RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C YAR064WP39563 99 aa2.38□□□□□ -2.03
YIR043CYIR043C HUA1P40325 198 aa2.38□□□□□ -2.03
YIR043CYIR043C PHS1P40857 217 aa2.38□□□□□ -2.03
YIR043CYIR043C SFT1P43682 97 aa2.38□□□□□ -2.03
YIR043CYIR043C ATG8P38182 117 aaRIP-Chip data2.37□□□□□ -2.03not detected
YIR043CYIR043C YAL064WP39711 94 aa2.37□□□□□ -2.03
YIR043CYIR043C WIP1Q2V2P8 89 aa2.37□□□□□ -2.03
YIR043CYIR043C SLH1P53327 1967 aaKnown RBP2.37□□□□□ -2.03
YIR043CYIR043C BRP1P53194 125 aa2.36□□□□□ -2.03
YIR043CYIR043C SDH7Q04401 133 aa2.36□□□□□ -2.03
YIR043CYIR043C MHF1Q3E835 90 aa2.36□□□□□ -2.03
YIR043CYIR043C Q0144Q9ZZW2 109 aa2.36□□□□□ -2.03
YIR043CYIR043C RPL33AP05744 107 aaKnown RBP2.35□□□□□ -2.03
YIR043CYIR043C HSL1P34244 1518 aa2.35□□□□□ -2.03
YIR043CYIR043C FUN14P18411 198 aa2.34□□□□□ -2.03
YIR043CYIR043C SFT2P38166 215 aa2.34□□□□□ -2.03
YIR043CYIR043C NKP2Q06162 153 aa2.34□□□□□ -2.03
YIR043CYIR043C RPO41P13433 1351 aaKnown RBP2.34□□□□□ -2.04
YIR043CYIR043C SLO1Q3E784 85 aa2.33□□□□□ -2.04
YIR043CYIR043C SKI3P17883 1432 aaKnown RBP2.33□□□□□ -2.04
YIR043CYIR043C YGL014C-AP0C5N1 53 aa2.32□□□□□ -2.04
YIR043CYIR043C UTP11P34247 250 aaPredicted RBP2.32□□□□□ -2.04
YIR043CYIR043C SRL3P36167 246 aa2.32□□□□□ -2.04
YIR043CYIR043C YPL067CQ02754 198 aa2.32□□□□□ -2.04
YIR043CYIR043C FRQ1Q06389 190 aa2.32□□□□□ -2.04
YIR043CYIR043C CCW12Q12127 133 aa2.32□□□□□ -2.04
YIR043CYIR043C NMT1P14743 455 aa2.31□□□□□ -2.04
YIR043CYIR043C GAT4P40569 121 aa2.31□□□□□ -2.04
YIR043CYIR043C SEN15Q04675 128 aa2.31□□□□□ -2.04
YIR043CYIR043C YOR304C-AO14468 76 aa2.3□□□□□ -2.04
YIR043CYIR043C ANB1P19211 157 aa2.3□□□□□ -2.04
YIR043CYIR043C UGX2P32772 223 aa2.3□□□□□ -2.04
YIR043CYIR043C YIL102CP40488 101 aa2.3□□□□□ -2.04
YIR043CYIR043C MPC1P53157 130 aaKnown RBP2.3□□□□□ -2.04
YIR043CYIR043C YOR289WQ12012 251 aaPredicted RBP2.3□□□□□ -2.04
YIR043CYIR043C YCR101CP25607 182 aa2.29□□□□□ -2.04
YIR043CYIR043C MRP49P32388 137 aa2.29□□□□□ -2.04
YIR043CYIR043C LST8P41318 303 aa2.29□□□□□ -2.04
YIR043CYIR043C RPL37AP49166 88 aaKnown RBP2.29□□□□□ -2.04
YIR043CYIR043C YGL149WP53116 101 aa2.29□□□□□ -2.04
YIR043CYIR043C YNL122CP53921 115 aaPredicted RBP2.29□□□□□ -2.04
YIR043CYIR043C ARL3Q02804 198 aa2.29□□□□□ -2.04
YIR043CYIR043C YMR122CQ03879 124 aa2.29□□□□□ -2.04
YIR043CYIR043C SNT2P53127 1403 aa2.28□□□□□ -2.04
YIR043CYIR043C YHR213WP0CI67 198 aa2.28□□□□□ -2.04
YIR043CYIR043C GSP1P32835 219 aaKnown RBP2.28□□□□□ -2.04
YIR043CYIR043C RUB1Q03919 77 aa2.28□□□□□ -2.04
YIR043CYIR043C LDB18Q07887 179 aa2.28□□□□□ -2.04
YIR043CYIR043C PAU21P0CE86 164 aa2.27□□□□□ -2.05
YIR043CYIR043C PAU22P0CE87 164 aa2.27□□□□□ -2.05
YIR043CYIR043C RPL40AP0CH08 128 aaKnown RBP2.27□□□□□ -2.05
YIR043CYIR043C RPL40BP0CH09 128 aaKnown RBP2.27□□□□□ -2.05
YIR043CYIR043C YCR001WP25347 104 aa2.27□□□□□ -2.05
YIR043CYIR043C LCL2Q08045 131 aa2.26□□□□□ -2.05
YIR043CYIR043C YPL225WQ08971 146 aaKnown RBP2.26□□□□□ -2.05
YIR043CYIR043C TOP2P06786 1428 aaKnown RBP2.25□□□□□ -2.05
YIR043CYIR043C BUD23P25627 275 aaPredicted RBP2.25□□□□□ -2.05
YIR043CYIR043C LHP1P33399 275 aaKnown RBP2.25□□□□□ -2.05
YIR043CYIR043C MRPL11P36521 249 aaPredicted RBP2.25□□□□□ -2.05
YIR043CYIR043C HSP10P38910 106 aa2.25□□□□□ -2.05
YIR043CYIR043C VMA7P39111 118 aa2.25□□□□□ -2.05
YIR043CYIR043C RGI1P40043 161 aaPredicted RBP2.25□□□□□ -2.05
YIR043CYIR043C FYV7Q12247 151 aa2.25□□□□□ -2.05
YIR043CYIR043C YIR021W-AQ3E739 70 aa2.25□□□□□ -2.05
YIR043CYIR043C YLR099W-AQ3E798 87 aa2.24□□□□□ -2.05
YIR043CYIR043C MYO2P19524 1574 aaKnown RBP2.23□□□□□ -2.05
YIR043CYIR043C GSC2P40989 1895 aa2.23□□□□□ -2.05
YIR043CYIR043C YOL013W-AP0C272 63 aaPredicted RBP2.23□□□□□ -2.05
YIR043CYIR043C HAP3P13434 144 aa2.23□□□□□ -2.05
YIR043CYIR043C SAE3P89114 91 aa2.23□□□□□ -2.05
YIR043CYIR043C IRC21Q04772 201 aa2.23□□□□□ -2.05
YIR043CYIR043C YLR296WQ05898 108 aa2.23□□□□□ -2.05
YIR043CYIR043C PRM3Q08931 133 aa2.23□□□□□ -2.05
YIR043CYIR043C RTC6O14464 93 aa2.22□□□□□ -2.05
YIR043CYIR043C HAP2P06774 265 aa2.22□□□□□ -2.05
YIR043CYIR043C AIM11P87275 137 aa2.22□□□□□ -2.05
YIR043CYIR043C APS2Q00381 147 aa2.22□□□□□ -2.05
YIR043CYIR043C YLR118CQ12354 227 aa2.22□□□□□ -2.05
YIR043CYIR043C HFA1P32874 2273 aa2.21□□□□□ -2.06
YIR043CYIR043C MDS3P53094 1487 aa2.21□□□□□ -2.06
YIR043CYIR043C COA4Q05809 96 aa2.21□□□□□ -2.06
YIR043CYIR043C ADK1P07170 222 aaKnown RBP2.2□□□□□ -2.06
YIR043CYIR043C PFY1P07274 126 aa2.2□□□□□ -2.06
YIR043CYIR043C AIM36Q03798 255 aa2.2□□□□□ -2.06
YIR043CYIR043C GTT2Q12390 233 aa2.2□□□□□ -2.06
YIR043CYIR043C YCL001W-BQ96VH2 84 aa2.2□□□□□ -2.06
YIR043CYIR043C SSN2P38931 1420 aa2.19□□□□□ -2.06
YIR043CYIR043C ERV14P53173 138 aa2.19□□□□□ -2.06
YIR043CYIR043C YOR072WQ08486 104 aa2.19□□□□□ -2.06
YIR043CYIR043C SEC59P20048 519 aa2.18□□□□□ -2.06
YIR043CYIR043C YJL009WP47078 108 aa2.18□□□□□ -2.06
YIR043CYIR043C YOR376W-AQ3E805 51 aa2.18□□□□□ -2.06
YIR043CYIR043C KTI11Q3E840 82 aa2.18□□□□□ -2.06
YIR043CYIR043C ROM2P51862 1356 aaKnown RBP2.18□□□□□ -2.06
YIR043CYIR043C AIM18P38884 321 aa2.17□□□□□ -2.06
YIR043CYIR043C MGR2Q02889 113 aa2.17□□□□□ -2.06
YIR043CYIR043C YER039C-AP0CD97 72 aa2.16□□□□□ -2.06
YIR043CYIR043C RPS12P48589 143 aaKnown RBP2.16□□□□□ -2.06
YIR043CYIR043C ZEO1Q08245 113 aa2.16□□□□□ -2.06
YIR043CYIR043C RPS22AP0C0W1 130 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms