RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W UBR1P19812 1950 aa3.07□□□□□ -1.92
DEG1YFL001W DDI2P0CH63 225 aa3.06□□□□□ -1.92
DEG1YFL001W DDI3P0CH64 225 aa3.06□□□□□ -1.92
DEG1YFL001W TIR1P10863 254 aa3.06□□□□□ -1.92
DEG1YFL001W CSH1P38287 376 aa3.06□□□□□ -1.92
DEG1YFL001W YBR220CP38318 560 aa3.06□□□□□ -1.92
DEG1YFL001W YNL200CP40165 246 aaKnown RBP3.06□□□□□ -1.92
DEG1YFL001W AYR1P40471 297 aa3.06□□□□□ -1.92
DEG1YFL001W APQ12P40532 138 aa3.06□□□□□ -1.92
DEG1YFL001W ERG25P53045 309 aa3.06□□□□□ -1.92
DEG1YFL001W RAS2P01120 322 aaKnown RBP3.05□□□□□ -1.92
DEG1YFL001W UBI4P0CG63 381 aaKnown RBP3.05□□□□□ -1.92
DEG1YFL001W SEC59P20048 519 aa3.05□□□□□ -1.92
DEG1YFL001W PTC1P35182 281 aa3.05□□□□□ -1.92
DEG1YFL001W YHR022CP38763 256 aa3.05□□□□□ -1.92
DEG1YFL001W YFR054CP43622 192 aa3.05□□□□□ -1.92
DEG1YFL001W MET31Q03081 177 aa3.05□□□□□ -1.92
DEG1YFL001W YMR295CQ03559 197 aa3.05□□□□□ -1.92
DEG1YFL001W YPR202WQ08993 238 aa3.05□□□□□ -1.92
DEG1YFL001W FCF2Q12035 217 aaPredicted RBP3.05□□□□□ -1.92
DEG1YFL001W YLR236CA0A023PZG4 107 aa3.04□□□□□ -1.92
DEG1YFL001W YBR209WP38311 105 aa3.04□□□□□ -1.92
DEG1YFL001W YJR015WP47090 510 aa3.04□□□□□ -1.92
DEG1YFL001W CYT2Q00873 224 aa3.04□□□□□ -1.92
DEG1YFL001W TMA23Q03525 211 aa3.04□□□□□ -1.92
DEG1YFL001W YDR391CQ04170 232 aa3.04□□□□□ -1.92
DEG1YFL001W SHH3Q04487 196 aa3.04□□□□□ -1.92
DEG1YFL001W SEN1Q00416 2231 aaKnown RBP3.03□□□□□ -1.92
DEG1YFL001W SPS2P08459 502 aa3.03□□□□□ -1.92
DEG1YFL001W UGX2P32772 223 aa3.03□□□□□ -1.92
DEG1YFL001W FZF1P32805 299 aa3.03□□□□□ -1.92
DEG1YFL001W RPS20P38701 121 aaKnown RBP3.03□□□□□ -1.92
DEG1YFL001W SPC25P40014 221 aa3.03□□□□□ -1.92
DEG1YFL001W NSA2P40078 261 aaKnown RBP3.03□□□□□ -1.92
DEG1YFL001W CUP9P41817 306 aa3.03□□□□□ -1.92
DEG1YFL001W GLC8P41818 229 aa3.03□□□□□ -1.92
DEG1YFL001W HHO1P53551 258 aa3.03□□□□□ -1.92
DEG1YFL001W RIB3Q99258 208 aa3.03□□□□□ -1.92
DEG1YFL001W PHO85P17157 305 aa3.02□□□□□ -1.93
DEG1YFL001W LHP1P33399 275 aaKnown RBP3.02□□□□□ -1.93
DEG1YFL001W FYV4P38783 130 aaPredicted RBP3.02□□□□□ -1.93
DEG1YFL001W HHT1P61830 136 aa3.02□□□□□ -1.93
DEG1YFL001W AIM11P87275 137 aa3.02□□□□□ -1.93
DEG1YFL001W YKR005CQ02203 525 aa3.02□□□□□ -1.93
DEG1YFL001W FYV12Q08559 129 aa3.02□□□□□ -1.93
DEG1YFL001W DAN1P47178 298 aa3.01□□□□□ -1.93
DEG1YFL001W RGM1Q00453 211 aa3.01□□□□□ -1.93
DEG1YFL001W COF1Q03048 143 aaKnown RBP3.01□□□□□ -1.93
DEG1YFL001W DIG2Q03373 323 aaKnown RBP3.01□□□□□ -1.93
DEG1YFL001W AIM36Q03798 255 aa3.01□□□□□ -1.93
DEG1YFL001W GAL83Q04739 417 aa3.01□□□□□ -1.93
DEG1YFL001W ATP20Q12233 115 aa3.01□□□□□ -1.93
DEG1YFL001W POL2P21951 2222 aaKnown RBP3.01□□□□□ -1.93
DEG1YFL001W RPL2AP0CX45 254 aaKnown RBP3□□□□□ -1.93
DEG1YFL001W RPL2BP0CX46 254 aaKnown RBP3□□□□□ -1.93
DEG1YFL001W PRE1P22141 198 aaKnown RBP3□□□□□ -1.93
DEG1YFL001W GLR1P41921 483 aaKnown RBP3□□□□□ -1.93
DEG1YFL001W NSE4P43124 402 aa3□□□□□ -1.93
DEG1YFL001W YGR039WP53225 103 aa3□□□□□ -1.93
DEG1YFL001W YNL033WP53964 284 aa3□□□□□ -1.93
DEG1YFL001W YNL019CP53975 284 aa3□□□□□ -1.93
DEG1YFL001W YDR366CP87287 132 aa3□□□□□ -1.93
DEG1YFL001W CUE4Q04201 117 aaPredicted RBP3□□□□□ -1.93
DEG1YFL001W IRC23Q08416 157 aa3□□□□□ -1.93
DEG1YFL001W FCY1Q12178 158 aa3□□□□□ -1.93
DEG1YFL001W YKL018C-AQ3E7A7 99 aa3□□□□□ -1.93
DEG1YFL001W PAM17P36147 197 aa2.99□□□□□ -1.93
DEG1YFL001W DLS1P40366 167 aa2.99□□□□□ -1.93
DEG1YFL001W GTT1P40582 234 aa2.99□□□□□ -1.93
DEG1YFL001W SBH1P52870 82 aa2.99□□□□□ -1.93
DEG1YFL001W YOL131WQ08270 108 aa2.99□□□□□ -1.93
DEG1YFL001W YLR118CQ12354 227 aa2.99□□□□□ -1.93
DEG1YFL001W BOL1Q3E793 110 aa2.99□□□□□ -1.93
DEG1YFL001W YLR099W-AQ3E798 87 aa2.99□□□□□ -1.93
DEG1YFL001W RPL40AP0CH08 128 aaKnown RBP2.98□□□□□ -1.93
DEG1YFL001W RPL40BP0CH09 128 aaKnown RBP2.98□□□□□ -1.93
DEG1YFL001W PDX3P38075 228 aaKnown RBP2.98□□□□□ -1.93
DEG1YFL001W DSE2P38844 325 aa2.98□□□□□ -1.93
DEG1YFL001W YIL086CP40503 102 aa2.98□□□□□ -1.93
DEG1YFL001W POP3P53833 195 aaPredicted RBP2.98□□□□□ -1.93
DEG1YFL001W MHF2Q3E829 80 aa2.98□□□□□ -1.93
DEG1YFL001W KTI11Q3E840 82 aa2.98□□□□□ -1.93
DEG1YFL001W TOR1P35169 2470 aa2.98□□□□□ -1.93
DEG1YFL001W VAR1P02381 398 aa2.97□□□□□ -1.93
DEG1YFL001W RPL30P14120 105 aaKnown RBP2.97□□□□□ -1.93
DEG1YFL001W STP22P25604 385 aa2.97□□□□□ -1.93
DEG1YFL001W ECM31P38122 312 aa2.97□□□□□ -1.93
DEG1YFL001W YEA6P39953 335 aa2.97□□□□□ -1.93
DEG1YFL001W YPL073CP40323 161 aa2.97□□□□□ -1.93
DEG1YFL001W KNH1P50112 268 aa2.97□□□□□ -1.93
DEG1YFL001W SAY1P53324 424 aa2.97□□□□□ -1.93
DEG1YFL001W VPS28Q02767 242 aa2.97□□□□□ -1.93
DEG1YFL001W ELC1Q03071 99 aa2.97□□□□□ -1.93
DEG1YFL001W GPI11Q06636 219 aa2.97□□□□□ -1.93
DEG1YFL001W RAD28Q12021 506 aa2.97□□□□□ -1.93
DEG1YFL001W ACC1Q00955 2233 aaKnown RBP2.97□□□□□ -1.93
DEG1YFL001W FMP49A0A023PZB3 126 aa2.96□□□□□ -1.93
DEG1YFL001W SEC11P15367 167 aa2.96□□□□□ -1.93
DEG1YFL001W ANB1P19211 157 aa2.96□□□□□ -1.93
DEG1YFL001W HYP2P23301 157 aaKnown RBP2.96□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms