA2YKR077W DIE2P50076 525 aa1.22□□□□□ -2.21
MSA2YKR077W YOR097CQ12274 175 aaPredicted RBP1.22□□□□□ -2.21
MSA2YKR077W TRM732Q03496 1420 aa1.22□□□□□ -2.21
MSA2YKR077W UBC5P15732 148 aa1.21□□□□□ -2.22
MSA2YKR077W YAL064WP39711 94 aa1.21□□□□□ -2.22
MSA2YKR077W SPG1P50088 95 aa1.21□□□□□ -2.22
MSA2YKR077W IRC19Q07843 230 aa1.21□□□□□ -2.22
MSA2YKR077W YOR376W-AQ3E805 51 aa1.21□□□□□ -2.22
MSA2YKR077W SCS22Q6Q595 175 aa1.21□□□□□ -2.22
MSA2YKR077W KRE5P22023 1365 aa1.21□□□□□ -2.22
MSA2YKR077W HAP3P13434 144 aa1.2□□□□□ -2.22
MSA2YKR077W SEC59P20048 519 aa1.2□□□□□ -2.22
MSA2YKR077W SRL3P36167 246 aa1.2□□□□□ -2.22
MSA2YKR077W AIM18P38884 321 aa1.2□□□□□ -2.22
MSA2YKR077W YEA6P39953 335 aa1.2□□□□□ -2.22
MSA2YKR077W PAM16P42949 149 aa1.2□□□□□ -2.22
MSA2YKR077W GNA1P43577 159 aaPredicted RBP1.2□□□□□ -2.22
MSA2YKR077W LSM8P47093 109 aaKnown RBP1.2□□□□□ -2.22
MSA2YKR077W YOR072WQ08486 104 aa1.2□□□□□ -2.22
MSA2YKR077W YOR385WQ08909 290 aa1.2□□□□□ -2.22
MSA2YKR077W YKL068W-AQ3E826 78 aa1.2□□□□□ -2.22
MSA2YKR077W PDR11P40550 1411 aa1.2□□□□□ -2.22
MSA2YKR077W YCR099CP25657 155 aa1.19□□□□□ -2.22
MSA2YKR077W YGR164WP53291 111 aa1.19□□□□□ -2.22
MSA2YKR077W YMR103CQ04436 120 aa1.19□□□□□ -2.22
MSA2YKR077W REV3P14284 1504 aa1.19□□□□□ -2.22
MSA2YKR077W ROM2P51862 1356 aaKnown RBP1.19□□□□□ -2.22
MSA2YKR077W COX5BP00425 151 aa1.18□□□□□ -2.22
MSA2YKR077W QCR10P37299 77 aa1.18□□□□□ -2.22
MSA2YKR077W YFR035CP43608 114 aa1.18□□□□□ -2.22
MSA2YKR077W MPC1P53157 130 aaKnown RBP1.18□□□□□ -2.22
MSA2YKR077W ATP19P81451 68 aa1.18□□□□□ -2.22
MSA2YKR077W SOM1Q05676 74 aa1.18□□□□□ -2.22
MSA2YKR077W GTT2Q12390 233 aa1.18□□□□□ -2.22
MSA2YKR077W YCR075W-AQ3E830 75 aa1.18□□□□□ -2.22
MSA2YKR077W FYV5P25585 152 aa1.17□□□□□ -2.22
MSA2YKR077W YKL044WP36092 106 aa1.17□□□□□ -2.22
MSA2YKR077W NHP10Q03435 203 aa1.17□□□□□ -2.22
MSA2YKR077W RAF1Q06891 181 aa1.17□□□□□ -2.22
MSA2YKR077W MED11Q99278 115 aa1.17□□□□□ -2.22
MSA2YKR077W GEA2P39993 1459 aaKnown RBP1.17□□□□□ -2.22
MSA2YKR077W GEA1P47102 1408 aaPredicted RBP1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 36.8 ms