RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C BRP1P53194 125 aa4.46□□□□□ -1.7
SEC20YDR498C DAD4P69851 72 aa4.46□□□□□ -1.7
SEC20YDR498C SCM4P32564 187 aa4.45□□□□□ -1.7
SEC20YDR498C GSP1P32835 219 aaKnown RBP4.45□□□□□ -1.7
SEC20YDR498C GSP2P32836 220 aaKnown RBP4.45□□□□□ -1.7
SEC20YDR498C YKL075CP36083 450 aa4.45□□□□□ -1.7
SEC20YDR498C PRS4P38063 326 aaPredicted RBP4.45□□□□□ -1.7
SEC20YDR498C YNL200CP40165 246 aaKnown RBP4.45□□□□□ -1.7
SEC20YDR498C FIP1P45976 327 aa4.45□□□□□ -1.7
SEC20YDR498C LSM8P47093 109 aaKnown RBP4.45□□□□□ -1.7
SEC20YDR498C VPS55P47111 140 aa4.45□□□□□ -1.7
SEC20YDR498C SDS23P53172 527 aa4.45□□□□□ -1.7
SEC20YDR498C ERV14P53173 138 aa4.45□□□□□ -1.7
SEC20YDR498C ARC18Q05933 178 aaKnown RBP4.45□□□□□ -1.7
SEC20YDR498C ATG33Q06485 197 aa4.45□□□□□ -1.7
SEC20YDR498C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
SEC20YDR498C COX2P00410 251 aa4.44□□□□□ -1.7
SEC20YDR498C YCR041WP37265 110 aa4.44□□□□□ -1.7
SEC20YDR498C AME1P38313 324 aa4.44□□□□□ -1.7
SEC20YDR498C RPB11P38902 120 aa4.44□□□□□ -1.7
SEC20YDR498C PET8P38921 284 aa4.44□□□□□ -1.7
SEC20YDR498C POR2P40478 281 aa4.44□□□□□ -1.7
SEC20YDR498C TDA4P47153 279 aa4.44□□□□□ -1.7
SEC20YDR498C DUG3P53871 357 aa4.44□□□□□ -1.7
SEC20YDR498C ATG39Q06159 398 aa4.44□□□□□ -1.7
SEC20YDR498C FSF1Q12029 327 aaKnown RBP4.44□□□□□ -1.7
SEC20YDR498C RPS22BQ3E7Y3 130 aaKnown RBP4.44□□□□□ -1.7
SEC20YDR498C RPL31BP0C2H9 113 aaKnown RBP4.43□□□□□ -1.7
SEC20YDR498C RPL23AP0CX41 137 aaKnown RBP4.43□□□□□ -1.7
SEC20YDR498C RPL23BP0CX42 137 aaKnown RBP4.43□□□□□ -1.7
SEC20YDR498C MIG1P27705 504 aa4.43□□□□□ -1.7
SEC20YDR498C ZRT1P32804 376 aa4.43□□□□□ -1.7
SEC20YDR498C YKL102CP34249 101 aa4.43□□□□□ -1.7
SEC20YDR498C YKR032WP36127 104 aa4.43□□□□□ -1.7
SEC20YDR498C CSM4Q08955 156 aa4.43□□□□□ -1.7
SEC20YDR498C YER190C-BP0CX94 160 aa4.42□□□□□ -1.7
SEC20YDR498C YEL077W-AP0CX95 160 aa4.42□□□□□ -1.7
SEC20YDR498C YGR296C-BP0CX96 160 aa4.42□□□□□ -1.7
SEC20YDR498C YPL283W-BP0CX97 160 aa4.42□□□□□ -1.7
SEC20YDR498C YPR204C-AP0CX98 160 aa4.42□□□□□ -1.7
SEC20YDR498C RPB9P27999 122 aa4.42□□□□□ -1.7
SEC20YDR498C MST28P39552 234 aa4.42□□□□□ -1.7
SEC20YDR498C YNL194CP40169 301 aa4.42□□□□□ -1.7
SEC20YDR498C TOS8P53147 276 aa4.42□□□□□ -1.7
SEC20YDR498C MST27P53176 234 aa4.42□□□□□ -1.7
SEC20YDR498C CAX4P53223 239 aa4.42□□□□□ -1.7
SEC20YDR498C CAB4P53332 305 aa4.42□□□□□ -1.7
SEC20YDR498C MOT3P54785 490 aaKnown RBP4.42□□□□□ -1.7
SEC20YDR498C SPG4Q04438 115 aa4.42□□□□□ -1.7
SEC20YDR498C SRL1Q08673 210 aa4.42□□□□□ -1.7
SEC20YDR498C YLR342W-AQ3E810 57 aa4.42□□□□□ -1.7
SEC20YDR498C TAR1Q8TGM6 124 aa4.42□□□□□ -1.7
SEC20YDR498C YOL085CQ99345 113 aa4.42□□□□□ -1.7
SEC20YDR498C MRPL20P22354 195 aaPredicted RBP4.41□□□□□ -1.7
SEC20YDR498C FEN2P25621 512 aaKnown RBP4.41□□□□□ -1.7
SEC20YDR498C MRPL11P36521 249 aaPredicted RBP4.41□□□□□ -1.7
SEC20YDR498C RPA43P46669 326 aa4.41□□□□□ -1.7
SEC20YDR498C TRI1Q05024 226 aa4.41□□□□□ -1.7
SEC20YDR498C HOR7Q05827 59 aa4.41□□□□□ -1.7
SEC20YDR498C DAD1Q12248 94 aa4.41□□□□□ -1.7
SEC20YDR498C UTP20P35194 2493 aaKnown RBP4.4□□□□□ -1.7
SEC20YDR498C MDM10P18409 493 aa4.4□□□□□ -1.71
SEC20YDR498C CMC1P36064 111 aa4.4□□□□□ -1.71
SEC20YDR498C SNF11P38956 169 aa4.4□□□□□ -1.71
SEC20YDR498C TEM1P38987 245 aa4.4□□□□□ -1.71
SEC20YDR498C PRE5P40302 234 aaKnown RBP4.4□□□□□ -1.71
SEC20YDR498C CGR1P53188 120 aa4.4□□□□□ -1.71
SEC20YDR498C YGR017WP53210 297 aa4.4□□□□□ -1.71
SEC20YDR498C RPL15BP54780 204 aaPredicted RBP4.4□□□□□ -1.71
SEC20YDR498C UBC7Q02159 165 aa4.4□□□□□ -1.71
SEC20YDR498C PRM7Q12459 698 aa4.4□□□□□ -1.71
SEC20YDR498C COA6Q3E846 104 aa4.4□□□□□ -1.71
SEC20YDR498C YHR022CP38763 256 aa4.39□□□□□ -1.71
SEC20YDR498C YPI1P43587 155 aa4.39□□□□□ -1.71
SEC20YDR498C YFR035CP43608 114 aa4.39□□□□□ -1.71
SEC20YDR498C YIL014C-AQ02598 104 aa4.39□□□□□ -1.71
SEC20YDR498C FUN14P18411 198 aa4.38□□□□□ -1.71
SEC20YDR498C YJR096WP47137 282 aa4.38□□□□□ -1.71
SEC20YDR498C THG1P53215 237 aaKnown RBP4.38□□□□□ -1.71
SEC20YDR498C PKR1Q03880 122 aaKnown RBP4.38□□□□□ -1.71
SEC20YDR498C TPT1Q12272 230 aaKnown RBP4.38□□□□□ -1.71
SEC20YDR498C YOR011W-AQ3E807 68 aa4.38□□□□□ -1.71
SEC20YDR498C RPL15AP05748 204 aaKnown RBP4.37□□□□□ -1.71
SEC20YDR498C MRPL44P19956 98 aa4.37□□□□□ -1.71
SEC20YDR498C PAU16P35994 123 aa4.37□□□□□ -1.71
SEC20YDR498C PAU7P39545 55 aa4.37□□□□□ -1.71
SEC20YDR498C SIM1P40472 476 aa4.37□□□□□ -1.71
SEC20YDR498C GPI19Q04082 140 aa4.37□□□□□ -1.71
SEC20YDR498C GTO3Q04806 366 aa4.37□□□□□ -1.71
SEC20YDR498C GEP3Q08622 556 aa4.37□□□□□ -1.71
SEC20YDR498C TIM22Q12328 207 aa4.37□□□□□ -1.71
SEC20YDR498C MRPL23Q12487 163 aaPredicted RBP4.37□□□□□ -1.71
SEC20YDR498C RPL12AP0CX53 165 aaKnown RBP4.36□□□□□ -1.71
SEC20YDR498C RPL12BP0CX54 165 aa4.36□□□□□ -1.71
SEC20YDR498C PRE1P22141 198 aaKnown RBP4.36□□□□□ -1.71
SEC20YDR498C DUO1P53168 247 aaKnown RBP4.36□□□□□ -1.71
SEC20YDR498C YIP3P53633 176 aa4.36□□□□□ -1.71
SEC20YDR498C YDL157CQ12082 118 aa4.36□□□□□ -1.71
SEC20YDR498C CCW12Q12127 133 aa4.36□□□□□ -1.71
SEC20YDR498C UTP23Q12339 254 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms