RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeastyeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC4YGR002C EST3Q03096 181 aa2.25□□□□□ -2.05
SWC4YGR002C FCF1Q05498 189 aaPredicted RBP2.25□□□□□ -2.05
SWC4YGR002C YOL131WQ08270 108 aa2.25□□□□□ -2.05
SWC4YGR002C SLM3Q12093 417 aa2.25□□□□□ -2.05
SWC4YGR002C YDL211CQ12121 372 aa2.25□□□□□ -2.05
SWC4YGR002C DFM1Q12743 341 aaKnown RBP2.25□□□□□ -2.05
SWC4YGR002C VMA9Q3E7B6 73 aa2.25□□□□□ -2.05
SWC4YGR002C YOR020W-AQ3E824 90 aa2.25□□□□□ -2.05
SWC4YGR002C YIL134C-AQ45U18 67 aa2.25□□□□□ -2.05
SWC4YGR002C NTE1Q04958 1679 aa2.25□□□□□ -2.05
SWC4YGR002C ARO1P08566 1588 aaKnown RBP2.25□□□□□ -2.05
SWC4YGR002C YRF1-3P0CX14 1859 aa2.25□□□□□ -2.05
SWC4YGR002C YRF1-7P0CX15 1859 aa2.25□□□□□ -2.05
SWC4YGR002C YRF1-6P53819 1859 aa2.25□□□□□ -2.05
SWC4YGR002C POR1P04840 283 aaKnown RBP2.25□□□□□ -2.05
SWC4YGR002C URA5P13298 226 aaKnown RBP2.25□□□□□ -2.05
SWC4YGR002C BET1P22804 142 aa2.25□□□□□ -2.05
SWC4YGR002C MRS4P23500 304 aa2.25□□□□□ -2.05
SWC4YGR002C SMP1P38128 452 aa2.25□□□□□ -2.05
SWC4YGR002C ATG8P38182 117 aaRIP-Chip data2.25□□□□□ -2.05not detected
SWC4YGR002C YHL018WP38744 120 aaPredicted RBP2.25□□□□□ -2.05
SWC4YGR002C SNF11P38956 169 aa2.25□□□□□ -2.05
SWC4YGR002C GGC1P38988 300 aa2.25□□□□□ -2.05
SWC4YGR002C TDA2P40045 126 aa2.25□□□□□ -2.05
SWC4YGR002C YER134CP40081 178 aa2.25□□□□□ -2.05
SWC4YGR002C SMX2P40204 77 aaKnown RBP2.25□□□□□ -2.05
SWC4YGR002C SMD3P43321 101 aaKnown RBP2.25□□□□□ -2.05
SWC4YGR002C GPI19Q04082 140 aa2.25□□□□□ -2.05
SWC4YGR002C MIX14Q04341 121 aa2.25□□□□□ -2.05
SWC4YGR002C YLR363W-AQ3E747 85 aa2.25□□□□□ -2.05
SWC4YGR002C YBL008W-AQ3E821 79 aa2.25□□□□□ -2.05
SWC4YGR002C YOS1Q3E834 85 aa2.25□□□□□ -2.05
SWC4YGR002C YNR034W-AQ3E841 98 aa2.25□□□□□ -2.05
SWC4YGR002C YHR214C-EQ8TGK0 99 aa2.25□□□□□ -2.05
SWC4YGR002C ENV10Q99382 181 aa2.25□□□□□ -2.05
SWC4YGR002C ATG2P53855 1592 aa2.24□□□□□ -2.05
SWC4YGR002C YOL162WP0CF19 215 aa2.24□□□□□ -2.05
SWC4YGR002C UBC4P15731 148 aa2.24□□□□□ -2.05
SWC4YGR002C YCR085WP25650 117 aa2.24□□□□□ -2.05
SWC4YGR002C TOM6P33448 61 aa2.24□□□□□ -2.05
SWC4YGR002C HTD2P38790 280 aaKnown RBP2.24□□□□□ -2.05
SWC4YGR002C YHR138CP38841 114 aaPredicted RBP2.24□□□□□ -2.05
SWC4YGR002C EDC2P40023 145 aaPredicted RBP2.24□□□□□ -2.05
SWC4YGR002C NSA2P40078 261 aaKnown RBP2.24□□□□□ -2.05
SWC4YGR002C CCS1P40202 249 aaKnown RBP2.24□□□□□ -2.05
SWC4YGR002C GAT4P40569 121 aa2.24□□□□□ -2.05
SWC4YGR002C DSK2P48510 373 aa2.24□□□□□ -2.05
SWC4YGR002C POP3P53833 195 aaPredicted RBP2.24□□□□□ -2.05
SWC4YGR002C LPP1Q04396 274 aa2.24□□□□□ -2.05
SWC4YGR002C SEN15Q04675 128 aa2.24□□□□□ -2.05
SWC4YGR002C YMR252CQ04814 134 aa2.24□□□□□ -2.05
SWC4YGR002C PRM3Q08931 133 aa2.24□□□□□ -2.05
SWC4YGR002C KSH1Q8TGJ3 72 aa2.24□□□□□ -2.05
SWC4YGR002C DOP1Q03921 1698 aa2.23□□□□□ -2.05
SWC4YGR002C SPS100P13130 326 aa2.23□□□□□ -2.05
SWC4YGR002C KRE1P17260 313 aa2.23□□□□□ -2.05
SWC4YGR002C YRA2P36036 203 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
SWC4YGR002C ECM34P38728 170 aa2.23□□□□□ -2.05
SWC4YGR002C GCV3P39726 170 aaPredicted RBP2.23□□□□□ -2.05
SWC4YGR002C FLX1P40464 311 aa2.23□□□□□ -2.05
SWC4YGR002C ELP6Q04868 273 aa2.23□□□□□ -2.05
SWC4YGR002C PAN1P32521 1480 aa2.22□□□□□ -2.05
SWC4YGR002C YCR050CP25630 102 aa2.22□□□□□ -2.05
SWC4YGR002C PAM17P36147 197 aa2.22□□□□□ -2.05
SWC4YGR002C PAU15P40585 124 aa2.22□□□□□ -2.05
SWC4YGR002C YJL218WP40892 196 aaKnown RBP2.22□□□□□ -2.05
SWC4YGR002C CWP2P43497 92 aa2.22□□□□□ -2.05
SWC4YGR002C YFL012WP43580 148 aa2.22□□□□□ -2.05
SWC4YGR002C SMD1Q02260 146 aaPredicted RBP2.22□□□□□ -2.05
SWC4YGR002C SYM1Q06563 197 aa2.22□□□□□ -2.05
SWC4YGR002C DAD1Q12248 94 aa2.22□□□□□ -2.05
SWC4YGR002C EMC6Q12431 108 aa2.22□□□□□ -2.05
SWC4YGR002C MHF1Q3E835 90 aa2.22□□□□□ -2.05
SWC4YGR002C TDA8Q6B2U8 126 aa2.22□□□□□ -2.05
SWC4YGR002C YLR365WQ7LIF2 110 aa2.22□□□□□ -2.05
SWC4YGR002C YML100W-AQ8TGT0 57 aa2.22□□□□□ -2.05
SWC4YGR002C ATG40Q99325 256 aa2.22□□□□□ -2.05
SWC4YGR002C IMP1P28627 190 aa2.21□□□□□ -2.06
SWC4YGR002C ERG2P32352 222 aa2.21□□□□□ -2.06
SWC4YGR002C CSH1P38287 376 aa2.21□□□□□ -2.06
SWC4YGR002C SVP26P38869 228 aa2.21□□□□□ -2.06
SWC4YGR002C KNH1P50112 268 aa2.21□□□□□ -2.06
SWC4YGR002C MRPS8Q03799 155 aa2.21□□□□□ -2.06
SWC4YGR002C CSI2Q08054 341 aa2.21□□□□□ -2.06
SWC4YGR002C YOR385WQ08909 290 aa2.21□□□□□ -2.06
SWC4YGR002C YOR015WQ12169 119 aa2.21□□□□□ -2.06
SWC4YGR002C YIL102C-AQ2V2P5 75 aa2.21□□□□□ -2.06
SWC4YGR002C RPS25AQ3E792 108 aaPredicted RBP2.21□□□□□ -2.06
SWC4YGR002C SCS22Q6Q595 175 aa2.21□□□□□ -2.06
SWC4YGR002C RPS19AP07280 144 aaKnown RBP2.2□□□□□ -2.06
SWC4YGR002C RPS19BP07281 144 aaPredicted RBP2.2□□□□□ -2.06
SWC4YGR002C PAU19P0CE85 124 aa2.2□□□□□ -2.06
SWC4YGR002C PAU21P0CE86 164 aa2.2□□□□□ -2.06
SWC4YGR002C PAU22P0CE87 164 aa2.2□□□□□ -2.06
SWC4YGR002C MDH2P22133 377 aa2.2□□□□□ -2.06
SWC4YGR002C PAU3P25610 124 aa2.2□□□□□ -2.06
SWC4YGR002C MIG1P27705 504 aa2.2□□□□□ -2.06
SWC4YGR002C TRS20P38334 175 aa2.2□□□□□ -2.06
SWC4YGR002C PET8P38921 284 aa2.2□□□□□ -2.06
SWC4YGR002C YAR068WP39564 161 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms