RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C SPO73P40031 143 aa2.35□□□□□ -2.03
MSM1YGR171C YJL144WP47009 104 aa2.35□□□□□ -2.03
MSM1YGR171C DAN1P47178 298 aa2.35□□□□□ -2.03
MSM1YGR171C THG1P53215 237 aaKnown RBP2.35□□□□□ -2.03
MSM1YGR171C RPL26BP53221 127 aaKnown RBP2.35□□□□□ -2.03
MSM1YGR171C UPS3Q04006 179 aa2.35□□□□□ -2.03
MSM1YGR171C YDR029WQ12111 104 aa2.35□□□□□ -2.03
MSM1YGR171C MDH2P22133 377 aa2.34□□□□□ -2.03
MSM1YGR171C TMA19P35691 167 aaKnown RBP2.34□□□□□ -2.03
MSM1YGR171C LSM2P38203 95 aaKnown RBP2.34□□□□□ -2.03
MSM1YGR171C YML079WQ03629 201 aa2.34□□□□□ -2.03
MSM1YGR171C FIT1Q04433 528 aa2.34□□□□□ -2.03
MSM1YGR171C YPR174CQ06616 221 aaPredicted RBP2.34□□□□□ -2.03
MSM1YGR171C MED11Q99278 115 aa2.34□□□□□ -2.03
MSM1YGR171C SRB8P25648 1427 aa2.34□□□□□ -2.03
MSM1YGR171C FUN14P18411 198 aa2.34□□□□□ -2.04
MSM1YGR171C DDR48P18899 430 aaKnown RBP2.34□□□□□ -2.04
MSM1YGR171C ERG25P53045 309 aa2.34□□□□□ -2.04
MSM1YGR171C YMR090WQ04304 227 aaKnown RBP2.34□□□□□ -2.04
MSM1YGR171C RDS3Q06835 107 aaPredicted RBP2.34□□□□□ -2.04
MSM1YGR171C FIT3Q08907 204 aa2.34□□□□□ -2.04
MSM1YGR171C PDR10P51533 1564 aa2.33□□□□□ -2.04
MSM1YGR171C YLR236CA0A023PZG4 107 aa2.33□□□□□ -2.04
MSM1YGR171C YNR077CP53758 84 aa2.33□□□□□ -2.04
MSM1YGR171C YMR082CQ04276 118 aa2.33□□□□□ -2.04
MSM1YGR171C RIM9Q04734 239 aa2.33□□□□□ -2.04
MSM1YGR171C GEA1P47102 1408 aaPredicted RBP2.33□□□□□ -2.04
MSM1YGR171C INO4P13902 151 aa2.32□□□□□ -2.04
MSM1YGR171C YGL010WP25338 174 aa2.32□□□□□ -2.04
MSM1YGR171C SSS1P35179 80 aa2.32□□□□□ -2.04
MSM1YGR171C SEN15Q04675 128 aa2.32□□□□□ -2.04
MSM1YGR171C YPR013CQ12145 317 aa2.32□□□□□ -2.04
MSM1YGR171C YOR381W-AQ3E804 55 aa2.32□□□□□ -2.04
MSM1YGR171C YOR376W-AQ3E805 51 aa2.32□□□□□ -2.04
MSM1YGR171C SCS22Q6Q595 175 aa2.32□□□□□ -2.04
MSM1YGR171C KSH1Q8TGJ3 72 aa2.32□□□□□ -2.04
MSM1YGR171C VPS15P22219 1454 aa2.32□□□□□ -2.04
MSM1YGR171C SIN3P22579 1536 aa2.32□□□□□ -2.04
MSM1YGR171C ECM12O13529 151 aa2.31□□□□□ -2.04
MSM1YGR171C YCR050CP25630 102 aa2.31□□□□□ -2.04
MSM1YGR171C YCR099CP25657 155 aa2.31□□□□□ -2.04
MSM1YGR171C MRPL11P36521 249 aaPredicted RBP2.31□□□□□ -2.04
MSM1YGR171C PHO88P38264 188 aaPredicted RBP2.31□□□□□ -2.04
MSM1YGR171C FLX1P40464 311 aa2.31□□□□□ -2.04
MSM1YGR171C YJR146WP47174 117 aa2.31□□□□□ -2.04
MSM1YGR171C BOL2P53082 120 aa2.31□□□□□ -2.04
MSM1YGR171C HRT1Q08273 121 aa2.31□□□□□ -2.04
MSM1YGR171C YOS1Q3E834 85 aa2.31□□□□□ -2.04
MSM1YGR171C TY1B-BRQ12193 1756 aa2.31□□□□□ -2.04
MSM1YGR171C SVP26P38869 228 aa2.31□□□□□ -2.04
MSM1YGR171C SNN1P48232 102 aa2.31□□□□□ -2.04
MSM1YGR171C RAF1Q06891 181 aa2.31□□□□□ -2.04
MSM1YGR171C ATG41Q12048 136 aa2.31□□□□□ -2.04
MSM1YGR171C YCF1P39109 1515 aaKnown RBP2.31□□□□□ -2.04
MSM1YGR171C NUP159P40477 1460 aa2.3□□□□□ -2.04
MSM1YGR171C SWR1Q05471 1514 aa2.3□□□□□ -2.04
MSM1YGR171C YOL162WP0CF19 215 aa2.3□□□□□ -2.04
MSM1YGR171C CWP2P43497 92 aa2.3□□□□□ -2.04
MSM1YGR171C YFL065CP43539 102 aa2.3□□□□□ -2.04
MSM1YGR171C YHP1Q04116 353 aa2.3□□□□□ -2.04
MSM1YGR171C YPR203WQ08994 102 aa2.3□□□□□ -2.04
MSM1YGR171C SSK2P53599 1579 aa2.3□□□□□ -2.04
MSM1YGR171C TY1B-NL2Q99337 1749 aaKnown RBP2.29□□□□□ -2.04
MSM1YGR171C IQG1Q12280 1495 aa2.29□□□□□ -2.04
MSM1YGR171C PAI3P01094 68 aa2.29□□□□□ -2.04
MSM1YGR171C UBC4P15731 148 aa2.29□□□□□ -2.04
MSM1YGR171C EMC5P40540 141 aa2.29□□□□□ -2.04
MSM1YGR171C MSL1P40567 111 aaPredicted RBP2.29□□□□□ -2.04
MSM1YGR171C CSI2Q08054 341 aa2.29□□□□□ -2.04
MSM1YGR171C VPS68Q12016 184 aa2.29□□□□□ -2.04
MSM1YGR171C MON2P48563 1636 aaPredicted RBP2.29□□□□□ -2.04
MSM1YGR171C YPK9Q12697 1472 aa2.29□□□□□ -2.04
MSM1YGR171C MDM35O60200 86 aa2.28□□□□□ -2.04
MSM1YGR171C YAL064WP39711 94 aa2.28□□□□□ -2.04
MSM1YGR171C CYB5P40312 120 aa2.28□□□□□ -2.04
MSM1YGR171C YGR269WP40326 108 aa2.28□□□□□ -2.04
MSM1YGR171C YFR035CP43608 114 aa2.28□□□□□ -2.04
MSM1YGR171C YDL157CQ12082 118 aa2.28□□□□□ -2.04
MSM1YGR171C TY1B-DR5P0C2I2 1755 aa2.28□□□□□ -2.04
MSM1YGR171C TY1B-DR6P0C2I3 1755 aa2.28□□□□□ -2.04
MSM1YGR171C TY1B-LR2P0C2I5 1755 aa2.28□□□□□ -2.04
MSM1YGR171C TY1B-LR3P0C2I6 1755 aaKnown RBP2.28□□□□□ -2.04
MSM1YGR171C TY1B-PR1P0C2I9 1755 aaKnown RBP2.28□□□□□ -2.04
MSM1YGR171C TY1B-PR3P0C2J1 1755 aaKnown RBP2.28□□□□□ -2.04
MSM1YGR171C TY1B-JR1P47098 1755 aa2.28□□□□□ -2.04
MSM1YGR171C TY1B-ML2Q03434 1755 aaKnown RBP2.28□□□□□ -2.04
MSM1YGR171C TY1B-ER1Q03612 1755 aa2.28□□□□□ -2.04
MSM1YGR171C TY1B-ML1Q04711 1755 aaKnown RBP2.28□□□□□ -2.04
MSM1YGR171C TY1B-GR2Q12269 1755 aa2.28□□□□□ -2.04
MSM1YGR171C TY1B-OLQ12273 1755 aa2.28□□□□□ -2.04
MSM1YGR171C TY1B-PLQ12414 1755 aaKnown RBP2.28□□□□□ -2.04
MSM1YGR171C DNA2P38859 1522 aa2.28□□□□□ -2.04
MSM1YGR171C SEC11P15367 167 aa2.28□□□□□ -2.05
MSM1YGR171C MAK31P23059 88 aa2.28□□□□□ -2.05
MSM1YGR171C EMC6Q12431 108 aa2.28□□□□□ -2.05
MSM1YGR171C COA6Q3E846 104 aa2.28□□□□□ -2.05
MSM1YGR171C MIC10Q96VH5 97 aa2.28□□□□□ -2.05
MSM1YGR171C TDA2P40045 126 aa2.27□□□□□ -2.05
MSM1YGR171C DAD4P69851 72 aa2.27□□□□□ -2.05
MSM1YGR171C MET31Q03081 177 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms