RNA–Protein interactions for RNA: YER171W

RAD3, Transcript of 5' to 3' DNA helicase, yeast

Gene RAD3, Length 2,337 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD3	YER171W	CSM4	Q08955	156 aa		4.72	□□□□□ -1.65
RAD3	YER171W	YDR215C	Q12240	137 aa		4.72	□□□□□ -1.65
RAD3	YER171W	SPO24	Q3E752	67 aa		4.72	□□□□□ -1.65
RAD3	YER171W	ADH2	P00331	348 aa	Known RBP	4.71	□□□□□ -1.66
RAD3	YER171W	MRPL31	P14063	131 aa	Predicted RBP	4.71	□□□□□ -1.66
RAD3	YER171W	VMA16	P23968	213 aa		4.71	□□□□□ -1.66
RAD3	YER171W	GSP1	P32835	219 aa	Known RBP	4.71	□□□□□ -1.66
RAD3	YER171W	GSP2	P32836	220 aa	Known RBP	4.71	□□□□□ -1.66
RAD3	YER171W	AGE2	P40529	298 aa		4.71	□□□□□ -1.66
RAD3	YER171W	AIM24	P47127	394 aa		4.71	□□□□□ -1.66
RAD3	YER171W	TMC1	Q08422	150 aa	Predicted RBP	4.71	□□□□□ -1.66
RAD3	YER171W	NAT5	Q08689	176 aa		4.71	□□□□□ -1.66
RAD3	YER171W	MEC1	P38111	2368 aa		4.71	□□□□□ -1.66
RAD3	YER171W	HTB2	P02294	131 aa		4.71	□□□□□ -1.66
RAD3	YER171W	MRPL38	P35996	138 aa	Predicted RBP	4.71	□□□□□ -1.66
RAD3	YER171W	NCA3	P46955	337 aa		4.71	□□□□□ -1.66
RAD3	YER171W	IMP2	P46972	177 aa		4.71	□□□□□ -1.66
RAD3	YER171W	DAD4	P69851	72 aa		4.71	□□□□□ -1.66
RAD3	YER171W	MHR1	Q06630	226 aa		4.71	□□□□□ -1.66
RAD3	YER171W	BPH1	P25356	2167 aa		4.7	□□□□□ -1.66
RAD3	YER171W	RPL23A	P0CX41	137 aa	Known RBP	4.7	□□□□□ -1.66
RAD3	YER171W	RPL23B	P0CX42	137 aa	Known RBP	4.7	□□□□□ -1.66
RAD3	YER171W	YKL102C	P34249	101 aa		4.7	□□□□□ -1.66
RAD3	YER171W	PAU16	P35994	123 aa		4.7	□□□□□ -1.66
RAD3	YER171W	TEM1	P38987	245 aa		4.7	□□□□□ -1.66
RAD3	YER171W	SNU13	P39990	126 aa	Known RBP	4.7	□□□□□ -1.66
RAD3	YER171W	YMR141C	P40211	102 aa		4.7	□□□□□ -1.66
RAD3	YER171W	WWM1	P43582	211 aa	Known RBP	4.7	□□□□□ -1.66
RAD3	YER171W	YFR045W	P43617	309 aa		4.7	□□□□□ -1.66
RAD3	YER171W	SAE3	P89114	91 aa		4.7	□□□□□ -1.66
RAD3	YER171W	TPT1	Q12272	230 aa	Known RBP	4.7	□□□□□ -1.66
RAD3	YER171W	WIP1	Q2V2P8	89 aa		4.7	□□□□□ -1.66
RAD3	YER171W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.7	□□□□□ -1.66
RAD3	YER171W	ATP5	P09457	212 aa		4.69	□□□□□ -1.66
RAD3	YER171W	MBB1	P39534	108 aa		4.69	□□□□□ -1.66
RAD3	YER171W	GLE2	P40066	365 aa		4.69	□□□□□ -1.66
RAD3	YER171W	PRE5	P40302	234 aa	Known RBP	4.69	□□□□□ -1.66
RAD3	YER171W	SWT21	P53873	357 aa	Predicted RBP	4.69	□□□□□ -1.66
RAD3	YER171W	PBP4	Q07362	185 aa	Known RBP	4.69	□□□□□ -1.66
RAD3	YER171W	CSI2	Q08054	341 aa		4.69	□□□□□ -1.66
RAD3	YER171W	YLR415C	O13578	112 aa		4.69	□□□□□ -1.66
RAD3	YER171W	YIR020C	P40575	100 aa		4.69	□□□□□ -1.66
RAD3	YER171W	FSF1	Q12029	327 aa	Known RBP	4.69	□□□□□ -1.66
RAD3	YER171W	DAD1	Q12248	94 aa		4.69	□□□□□ -1.66
RAD3	YER171W	YPR014C	Q6B0W2	109 aa		4.69	□□□□□ -1.66
RAD3	YER171W	URA2	P07259	2214 aa	Known RBP	4.69	□□□□□ -1.66
RAD3	YER171W	PHO85	P17157	305 aa		4.68	□□□□□ -1.66
RAD3	YER171W	SEC72	P39742	193 aa	Known RBP	4.68	□□□□□ -1.66
RAD3	YER171W	YJL027C	P47063	138 aa	Predicted RBP	4.68	□□□□□ -1.66
RAD3	YER171W	YGL118C	P53132	145 aa		4.68	□□□□□ -1.66
RAD3	YER171W	MDM10	P18409	493 aa		4.68	□□□□□ -1.66
RAD3	YER171W	PRS4	P38063	326 aa	Predicted RBP	4.68	□□□□□ -1.66
RAD3	YER171W	YNL200C	P40165	246 aa	Known RBP	4.68	□□□□□ -1.66
RAD3	YER171W	ARC18	Q05933	178 aa	Known RBP	4.68	□□□□□ -1.66
RAD3	YER171W	FEN2	P25621	512 aa	Known RBP	4.67	□□□□□ -1.66
RAD3	YER171W	MIG1	P27705	504 aa		4.67	□□□□□ -1.66
RAD3	YER171W	YHL044W	P38727	235 aa		4.67	□□□□□ -1.66
RAD3	YER171W	PAU7	P39545	55 aa		4.67	□□□□□ -1.66
RAD3	YER171W	ERG28	P40030	148 aa		4.67	□□□□□ -1.66
RAD3	YER171W	YDL186W	P48568	277 aa		4.67	□□□□□ -1.66
RAD3	YER171W	YIP3	P53633	176 aa		4.67	□□□□□ -1.66
RAD3	YER171W	TOR1	P35169	2470 aa		4.67	□□□□□ -1.66
RAD3	YER171W	CYC3	P06182	269 aa		4.67	□□□□□ -1.66
RAD3	YER171W	PRE3	P38624	215 aa		4.67	□□□□□ -1.66
RAD3	YER171W	YIL012W	P40551	113 aa		4.67	□□□□□ -1.66
RAD3	YER171W	GLC8	P41818	229 aa		4.67	□□□□□ -1.66
RAD3	YER171W	BRP1	P53194	125 aa		4.67	□□□□□ -1.66
RAD3	YER171W	THG1	P53215	237 aa	Known RBP	4.67	□□□□□ -1.66
RAD3	YER171W	CNL1	Q06333	122 aa		4.67	□□□□□ -1.66
RAD3	YER171W	UBC7	Q02159	165 aa		4.66	□□□□□ -1.66
RAD3	YER171W	TIM18	Q08749	192 aa		4.66	□□□□□ -1.66
RAD3	YER171W	RDL1	Q12305	139 aa	Known RBP	4.66	□□□□□ -1.66
RAD3	YER171W	MRPL20	P22354	195 aa	Predicted RBP	4.66	□□□□□ -1.66
RAD3	YER171W	VMA11	P32842	164 aa		4.66	□□□□□ -1.66
RAD3	YER171W	YDL157C	Q12082	118 aa		4.66	□□□□□ -1.66
RAD3	YER171W	SCS22	Q6Q595	175 aa		4.66	□□□□□ -1.66
RAD3	YER171W	MIC12	P38341	106 aa		4.65	□□□□□ -1.66
RAD3	YER171W	URM1	P40554	99 aa	Predicted RBP	4.65	□□□□□ -1.66
RAD3	YER171W	YNL092W	P53934	400 aa		4.65	□□□□□ -1.66
RAD3	YER171W	CPT1	P17898	393 aa		4.64	□□□□□ -1.67
RAD3	YER171W	POP7	P38291	140 aa		4.64	□□□□□ -1.67
RAD3	YER171W	HAC1	P41546	238 aa		4.64	□□□□□ -1.67
RAD3	YER171W	YGR017W	P53210	297 aa		4.64	□□□□□ -1.67
RAD3	YER171W	YKL183C-A	Q3E765	70 aa		4.64	□□□□□ -1.67
RAD3	YER171W	RPL27A	P0C2H6	136 aa	Known RBP	4.64	□□□□□ -1.67
RAD3	YER171W	RPL27B	P0C2H7	136 aa	Known RBP	4.64	□□□□□ -1.67
RAD3	YER171W	UIP3	P39547	235 aa		4.64	□□□□□ -1.67
RAD3	YER171W	YPI1	P43587	155 aa		4.64	□□□□□ -1.67
RAD3	YER171W	POP3	P53833	195 aa	Predicted RBP	4.64	□□□□□ -1.67
RAD3	YER171W	YOL160W	Q08321	113 aa		4.64	□□□□□ -1.67
RAD3	YER171W	SEC11	P15367	167 aa		4.63	□□□□□ -1.67
RAD3	YER171W	POR2	P40478	281 aa		4.63	□□□□□ -1.67
RAD3	YER171W	YGL230C	P53074	147 aa		4.63	□□□□□ -1.67
RAD3	YER171W	YGR219W	P53307	113 aa		4.63	□□□□□ -1.67
RAD3	YER171W	RPL15B	P54780	204 aa	Predicted RBP	4.63	□□□□□ -1.67
RAD3	YER171W	YMR181C	Q03231	154 aa		4.63	□□□□□ -1.67
RAD3	YER171W	YPL162C	Q12042	273 aa		4.63	□□□□□ -1.67
RAD3	YER171W	YLR342W-A	Q3E810	57 aa		4.63	□□□□□ -1.67
RAD3	YER171W	LCB3	P47013	409 aa		4.63	□□□□□ -1.67
RAD3	YER171W	YML122C	Q03207	126 aa		4.63	□□□□□ -1.67

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