RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCW11	YGL028C	YRF1-3	P0CX14	1859 aa		0.34	□□□□□ -2.36
SCW11	YGL028C	YRF1-7	P0CX15	1859 aa		0.34	□□□□□ -2.36
SCW11	YGL028C	BNI1	P41832	1953 aa		0.33	□□□□□ -2.36
SCW11	YGL028C	YOR1	P53049	1477 aa		0.33	□□□□□ -2.36
SCW11	YGL028C	YHR213W	P0CI67	198 aa		0.33	□□□□□ -2.36
SCW11	YGL028C	FUN14	P18411	198 aa		0.33	□□□□□ -2.36
SCW11	YGL028C	SUI1	P32911	108 aa	Known RBP	0.33	□□□□□ -2.36
SCW11	YGL028C	SRL3	P36167	246 aa		0.33	□□□□□ -2.36
SCW11	YGL028C	LST8	P41318	303 aa		0.33	□□□□□ -2.36
SCW11	YGL028C	LSM8	P47093	109 aa	Known RBP	0.33	□□□□□ -2.36
SCW11	YGL028C	YGL149W	P53116	101 aa		0.33	□□□□□ -2.36
SCW11	YGL028C	YDR366C	P87287	132 aa		0.33	□□□□□ -2.36
SCW11	YGL028C	COA4	Q05809	96 aa		0.33	□□□□□ -2.36
SCW11	YGL028C	NAT5	Q08689	176 aa		0.33	□□□□□ -2.36
SCW11	YGL028C	HUG1	Q6Q5K6	68 aa		0.33	□□□□□ -2.36
SCW11	YGL028C	SFT2	P38166	215 aa		0.32	□□□□□ -2.36
SCW11	YGL028C	YJL009W	P47078	108 aa		0.32	□□□□□ -2.36
SCW11	YGL028C	RBL2	P48606	106 aa	Known RBP	0.32	□□□□□ -2.36
SCW11	YGL028C	EFM5	P53200	248 aa	Known RBP	0.32	□□□□□ -2.36
SCW11	YGL028C	COF1	Q03048	143 aa	Known RBP	0.32	□□□□□ -2.36
SCW11	YGL028C	YLR307C-A	Q3E825	87 aa		0.32	□□□□□ -2.36
SCW11	YGL028C	TY1B-H	O13535	1793 aa		0.32	□□□□□ -2.36
SCW11	YGL028C	ANB1	P19211	157 aa		0.31	□□□□□ -2.36
SCW11	YGL028C	YBR013C	P38215	129 aa		0.31	□□□□□ -2.36
SCW11	YGL028C	MIC27	P50945	234 aa		0.31	□□□□□ -2.36
SCW11	YGL028C	EMC4	P53073	190 aa		0.31	□□□□□ -2.36
SCW11	YGL028C	YMR321C	Q04898	105 aa		0.31	□□□□□ -2.36
SCW11	YGL028C	RAF1	Q06891	181 aa		0.31	□□□□□ -2.36
SCW11	YGL028C	DDP1	Q99321	188 aa	Known RBP	0.31	□□□□□ -2.36
SCW11	YGL028C	YLR157W-E	P0CF00	54 aa		0.31	□□□□□ -2.36
SCW11	YGL028C	RPL14A	P36105	138 aa	Known RBP	0.31	□□□□□ -2.36
SCW11	YGL028C	RPL14B	P38754	138 aa	Known RBP	0.31	□□□□□ -2.36
SCW11	YGL028C	BRP1	P53194	125 aa		0.31	□□□□□ -2.36
SCW11	YGL028C	YGR039W	P53225	103 aa		0.31	□□□□□ -2.36
SCW11	YGL028C	FIT3	Q08907	204 aa		0.31	□□□□□ -2.36
SCW11	YGL028C	GTT2	Q12390	233 aa		0.31	□□□□□ -2.36
SCW11	YGL028C	YOR034C-A	Q3E735	80 aa		0.31	□□□□□ -2.36
SCW11	YGL028C	COA6	Q3E846	104 aa		0.31	□□□□□ -2.36
SCW11	YGL028C	BRR2	P32639	2163 aa	Known RBP	0.3	□□□□□ -2.36
SCW11	YGL028C	RTC6	O14464	93 aa		0.3	□□□□□ -2.36
SCW11	YGL028C	MRPL44	P19956	98 aa		0.3	□□□□□ -2.36
SCW11	YGL028C	RPC19	P28000	142 aa	Known RBP	0.3	□□□□□ -2.36
SCW11	YGL028C	TRS20	P38334	175 aa		0.3	□□□□□ -2.36
SCW11	YGL028C	YAL064W	P39711	94 aa		0.3	□□□□□ -2.36
SCW11	YGL028C	HPM1	P40481	377 aa		0.3	□□□□□ -2.36
SCW11	YGL028C	SPG1	P50088	95 aa		0.3	□□□□□ -2.36
SCW11	YGL028C	HHO1	P53551	258 aa		0.3	□□□□□ -2.36
SCW11	YGL028C	YLR296W	Q05898	108 aa		0.3	□□□□□ -2.36
SCW11	YGL028C	SNT2	P53127	1403 aa		0.29	□□□□□ -2.36
SCW11	YGL028C	YCR050C	P25630	102 aa		0.29	□□□□□ -2.36
SCW11	YGL028C	MRPL11	P36521	249 aa	Predicted RBP	0.29	□□□□□ -2.36
SCW11	YGL028C	QCR10	P37299	77 aa		0.29	□□□□□ -2.36
SCW11	YGL028C	LDB18	Q07887	179 aa		0.29	□□□□□ -2.36
SCW11	YGL028C	SPC3	Q12133	184 aa		0.29	□□□□□ -2.36
SCW11	YGL028C	SNF2	P22082	1703 aa		0.28	□□□□□ -2.36
SCW11	YGL028C	YSF3	P0C074	85 aa	Predicted RBP	0.28	□□□□□ -2.36
SCW11	YGL028C	AIM18	P38884	321 aa		0.28	□□□□□ -2.36
SCW11	YGL028C	ELC1	Q03071	99 aa		0.28	□□□□□ -2.36
SCW11	YGL028C	TVP18	Q04767	167 aa		0.28	□□□□□ -2.36
SCW11	YGL028C	MED11	Q99278	115 aa		0.28	□□□□□ -2.36
SCW11	YGL028C	FAS2	P19097	1887 aa	Known RBP	0.28	□□□□□ -2.37
SCW11	YGL028C	SEC16	P48415	2195 aa	Known RBP	0.28	□□□□□ -2.37
SCW11	YGL028C	MYO1	P08964	1928 aa		0.28	□□□□□ -2.37
SCW11	YGL028C	PFY1	P07274	126 aa		0.27	□□□□□ -2.37
SCW11	YGL028C	PAU21	P0CE86	164 aa		0.27	□□□□□ -2.37
SCW11	YGL028C	PAU22	P0CE87	164 aa		0.27	□□□□□ -2.37
SCW11	YGL028C	HAP3	P13434	144 aa		0.27	□□□□□ -2.37
SCW11	YGL028C	PRS3	P38689	320 aa	Known RBP	0.27	□□□□□ -2.37
SCW11	YGL028C	HSP10	P38910	106 aa		0.27	□□□□□ -2.37
SCW11	YGL028C	SDH7	Q04401	133 aa		0.27	□□□□□ -2.37
SCW11	YGL028C	SEC7	P11075	2009 aa	Known RBP	0.27	□□□□□ -2.37
SCW11	YGL028C	CSN9	Q03981	162 aa		0.27	□□□□□ -2.37
SCW11	YGL028C	FCF2	Q12035	217 aa	Predicted RBP	0.27	□□□□□ -2.37
SCW11	YGL028C	SUA7	P29055	345 aa	Predicted RBP	0.26	□□□□□ -2.37
SCW11	YGL028C	HYM1	P32464	399 aa		0.26	□□□□□ -2.37
SCW11	YGL028C	POR2	P40478	281 aa		0.26	□□□□□ -2.37
SCW11	YGL028C	URB1	P34241	1764 aa	Known RBP	0.25	□□□□□ -2.37
SCW11	YGL028C	MRPL31	P14063	131 aa	Predicted RBP	0.25	□□□□□ -2.37
SCW11	YGL028C	GSP1	P32835	219 aa	Known RBP	0.25	□□□□□ -2.37
SCW11	YGL028C	YAP3	P38749	330 aa		0.25	□□□□□ -2.37
SCW11	YGL028C	GIM4	P40005	111 aa	Known RBP	0.25	□□□□□ -2.37
SCW11	YGL028C	YIL163C	P40448	117 aa		0.25	□□□□□ -2.37
SCW11	YGL028C	YGR017W	P53210	297 aa		0.25	□□□□□ -2.37
SCW11	YGL028C	ATP14	Q12349	124 aa		0.25	□□□□□ -2.37
SCW11	YGL028C	TAO3	P40468	2376 aa		0.25	□□□□□ -2.37
SCW11	YGL028C	SRX1	P36077	127 aa		0.24	□□□□□ -2.37
SCW11	YGL028C	YLR194C	Q05777	254 aa		0.24	□□□□□ -2.37
SCW11	YGL028C	HPA2	Q06592	156 aa		0.24	□□□□□ -2.37
SCW11	YGL028C	ENV10	Q99382	181 aa		0.24	□□□□□ -2.37
SCW11	YGL028C	RPL36B	O14455	100 aa	Known RBP	0.24	□□□□□ -2.37
SCW11	YGL028C	RPL36A	P05745	100 aa	Predicted RBP	0.24	□□□□□ -2.37
SCW11	YGL028C	PHS1	P40857	217 aa		0.24	□□□□□ -2.37
SCW11	YGL028C	ERV14	P53173	138 aa		0.24	□□□□□ -2.37
SCW11	YGL028C	EMP24	P32803	203 aa	Known RBP	0.23	□□□□□ -2.37
SCW11	YGL028C	YFR035C	P43608	114 aa		0.23	□□□□□ -2.37
SCW11	YGL028C	YJR128W	P47162	119 aa		0.23	□□□□□ -2.37
SCW11	YGL028C	ARL3	Q02804	198 aa		0.23	□□□□□ -2.37
SCW11	YGL028C	YNL277W-A	Q3E7Z0	62 aa		0.23	□□□□□ -2.37
SCW11	YGL028C	AUA1	P32450	94 aa		0.22	□□□□□ -2.37
SCW11	YGL028C	YKL044W	P36092	106 aa		0.22	□□□□□ -2.37

Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms