RNA–Protein interactions for RNA: YKL011C

CCE1, Transcript of Mitochondrial cruciform cutting endonuclease, yeastyeast

Gene CCE1, Length 1,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCE1YKL011C PRM3Q08931 133 aa0.96□□□□□ -2.26
CCE1YKL011C YHR213WP0CI67 198 aa0.95□□□□□ -2.26
CCE1YKL011C NMT1P14743 455 aa0.95□□□□□ -2.26
CCE1YKL011C RPS1AP33442 255 aaKnown RBP0.95□□□□□ -2.26
CCE1YKL011C YPL067CQ02754 198 aa0.95□□□□□ -2.26
CCE1YKL011C RPL40AP0CH08 128 aaKnown RBP0.94□□□□□ -2.26
CCE1YKL011C RPL40BP0CH09 128 aaKnown RBP0.94□□□□□ -2.26
CCE1YKL011C FUN14P18411 198 aa0.94□□□□□ -2.26
CCE1YKL011C ANB1P19211 157 aa0.94□□□□□ -2.26
CCE1YKL011C EMC4P53073 190 aa0.94□□□□□ -2.26
CCE1YKL011C BRP1P53194 125 aa0.94□□□□□ -2.26
CCE1YKL011C COA4Q05809 96 aa0.94□□□□□ -2.26
CCE1YKL011C MRPL44P19956 98 aa0.93□□□□□ -2.26
CCE1YKL011C RPC19P28000 142 aaKnown RBP0.93□□□□□ -2.26
CCE1YKL011C YMR141CP40211 102 aa0.93□□□□□ -2.26
CCE1YKL011C HPM1P40481 377 aa0.92□□□□□ -2.26
CCE1YKL011C KTI11Q3E840 82 aa0.92□□□□□ -2.26
CCE1YKL011C GSC2P40989 1895 aa0.92□□□□□ -2.26
CCE1YKL011C YCR050CP25630 102 aa0.91□□□□□ -2.26
CCE1YKL011C UTP11P34247 250 aaPredicted RBP0.91□□□□□ -2.26
CCE1YKL011C QCR10P37299 77 aa0.91□□□□□ -2.26
CCE1YKL011C YGL149WP53116 101 aa0.91□□□□□ -2.26
CCE1YKL011C RPL14AP36105 138 aaKnown RBP0.9□□□□□ -2.27
CCE1YKL011C AIM4P38305 123 aaPredicted RBP0.9□□□□□ -2.27
CCE1YKL011C RPL14BP38754 138 aaKnown RBP0.9□□□□□ -2.27
CCE1YKL011C LAA1P39526 2014 aa0.89□□□□□ -2.27
CCE1YKL011C YAL064WP39711 94 aa0.89□□□□□ -2.27
CCE1YKL011C YLR296WQ05898 108 aa0.89□□□□□ -2.27
CCE1YKL011C COA6Q3E846 104 aa0.89□□□□□ -2.27
CCE1YKL011C PFY1P07274 126 aa0.88□□□□□ -2.27
CCE1YKL011C MVB12P42939 101 aa0.88□□□□□ -2.27
CCE1YKL011C FIT3Q08907 204 aa0.88□□□□□ -2.27
CCE1YKL011C RPL43AP0CX25 92 aaKnown RBP0.87□□□□□ -2.27
CCE1YKL011C RPL43BP0CX26 92 aa0.87□□□□□ -2.27
CCE1YKL011C MRPL11P36521 249 aaPredicted RBP0.87□□□□□ -2.27
CCE1YKL011C TRS20P38334 175 aa0.87□□□□□ -2.27
CCE1YKL011C HUG1Q6Q5K6 68 aa0.87□□□□□ -2.27
CCE1YKL011C RTC6O14464 93 aa0.86□□□□□ -2.27
CCE1YKL011C ELC1Q03071 99 aa0.86□□□□□ -2.27
CCE1YKL011C CSN9Q03981 162 aa0.86□□□□□ -2.27
CCE1YKL011C SDH7Q04401 133 aa0.86□□□□□ -2.27
CCE1YKL011C GTT2Q12390 233 aa0.86□□□□□ -2.27
CCE1YKL011C PAU21P0CE86 164 aa0.85□□□□□ -2.27
CCE1YKL011C PAU22P0CE87 164 aa0.85□□□□□ -2.27
CCE1YKL011C HAP3P13434 144 aa0.85□□□□□ -2.27
CCE1YKL011C YBR013CP38215 129 aa0.85□□□□□ -2.27
CCE1YKL011C CYC2P38909 366 aa0.85□□□□□ -2.27
CCE1YKL011C MIC27P50945 234 aa0.85□□□□□ -2.27
CCE1YKL011C URA2P07259 2214 aaKnown RBP0.85□□□□□ -2.27
CCE1YKL011C AIM18P38884 321 aa0.84□□□□□ -2.27
CCE1YKL011C HSP10P38910 106 aa0.84□□□□□ -2.27
CCE1YKL011C TVP18Q04767 167 aa0.84□□□□□ -2.27
CCE1YKL011C YNL277W-AQ3E7Z0 62 aa0.84□□□□□ -2.27
CCE1YKL011C YLR307C-AQ3E825 87 aa0.84□□□□□ -2.27
CCE1YKL011C YSF3P0C074 85 aaPredicted RBP0.83□□□□□ -2.28
CCE1YKL011C PRS3P38689 320 aaKnown RBP0.83□□□□□ -2.28
CCE1YKL011C PHS1P40857 217 aa0.83□□□□□ -2.28
CCE1YKL011C SNT2P53127 1403 aa0.82□□□□□ -2.28
CCE1YKL011C GIM4P40005 111 aaKnown RBP0.82□□□□□ -2.28
CCE1YKL011C YOR034C-AQ3E735 80 aa0.82□□□□□ -2.28
CCE1YKL011C YGR017WP53210 297 aa0.81□□□□□ -2.28
CCE1YKL011C TY4B-JP47024 1803 aa0.8□□□□□ -2.28
CCE1YKL011C YLR157W-EP0CF00 54 aa0.8□□□□□ -2.28
CCE1YKL011C GSP1P32835 219 aaKnown RBP0.8□□□□□ -2.28
CCE1YKL011C LDB18Q07887 179 aa0.8□□□□□ -2.28
CCE1YKL011C ATP14Q12349 124 aa0.8□□□□□ -2.28
CCE1YKL011C SUA7P29055 345 aaPredicted RBP0.79□□□□□ -2.28
CCE1YKL011C HYM1P32464 399 aa0.79□□□□□ -2.28
CCE1YKL011C RPS20P38701 121 aaKnown RBP0.79□□□□□ -2.28
CCE1YKL011C YGL204CP53089 101 aa0.79□□□□□ -2.28
CCE1YKL011C YMR321CQ04898 105 aa0.79□□□□□ -2.28
CCE1YKL011C YDR278CQ05612 105 aa0.79□□□□□ -2.28
CCE1YKL011C MPC1P53157 130 aaKnown RBP0.78□□□□□ -2.28
CCE1YKL011C YLR361C-AQ3E795 98 aa0.78□□□□□ -2.28
CCE1YKL011C MED11Q99278 115 aa0.78□□□□□ -2.28
CCE1YKL011C RPL36BO14455 100 aaKnown RBP0.77□□□□□ -2.29
CCE1YKL011C RPL36AP05745 100 aaPredicted RBP0.77□□□□□ -2.29
CCE1YKL011C SFT1P43682 97 aa0.77□□□□□ -2.29
CCE1YKL011C YGR042WP53227 271 aa0.76□□□□□ -2.29
CCE1YKL011C TIM8P57744 87 aa0.76□□□□□ -2.29
CCE1YKL011C FCF2Q12035 217 aaPredicted RBP0.76□□□□□ -2.29
CCE1YKL011C Q0144Q9ZZW2 109 aa0.76□□□□□ -2.29
CCE1YKL011C MRPL31P14063 131 aaPredicted RBP0.75□□□□□ -2.29
CCE1YKL011C YIL163CP40448 117 aa0.75□□□□□ -2.29
CCE1YKL011C YLR194CQ05777 254 aa0.75□□□□□ -2.29
CCE1YKL011C GAT4P40569 121 aa0.74□□□□□ -2.29
CCE1YKL011C ERV14P53173 138 aa0.74□□□□□ -2.29
CCE1YKL011C CNL1Q06333 122 aa0.74□□□□□ -2.29
CCE1YKL011C YRF1-3P0CX14 1859 aa0.73□□□□□ -2.29
CCE1YKL011C YRF1-7P0CX15 1859 aa0.73□□□□□ -2.29
CCE1YKL011C SEC59P20048 519 aa0.73□□□□□ -2.29
CCE1YKL011C HPA2Q06592 156 aa0.71□□□□□ -2.3
CCE1YKL011C TRM732Q03496 1420 aa0.71□□□□□ -2.3
CCE1YKL011C EMP24P32803 203 aaKnown RBP0.7□□□□□ -2.3
CCE1YKL011C POR2P40478 281 aa0.7□□□□□ -2.3
CCE1YKL011C SRX1P36077 127 aa0.69□□□□□ -2.3
CCE1YKL011C YKL044WP36092 106 aa0.69□□□□□ -2.3
CCE1YKL011C SPC2Q04969 178 aa0.69□□□□□ -2.3
CCE1YKL011C YOR376W-AQ3E805 51 aa0.69□□□□□ -2.3
CCE1YKL011C TY1B-HO13535 1793 aa0.68□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 36.8 ms