RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSN5	YDR335W	IRC23	Q08416	157 aa		0.94	□□□□□ -2.26
MSN5	YDR335W	YPL225W	Q08971	146 aa	Known RBP	0.94	□□□□□ -2.26
MSN5	YDR335W	MDN1	Q12019	4910 aa	Known RBP	0.94	□□□□□ -2.26
MSN5	YDR335W	RFS1	P38234	210 aa	Known RBP	0.94	□□□□□ -2.26
MSN5	YDR335W	TRS20	P38334	175 aa		0.94	□□□□□ -2.26
MSN5	YDR335W	YER181C	P40097	107 aa		0.94	□□□□□ -2.26
MSN5	YDR335W	YAE1	P47118	141 aa	Predicted RBP	0.94	□□□□□ -2.26
MSN5	YDR335W	UPS3	Q04006	179 aa		0.94	□□□□□ -2.26
MSN5	YDR335W	YJL197C-A	P0C5P0	93 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	TOM40	P23644	387 aa	Known RBP	0.93	□□□□□ -2.26
MSN5	YDR335W	YCR099C	P25657	155 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	YET1	P35723	206 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	MRPL15	P36523	253 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	PIR5	P46999	287 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	CIS3	P47001	227 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	YJL027C	P47063	138 aa	Predicted RBP	0.93	□□□□□ -2.26
MSN5	YDR335W	XPT1	P47165	209 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	YNR064C	P53750	290 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	RUB1	Q03919	77 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	KEI1	Q06346	221 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	RAF1	Q06891	181 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	OCA6	Q12454	224 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	SOD1	P00445	154 aa	Known RBP	0.93	□□□□□ -2.26
MSN5	YDR335W	VAR1	P02381	398 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	SPS2	P08459	502 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	SPT15	P13393	240 aa	Known RBP	0.93	□□□□□ -2.26
MSN5	YDR335W	YNR077C	P53758	84 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	YDR114C	Q04597	100 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	FCF1	Q05498	189 aa	Predicted RBP	0.93	□□□□□ -2.26
MSN5	YDR335W	YEL045C	P32616	141 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	FYV4	P38783	130 aa	Predicted RBP	0.93	□□□□□ -2.26
MSN5	YDR335W	YIR035C	P40579	254 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	FIT1	Q04433	528 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	SRL1	Q08673	210 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	GTT2	Q12390	233 aa		0.93	□□□□□ -2.26
MSN5	YDR335W	BEM2	P39960	2167 aa	Known RBP	0.93	□□□□□ -2.26
MSN5	YDR335W	SGA1	P08019	549 aa		0.92	□□□□□ -2.26
MSN5	YDR335W	UBC4	P15731	148 aa		0.92	□□□□□ -2.26
MSN5	YDR335W	ECM31	P38122	312 aa		0.92	□□□□□ -2.26
MSN5	YDR335W	UMP1	P38293	148 aa		0.92	□□□□□ -2.26
MSN5	YDR335W	YIL059C	P40520	121 aa		0.92	□□□□□ -2.26
MSN5	YDR335W	GVP36	P40531	326 aa	Known RBP	0.92	□□□□□ -2.26
MSN5	YDR335W	YFL012W	P43580	148 aa		0.92	□□□□□ -2.26
MSN5	YDR335W	GEP7	P53171	287 aa		0.92	□□□□□ -2.26
MSN5	YDR335W	SHH3	Q04487	196 aa		0.92	□□□□□ -2.26
MSN5	YDR335W	NAT3	Q06504	195 aa		0.92	□□□□□ -2.26
MSN5	YDR335W	YCL001W-B	Q96VH2	84 aa		0.92	□□□□□ -2.26
MSN5	YDR335W	HSP12	P22943	109 aa	Known RBP	0.92	□□□□□ -2.26
MSN5	YDR335W	GRX5	Q02784	150 aa		0.92	□□□□□ -2.26
MSN5	YDR335W	YMR082C	Q04276	118 aa		0.92	□□□□□ -2.26
MSN5	YDR335W	YDL157C	Q12082	118 aa		0.92	□□□□□ -2.26
MSN5	YDR335W	SRL3	P36167	246 aa		0.92	□□□□□ -2.26
MSN5	YDR335W	ANT1	Q06497	328 aa		0.92	□□□□□ -2.26
MSN5	YDR335W	EMP24	P32803	203 aa	Known RBP	0.91	□□□□□ -2.26
MSN5	YDR335W	CLB6	P32943	380 aa		0.91	□□□□□ -2.26
MSN5	YDR335W	RRT1	P38192	103 aa		0.91	□□□□□ -2.26
MSN5	YDR335W	NSE4	P43124	402 aa		0.91	□□□□□ -2.26
MSN5	YDR335W	SKI6	P46948	246 aa	Predicted RBP	0.91	□□□□□ -2.26
MSN5	YDR335W	DIE2	P50076	525 aa		0.91	□□□□□ -2.26
MSN5	YDR335W	KNH1	P50112	268 aa		0.91	□□□□□ -2.26
MSN5	YDR335W	SMT3	Q12306	101 aa	Known RBP	0.91	□□□□□ -2.26
MSN5	YDR335W	MIG1	P27705	504 aa		0.91	□□□□□ -2.26
MSN5	YDR335W	TVP18	Q04767	167 aa		0.91	□□□□□ -2.26
MSN5	YDR335W	YPR153W	Q06537	140 aa		0.91	□□□□□ -2.26
MSN5	YDR335W	YPR013C	Q12145	317 aa		0.91	□□□□□ -2.26
MSN5	YDR335W	ARO2	P28777	376 aa	Known RBP	0.91	□□□□□ -2.26
MSN5	YDR335W	MZM1	Q03429	123 aa	Predicted RBP	0.91	□□□□□ -2.26
MSN5	YDR335W	NHP10	Q03435	203 aa		0.91	□□□□□ -2.26
MSN5	YDR335W	FLO9	P39712	1322 aa		0.9	□□□□□ -2.26
MSN5	YDR335W	YNL217W	P40152	326 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	FLX1	P40464	311 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	RPL33B	P41056	107 aa	Known RBP	0.9	□□□□□ -2.27
MSN5	YDR335W	YFR045W	P43617	309 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	RSM10	Q03201	203 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	MIX14	Q04341	121 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	YMR103C	Q04436	120 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	YMR252C	Q04814	134 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	SOM1	Q05676	74 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	CSI2	Q08054	341 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	ATP20	Q12233	115 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	YCR075W-A	Q3E830	75 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	MRPL27	P36526	146 aa	Predicted RBP	0.9	□□□□□ -2.27
MSN5	YDR335W	YHL037C	P38733	133 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	ELC1	Q03071	99 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	SWC7	Q06707	132 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	YOR385W	Q08909	290 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	RAD28	Q12021	506 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	KSH1	Q8TGJ3	72 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	HSP150	P32478	413 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	RPL14A	P36105	138 aa	Known RBP	0.9	□□□□□ -2.27
MSN5	YDR335W	RPL14B	P38754	138 aa	Known RBP	0.9	□□□□□ -2.27
MSN5	YDR335W	BAT2	P47176	376 aa	Known RBP	0.9	□□□□□ -2.27
MSN5	YDR335W	BRP1	P53194	125 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	ZEO1	Q08245	113 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	YOS1	Q3E834	85 aa		0.9	□□□□□ -2.27
MSN5	YDR335W	MPC3	P53311	146 aa		0.89	□□□□□ -2.27
MSN5	YDR335W	ATP19	P81451	68 aa		0.89	□□□□□ -2.27
MSN5	YDR335W	MET31	Q03081	177 aa		0.89	□□□□□ -2.27
MSN5	YDR335W	YMR090W	Q04304	227 aa	Known RBP	0.89	□□□□□ -2.27
MSN5	YDR335W	YPR063C	Q12160	140 aa		0.89	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms